Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00436 ATGGAAGAAAGCTTCCTTCTGTTCTTGTCAGTCTCTCTTCTCACTCTCATCGCTCTCAAGTTTTTGTTTAAGTCGAGAAGGAAACCTGGAAATCTTCCCCCAAGTCCCGCCGGAATCCCGATCCTCGGCCACCTCCATCTCCTCAAGCCCCCTGTCCACAGAAGTCTACTCTCCCTTTCTCAAAAGTACGGTCCGGTCATCTCTCTCCGTTTCGGCTCCAAGCTCGTCGTCGTCGTCTCCTCTCCGTCAATAGCTGAAGAATGCTTCACCAAAAACGACGTCGTATTTGCCAATCGCCCGGATTTTACCGTCAGCCGGTATCTTAGTTACAACAACACAACGCTAGGGGCGTCCCCTTACGGCGACCACTGGCGTAAACTCCGGCGAGTTAGCGCATTGGAAATCTTGTCTTCAAACCGACTCAACTTATCGTTAAATATTCGAAGAGACGAAGTGCAGAGAATGTTAAAGAAAATTTACGGGGTTTCGAGCCGGGACTTTGCCGAGGTGGAGTTGAAGACACAGTTCAAGGAGATAACACTGAACGTAACAATGCGAATAGTCGCCGGAAAGAGATACTACGGGGAAGATGCAGTCGTCGATGAAGAAACAAAAAAATTCCGGCAGCTCATAGAAGAGCTGTTCGAGTTTACTCTGTCAAATTACCCAAGCGATTTTCTTCCGATATTGAAGTGGATCGAGACCATTCAGGGATATAACAGGAGAGCAGAGAAGCTAATCAAACGAATCGACAATTTCTGGCAAGGCTTGATTGATGAGTTCCGAAACGGGAAAGATGTTCAGAGGGAGGAACGGCAGAACTGCATGGTCGCCCATTTGCTGGTGCTGCAGAAAGAGCAGCCTGAGTACTATACAGAAGACATTCTCAAAGGTCTCATTTTGACGATGATACTCGGAGGGACTGATACATCATCGGTGACGATAGAGTGGGCGATGGCAAATATAATAAACTACCCAAAAGTAATGGAGAGAGCAAGAGCTGAAATAGAAGATAAGGTAGAGGCAGGAAAGCTGATTGCAGAATCAGATCTACCAAAGCTGAACTACTTGAAATGCATAGTCCTTGAGACACTCCGACTATACCCGGCAGGGCCGCTCCTCCTCCCGCATAAGTCCTCAGCCGACTGCACCTTGAGCGGCTACCACGTGCCGGCAGAGACAATTCTGCTTGTGAACGCATGGGCCATTCATAGGGATCCGAAGGTATGGGAAGACTCCACAACTTTTAAGCCGGAGCGATTCGAAAACCCAGAGAGTGAGGCTCACAAGCTGATGATTGCATTTGGTTTGGGACGAAGGTCTTGCCCTGGAGTCGGGATGGCACACCGGGTTCTAGGGTTGACGCTTGGCTCGTTGATTCAGTGCTTCGAGTGGAAGAAGATTGGCGAGAAGGAAATTGACATGGCTGAAGGGAAAGGAATCAGTATGCCTAAAGCTCTGCCACTAGAGGCTCTTTGTAAAGCACGGCCAATTGCCCATGCAATTATAGATTAA 1515 48.51 MEESFLLFLSVSLLTLIALKFLFKSRRKPGNLPPSPAGIPILGHLHLLKPPVHRSLLSLSQKYGPVISLRFGSKLVVVVSSPSIAEECFTKNDVVFANRPDFTVSRYLSYNNTTLGASPYGDHWRKLRRVSALEILSSNRLNLSLNIRRDEVQRMLKKIYGVSSRDFAEVELKTQFKEITLNVTMRIVAGKRYYGEDAVVDEETKKFRQLIEELFEFTLSNYPSDFLPILKWIETIQGYNRRAEKLIKRIDNFWQGLIDEFRNGKDVQREERQNCMVAHLLVLQKEQPEYYTEDILKGLILTMILGGTDTSSVTIEWAMANIINYPKVMERARAEIEDKVEAGKLIAESDLPKLNYLKCIVLETLRLYPAGPLLLPHKSSADCTLSGYHVPAETILLVNAWAIHRDPKVWEDSTTFKPERFENPESEAHKLMIAFGLGRRSCPGVGMAHRVLGLTLGSLIQCFEWKKIGEKEIDMAEGKGISMPKALPLEALCKARPIAHAIID 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 52147171 52149214 + Bda019399.2 Bda04g00436 5458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00436 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Bda04g00436 504 Pfam Cytochrome P450 33 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 8 501 - -
Bda04g00436 504 Gene3D Cytochrome P450 18 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 SUPERFAMILY Cytochrome P450 33 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00436 504 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 501 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00436 Bda-Chr4:52147171 Bda04g00439 Bda-Chr4:52390475 0 dispersed
Bda04g00436 Bda-Chr4:52147171 Bda04g00438 Bda-Chr4:52242077 4.07E-78 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00436 K13260 K25487 csv:101208069 678.322