Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00439 ATGGACGTAGAGCTCACAAACTTCATAGCATTATCCTTTTCTATTCTCCTGTTTCTCTTGGCTTTCAAGTTTTTGGCAAACAAGACAAGAACAAGGGTTAATCTTCCTCCAACTCCATTTGGTCTTCCAATTTTCGGCCATCTTCATCTTCTCAAACACCCGGTTCATAGATCTCTTCAAGAACTCTCCTATAAACATGGCGAAATCTTCTCTCTCCACCTCGGGTCCCGCCTCATGGTGGTTGTATCCTCGCCGTCCGCAGTGGAGGAATGCTTCACTAAAAACGACATCATTTTTGCGAACCGACCAGAATTCCTTCTCGGCAAGTATCTGACGTATGGAAACACCACCCTGGGCGCCGCCCCCTACGGGGACCACTGGCGAAACCTCCGCCGTCTCAGCTCCGTCGAAATCTTCTCCACCAACCGCCTCAGTGCGTCCTCCGCTATGCGAAAGGACGAAGTACGCATTTTTCTGCAAAATCTATATCGAGATTCTGCCCATGGCTTCTCCAAAATAGAGCTGAAATCAAGGTTTTTGGAGCTGACGTTCAATATGATCATGAGAATGGTGGCCGGAAAGCGGTACTACGGCGAGGAGGTCAGCACAGTAAAAGAGGCGAAGGAATTCAGAGAGCTAATGACGGAGCTTTTCTCACTGGGGACTTATCCAGGTGACTTTCTGCCATTTCTGAAGTGGGTGGACGGCCAAGGGTACATGAAGAAGGTGGATAGACTTGGTAAAAAAACAGATAAAATTTTACAGGGCTTGATTGACGAATCTAGATCGTCGATTTCTCAAAGTGGAGCTCCAGATACCATGATTAATCATCTGCTCTGTCTTCAAAAAAAGGAGGCTGAGTATTACAGCGACGACATGATCAAAGGCATGATTATTACAATGCTATCTGCAGCAACTGAAACCTCATCAGTAACCTTAGAGTGGGCGATGTCAAACATGCTCAACTACCCAGATACACTGAGCAAGGCCAGAGGTGAACTAGATGCCTATTTAGGGGAGGAGCGGCAGCTGGCAGAGCCAGATCTTCCAAACCTGCATTACCTACAGAATATAATCGCTGAGACGCTCCGGTTATACCCTCCAGCTCCACTACTAGCCCTGCATTTGTCCTCCGAAAGTTGTACACTAGGAGGATACCACATTCCGGCCGATACGATGATAATGGTGAACGCATGGGCTATTCACAGAGACCCAAAGTCGTGGGAAGATTCGAGTAGTTTCAAGCCAGAGAGGTTTGAAAATGGTCTGGAAAATGATTCCTACCGATCGTTGCCGTTCGGTCAGGGGAGGAGGGCCTGCCCAGGAATGGGAATGGCCAACCGAGTTCTTGGATTAACACTTGGATCGCTCATCCAGTGCTTTGAGTGGAAGAGGATAGGTCAAGAGCTGCTAGACATGAAGGAAGGGCAAGGGCTTTCCATGCCTAAGGTTGTGCCGCTGGAGTGCTTGTGCAAACCAAGACCAATCATGCATAAGATTCTACCTAAAATTAGTCCTATTAATAACTAA 1530 47.52 MDVELTNFIALSFSILLFLLAFKFLANKTRTRVNLPPTPFGLPIFGHLHLLKHPVHRSLQELSYKHGEIFSLHLGSRLMVVVSSPSAVEECFTKNDIIFANRPEFLLGKYLTYGNTTLGAAPYGDHWRNLRRLSSVEIFSTNRLSASSAMRKDEVRIFLQNLYRDSAHGFSKIELKSRFLELTFNMIMRMVAGKRYYGEEVSTVKEAKEFRELMTELFSLGTYPGDFLPFLKWVDGQGYMKKVDRLGKKTDKILQGLIDESRSSISQSGAPDTMINHLLCLQKKEAEYYSDDMIKGMIITMLSAATETSSVTLEWAMSNMLNYPDTLSKARGELDAYLGEERQLAEPDLPNLHYLQNIIAETLRLYPPAPLLALHLSSESCTLGGYHIPADTMIMVNAWAIHRDPKSWEDSSSFKPERFENGLENDSYRSLPFGQGRRACPGMGMANRVLGLTLGSLIQCFEWKRIGQELLDMKEGQGLSMPKVVPLECLCKPRPIMHKILPKISPINN 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 52390475 52392403 - Bda019405.1 Bda04g00439 5461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00439 509 Gene3D Cytochrome P450 21 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 Pfam Cytochrome P450 36 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00439 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Bda04g00439 509 PANTHER CYTOCHROME P450 13 498 - -
Bda04g00439 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 498 - -
Bda04g00439 509 SUPERFAMILY Cytochrome P450 36 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00436 Bda-Chr4:52147171 Bda04g00439 Bda-Chr4:52390475 0 dispersed
Bda04g00439 Bda-Chr4:52390475 Bda14g01262 Bda-Chr14:13268868 0 dispersed
Bda04g00438 Bda-Chr4:52242077 Bda04g00439 Bda-Chr4:52390475 8.51E-48 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00439 K13260 K25488 csv:101207828 653.284