Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00387 ATGTTTGATATGGCAGAACGAAGTGGATCGTCGAGAAGGCATACATTTAATGCCGGCAATGACAATGAGGATTCTCTTCTGCGCAGCTCTTCGGCTACTTCTACTGGCGATGGATATGACAGTGATGGTTCCAATTTCGCACCTCCTACTCCTACGACCATATCAATCTCACTTCCAGCAGAACTAGCCAGTGCTATACCCCTAATTGATAAATTCCAGGTAGAGGGATTCTTAAGACTAATGCATAAGCAAATTCATTCAGCTGGAAAACGCGGATTTTTCTCTAAGAAGTCTTCAAGCCCTCCAGTTCAAGAAAAATACACATTTGAAGATATGCTGTGTTTTCAAAAGGATCCTATACCAACATCAATGCTTAAGATTAATGGCGATCTGGTTAATCGTGCTACAAAGCTATTCCAAATAATATTGAAGTACATTGGATCTGATGCTTCTGATAGAGGTCCAGCAACTTGGGATGAACGGATTGTTCTTGTTGGTAAATTGTATAAGCAAATCTTGAAGCATTCAGAACTCCGAGATGAACTATTTGTTCAAATTTCGAAACAAACTAGAAATTGTCCTGATAGGCAATACTCGATCAAAGCATGGGAGTTAATGTGTTTGTGTGCATCATCCATGCCTCCAAGCAAGGATATTGGTGGATACTTATCGGAATATGTTCACAATGTAGCGCATAATATGAGTACCGACTCTGAGATTCGAAAGCTTGCAATAAATACATTGAATTCTTTGAAGCATTCTGTGAAGGCTGGTCCTAGGCATACTATACCAGCTCGTGAGGAGATTGAAGCTCTTTTAATGGGTCGAAAGCTTACAACTATAGTCTTTTTCTTGGATGAAACTTTTGAAGAAATTACCTACGATATGGCAACCACAGTAGCTGATGCTGTTGAGGAACTTGCCAAGATTATAAAACTGTCAGCATACTCTAGCTTTAGTCTGTTTGAATATCGTAAAGTTGTTAATAGTGCGAAATCACATGACACTGGAAATGAGGAGTTTCTTGGATTGGATGATAATAAATATATTGGAGATTTGTTAGCGGAATTCAGAGCAACAAAGGACAGAAGTAAAGGAGAAATTTTGCACTGCAAGCTAATCTTTAAAAAGAAGCTTTTTCGTGAGTCAGATGAAGCTGTTGTGGACCCAATGTTTGTGCAATTGTCCTATGTTCAACTGCAACATGATTATTTATTGGGCAACTATCCTGTTGGAAGGGATGATGCTGCGCAGTTGTCTTCATTGCAAATGTTGGTTGAGAGTGGGTTCACTAGCACCCCAGAGTCAAGCACAGACTGGAATTCATTCTTAGAAAGATTCCTTCCCAGACAAATTGCGATAACTCGTGCAAAGCATGAGTGGGAACATGACATTCTTTTCCGTTATAGTTCTTTGGAACACATGACAAAAGATGATGCAAGACAACAATTTCTTCGTATATTAAGAACACTTCCTTACGGCAATTCAGTTTTCTTTAGTGTTCGCAAAATTGATGACCCCATTGGCCTTTTACCTGGACGGATAATTTTGGGAATCAACAAAAGAGGGGTTCATTTTTTCCGTCCAGTTCCGAAGGAATATTTACATTCTGCTGAGTTACGAGACATAATGCAATTTGGTAGCAGTAATACTGGGGAAGAAATTTGTGTTGCTCTTCAAACACATATAAATGATGTTATGCTGCGCCGATACTCGAAAGCCAGATCTGCCGTTAGTGGCTCAATGAATGGGGATACTCCTGACATTTTTAAGGCACCAAGTTTAGAATTACACCAGAAACAGGTTCAAGATTTGACTAAAGCTGTTCAAGAATCTCAAAGGAATGCTGATAAGTTGTCAAAAGAGATGTACGAACAACAAAAGCAAGAAGCGATAATGCAGAAAGAAATAGAAGACCTGAAAGAATCAGTGAGACATGAGAAGGAAAATTTGGCAGAGGCAATGTCTGAACTTGATAGACTCAGAACACTTGATGATGGAAAAGATAAGGCCCTTCAGGATGCATTACTGGAGAAAAAGAGTGTTGAAGCAAGATTGGCCGAGATGAGTACTCTTGTTTCAAAGAATAATTTGAAACAAGATTCAATTGGTGCACAGAATCAGGTGTTGCAAAAGCTTCAAGATGAGTTGAAACTTTGCTCCAAAGAACTAGTTGCATTCAAAGAAACTACTAAGAGACTGGTACATGAAAAAGTAAATTTGGAACAAGTGATTACTGGAATTGAGAAGAAGAAACAGGAGGAGATGGACTGTCTTCAGAGAAATTTTGAGCTAGAACGCAGACTCTTGCAGCTTAAGGTGTCAAAACTTGAAAAAAAGATGGAAGATGTTAATCAAGAATTATCTGTTGCTGAGTCGACTCTTGCAATCAAGAACACAGATATATTAGCATTGCAAAATAACTTGAAGGAGTTAGAAGATCTGAGGGAAATGAAAGCGGATATTGACCGAAAGAATGAACAAACAAACACCATTATAAAGATGCAAAGGGCCCAACTAGCTGAGTTAGAGGTGCTTTACAAGGAAGAACAAGTTTTAAGAAAACGGTATTTCAATACTATGGAAGATATGAAAGGTAAAATAAGAGTATATTGTCGACTGCGACCTCTTAATGACAAGGAATTTCTTGAAAAAGAAAAAAATGTGCTCACTTATCTTGATGAATTCACGGTTGAACATCCTTGGAAAGATGATAAACCTAAGCAACATATATACGACCGCGTATTTGATGGCACTTCCTCCCAATATTTGGTGCAATCTGCTGTAGATGGATTTAATGTCTCCATATTTGCATATGGTCAAACTGGTTCGGGAGCATACATGGTGGAGTTATACCAGGATACTCTTGTAGACCTTTTATTGCCAAAAAATGCAAAACGATTGAGATTAGAAATAAAGAAAGACACAAAGGGAATGGTAACTGTTGAAAATGTGACGATGACATCCATCTCAACTTTTGAGGAAATGAAAAGTATTATTCACCAGGGATCTGAGCAGAGGCATACAGCTGGAACTCAGATGAACGAAGAAAGCTCAAGATCTCATTTGATACTTTCAATCATTATTGAAAGTACTAATCTTCAGACTCAATCCGTCGCAAGAGGAAAGCTAAGTTTTGTGGATCTTGCTGGGTCAGAAAGAGTAAAGAAGTCTGGTTCTTCTGGTAGCCAGCTAAAAGAAGCTCAAAGCATTAACAAATCACTTTCGGCTCTCGGGGACGTTATCAATGCTTTGTCCTCTAATGGCCAACACATACCTTACAGGAATCACAAGTTAACCATGCTAATGAGTGATTCACTCGGTGGCAATGCCAAAACACTTATGTATGCAGCTAGAGTTCGATCAATCATAAACGATCCAAGCAAAAATATATCATCAAAAGAGGTAGCCCGACTGAGAAAACTGGTTGGCTATTGGAAGGAGCAAGCAGGAAGGAGGGGTAACGAAGAAGATGATCTTGAAGAAATTCGAGAAGAACGAGCAACCAGAGAGAAAGGAGATGGTCGCCACTCCATGTAG 3540 39.01 MFDMAERSGSSRRHTFNAGNDNEDSLLRSSSATSTGDGYDSDGSNFAPPTPTTISISLPAELASAIPLIDKFQVEGFLRLMHKQIHSAGKRGFFSKKSSSPPVQEKYTFEDMLCFQKDPIPTSMLKINGDLVNRATKLFQIILKYIGSDASDRGPATWDERIVLVGKLYKQILKHSELRDELFVQISKQTRNCPDRQYSIKAWELMCLCASSMPPSKDIGGYLSEYVHNVAHNMSTDSEIRKLAINTLNSLKHSVKAGPRHTIPAREEIEALLMGRKLTTIVFFLDETFEEITYDMATTVADAVEELAKIIKLSAYSSFSLFEYRKVVNSAKSHDTGNEEFLGLDDNKYIGDLLAEFRATKDRSKGEILHCKLIFKKKLFRESDEAVVDPMFVQLSYVQLQHDYLLGNYPVGRDDAAQLSSLQMLVESGFTSTPESSTDWNSFLERFLPRQIAITRAKHEWEHDILFRYSSLEHMTKDDARQQFLRILRTLPYGNSVFFSVRKIDDPIGLLPGRIILGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTGEEICVALQTHINDVMLRRYSKARSAVSGSMNGDTPDIFKAPSLELHQKQVQDLTKAVQESQRNADKLSKEMYEQQKQEAIMQKEIEDLKESVRHEKENLAEAMSELDRLRTLDDGKDKALQDALLEKKSVEARLAEMSTLVSKNNLKQDSIGAQNQVLQKLQDELKLCSKELVAFKETTKRLVHEKVNLEQVITGIEKKKQEEMDCLQRNFELERRLLQLKVSKLEKKMEDVNQELSVAESTLAIKNTDILALQNNLKELEDLREMKADIDRKNEQTNTIIKMQRAQLAELEVLYKEEQVLRKRYFNTMEDMKGKIRVYCRLRPLNDKEFLEKEKNVLTYLDEFTVEHPWKDDKPKQHIYDRVFDGTSSQYLVQSAVDGFNVSIFAYGQTGSGAYMVELYQDTLVDLLLPKNAKRLRLEIKKDTKGMVTVENVTMTSISTFEEMKSIIHQGSEQRHTAGTQMNEESSRSHLILSIIIESTNLQTQSVARGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVINALSSNGQHIPYRNHKLTMLMSDSLGGNAKTLMYAARVRSIINDPSKNISSKEVARLRKLVGYWKEQAGRRGNEEDDLEEIREERATREKGDGRHSM 1179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 50894782 50907453 - Bda019335.1 Bda04g00387 5409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00387 1179 SUPERFAMILY Second domain of FERM 376 493 IPR035963 -
Bda04g00387 1179 Gene3D MyTH4 domain 93 274 IPR038185 -
Bda04g00387 1179 SUPERFAMILY Prismane protein-like 810 871 IPR011254 GO:0003824|GO:0016491
Bda04g00387 1179 SUPERFAMILY PH domain-like 498 564 - -
Bda04g00387 1179 Pfam FERM central domain 385 498 IPR019748 -
Bda04g00387 1179 CDD FERM_B-lobe 393 491 IPR019748 -
