Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00438 ATGGTCGCCCATTTACTAGTGTTGCAAAAGGAGCAGCCTGAGTACTGTATAGAAGACATTCTGAAAGGTCTCATTTTGTCGATGATACTCAGAGGGACTGATACATCATCGATGACGATAGAGTGGGCGATGACAAATCTAATAAACCATCCAAAAGTAATGGAGAAAGCAAGAGTTGAAATAGAAGATAAAGTAGATGCGGTAAAGCTAATTGAAGAATCAGATCTACCAAAGCTTAACTACTTGAAATGCATAGTCATTGAGACACTCCGACTATACCCGGCCATGCTGCTCCTCCTCTTGCATAGTTTCCCAATCGACTACACCTTGAGCAGCTACGATGTGCCGGTTGAGACAATTCTGCTTGTGAATGCATGGGCCATTCATAGGGATCCGAAGGTATGGGAAGACTCCACAACTTTTAAGCCTAACAATTTGAGAACCTAG 447 42.73 MVAHLLVLQKEQPEYCIEDILKGLILSMILRGTDTSSMTIEWAMTNLINHPKVMEKARVEIEDKVDAVKLIEESDLPKLNYLKCIVIETLRLYPAMLLLLLHSFPIDYTLSSYDVPVETILLVNAWAIHRDPKVWEDSTTFKPNNLRT 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 52242077 52245730 + Bda019401.1 Bda04g00438 5460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00438 148 PRINTS E-class P450 group I signature 83 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00438 148 PRINTS E-class P450 group I signature 124 148 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00438 148 PRINTS E-class P450 group I signature 40 66 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00438 148 PRINTS E-class P450 group I signature 20 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00438 148 Pfam Cytochrome P450 16 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00438 148 PRINTS P450 superfamily signature 31 48 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00438 148 PRINTS P450 superfamily signature 84 95 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00438 148 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 144 - -
Bda04g00438 148 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 1 144 - -
Bda04g00438 148 SUPERFAMILY Cytochrome P450 2 144 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00438 148 Gene3D Cytochrome P450 1 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00438 Bda-Chr4:52242077 Bda14g01262 Bda-Chr14:13268868 4.10E-51 dispersed
Bda04g00436 Bda-Chr4:52147171 Bda04g00438 Bda-Chr4:52242077 4.07E-78 proximal
Bda04g00438 Bda-Chr4:52242077 Bda04g00439 Bda-Chr4:52390475 8.51E-48 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00438 K13260 - csv:101208069 185.267