Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00504 ATGCTGGAATTCTTGTATGCAAATTGGCTCCATATTCGCGCCAACTACTTGGCCCCGCCGCTCCAGAGCTTGACTAATGTGTGCATTGTATTGTTCTTGATACAATCGGTGGATCGCATAGTATTGATGATGGGATGTTTTTGGATCAAGCTCCGGGGGTTGAAGCCTAAGTCGGAGATCGAGTATCCTGCCAGTGACGGAAATGTGAACGTGGAGGATTATCCTTCAGTGCTGGTACAGATTCCCATGTGCAATGAGAGGGAGGTTTACCAGCAATCTATTGCAGCTGTTTGTATTCAGGATTGGCCCAAGGAGAAAATGCTTGTACAGGTGTTAGATGATTCCGATGAACAAGATGTTCAAATGCTTATCAAGGCAGAAGTGCAAAAATGGCAACAAAGGGGCATTCGCATACTGTATAGACACCGTCTTATACGTACTGGCTATAAGGCAGGGAATCTCAAATCAGCTATGGGCTGTGATTATATAAAAGATTACGAGTTTGTGGCCATCTTTGATGCAGATTTTCAACCAGGCCCAGATTTTTTGAAGAAAACTATTCCACACTTCAAGGGAAATCATGATCTAGCATTGGTCCAGACAAGGTGGGCATTCGTAAACAAGGACGAGAACCTACTCACAAGACTGCAGAACATTAATTTATCATTCCATTTCGAGGTTGAACAGCAAGTCAATGGCGTGTTTCTCAACTTTTTTGGTTTTAATGGAACTGCTGGTGTATGGAAAATCAAAGCTCTTGAAGAATGTGGTGGCTGGTTAGACAGAACAACGGTAGAGGACATGGATATTGCTGTCCGAGCACATCTTCATGGGTGGAAGTTCATATATTTGAACGATGTTAAGTGCCTTTGTGAACTACCAGAGTCGTACGAGGCATACAAGAAACAGCAACATCGCTGGCATTCTGGTCCAATGCAATTGTTTCGCTTGTGTTTACTTGATGTAATGCGATCAAAGGTAAGTTGGGCGAAAAAGGCCAACCTGATATTTCTTTTTTTCCTCCTCCGAAAGCTTATCCTTCCCTTTTATTCTTTCACACTGTTTTGCATCATTCTCCCATTGACCATGTTCCTTCCGGAAGCTCAGCTCCCTGCATGGGTTGTTTGCTATGTCCCTGGAATCATGTCTATCTTAAACATACTTCCAGCACCAAGATCATTTCCGTTTATAGTACCTTACCTTCTGTTTGAGAATACCATGTCAGTAACCAAGTTCAATGCAATGATATCGGGATTGTTCCGCTTTGGGAGTTCTTATGAATGGATTGTTACAAAGAAGTTGGGTAGATCATCAGAGACTGATTTAGTTGCCTTTGAAAGGGAGTCTGATCCTCTGATGGAAACTACTGGTCTTCTTCGATCATCCTCTGAATCGGGCCTTCAAGAACTCACCAAGCTAGAAATATCTAAAAAAACTGGGAAGTCAAGAAAAAATCGTCTGTACAGAAAGGAGCTTGCTCTTGCATTTATTTTGTTAACTGCTTCTGTCAGAAGCTTGTTGTCTGCTCAAGGAATTCACTTCTACTTTCTCCTATTTCAAGGGATCACATTTCTAGTTGTTGGCCTTGATTTGATAGGAGAGCAGGTTAGTTGA 1614 42.26 MLEFLYANWLHIRANYLAPPLQSLTNVCIVLFLIQSVDRIVLMMGCFWIKLRGLKPKSEIEYPASDGNVNVEDYPSVLVQIPMCNEREVYQQSIAAVCIQDWPKEKMLVQVLDDSDEQDVQMLIKAEVQKWQQRGIRILYRHRLIRTGYKAGNLKSAMGCDYIKDYEFVAIFDADFQPGPDFLKKTIPHFKGNHDLALVQTRWAFVNKDENLLTRLQNINLSFHFEVEQQVNGVFLNFFGFNGTAGVWKIKALEECGGWLDRTTVEDMDIAVRAHLHGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCLLDVMRSKVSWAKKANLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAQLPAWVVCYVPGIMSILNILPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWIVTKKLGRSSETDLVAFERESDPLMETTGLLRSSSESGLQELTKLEISKKTGKSRKNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGITFLVVGLDLIGEQVS 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 53599656 53608064 - Bda019477.2 Bda04g00504 5526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00504 537 PANTHER - 1 536 - -
Bda04g00504 537 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 66 293 IPR029044 -
Bda04g00504 537 Pfam Glycosyl transferase family group 2 169 374 IPR001173 -
Bda04g00504 537 SUPERFAMILY Nucleotide-diphospho-sugar transferases 74 353 IPR029044 -
Bda04g00504 537 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 1 536 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00384 Bda-Chr1:29777512 Bda04g00504 Bda-Chr4:53599656 4.48E-80 dispersed
Bda04g00504 Bda-Chr4:53599656 Bda11g00885 Bda-Chr11:8689933 0 dispersed
Bda10g00519 Bda-Chr10:38817715 Bda04g00504 Bda-Chr4:53599656 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00504 - - jre:109008513 964.526