Bda04g00387 1179 ProSitePatterns Kinesin motor domain signature. 1042 1053 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bda04g00387 1179 ProSiteProfiles MyTH4 domain profile. 115 273 IPR000857 GO:0005856
Bda04g00387 1179 PANTHER KINESIN-LIKE PROTEIN 66 945 - -
Bda04g00387 1179 PANTHER KINESIN-LIKE PROTEIN 946 1154 - -
Bda04g00387 1179 Coils Coil 760 828 - -
Bda04g00387 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 867 1152 IPR027417 -
Bda04g00387 1179 SMART kinesin_4 865 1131 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda04g00387 1179 Gene3D - 390 491 IPR014352 -
Bda04g00387 1179 ProSiteProfiles FERM domain profile. 278 594 IPR000299 GO:0005856
Bda04g00387 1179 Gene3D Kinesin motor domain 810 946 IPR036961 -
Bda04g00387 1179 Gene3D - 496 581 IPR011993 -
Bda04g00387 1179 Coils Coil 595 664 - -
Bda04g00387 1179 Pfam Microtubule binding 848 945 IPR031852 GO:0008017
Bda04g00387 1179 ProSiteProfiles Kinesin motor domain profile. 867 945 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda04g00387 1179 PRINTS Kinesin heavy chain signature 931 952 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda04g00387 1179 PRINTS Kinesin heavy chain signature 1043 1061 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda04g00387 1179 PRINTS Kinesin heavy chain signature 1012 1029 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda04g00387 1179 PRINTS Kinesin heavy chain signature 1092 1113 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda04g00387 1179 Pfam Kinesin motor domain 948 1117 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda04g00387 1179 ProSiteProfiles Kinesin motor domain profile. 948 1143 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda04g00387 1179 SMART B41_5 274 498 IPR019749 -
Bda04g00387 1179 SMART MyTH4_1 115 273 IPR000857 GO:0005856
Bda04g00387 1179 MobiDBLite consensus disorder prediction 1 50 - -
Bda04g00387 1179 Coils Coil 672 692 - -
Bda04g00387 1179 MobiDBLite consensus disorder prediction 11 50 - -
Bda04g00387 1179 MobiDBLite consensus disorder prediction 1148 1179 - -
Bda04g00387 1179 Gene3D - 277 381 - -
Bda04g00387 1179 Gene3D Kinesin motor domain 947 1126 IPR036961 -
Bda04g00387 1179 PANTHER KINESIN-LIKE PROTEIN KLP-3 66 945 - -
Bda04g00387 1179 PANTHER KINESIN-LIKE PROTEIN KLP-3 946 1154 - -
Bda04g00387 1179 Pfam MyTH4 domain 167 271 IPR000857 GO:0005856
Bda04g00387 1179 Coils Coil 710 730 - -
Bda04g00387 1179 Gene3D - 1127 1175 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00387 Bda10g00408 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00387 Bda-Chr4:50894782 Bda09g01292 Bda-Chr9:44679989 5.16E-56 dispersed
Bda10g00408 Bda-Chr10:36240863 Bda04g00387 Bda-Chr4:50894782 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00387 - - zju:107424285 1718.75