Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00518 ATGGCGAGCGAGCAGTTGCAGGTTTTGAACGCGCTGGATGTCGCAAGAACACAGTGGTATCATTTCACGGCGATTATCATCGCTGGAATGGGGTTCTTCACCGATGCATACGATCTTTTCTGCATATCACTCGTAACGAAATTGCTCGGACGCATATACTACCACGTCGAAGGATCTGTGAAACCCGGCACACTGCCGCCCAACGTCTCGGCCGCCGTCAATGGGGTGGCATTGTGTGGGACGCTCGCTGGCCAGCTTTTCTTCGGATGGCTTGGCGACAAATTGGGCAGAAAGAGGGTTTACGGCATCACCCTCGTTCTCATGGTTGTCTGCTCCATTGGCTCCGGTCTTTCCTTTGGACATTCGGCTAAATCCGTCATGGCAACTCTATGCTTTTTCAGATTTTGGCTTGGGTTCGGAGTCGGAGGCGACTACCCGCTCTCCGCCACCATCATGTCAGAATATTCGAACAAAAAGACTCGAGGAGCCTTCATTGCCGCCGTCTTCGCCATGCAGGGGTTTGGGATATTGGGTGGTGGGATTTTTGCTATGATCATGTCGTCTATATTTCAGGCCAAATTCAAGGCACCTTCTTATGAAATCGATCCGATTGGATCCACTGTCAAGGAAGCCGACTATCTTTGGAGGATCATTCTAATGGTGGGGGCTCTTCCGGCCGCGTTAACTTTCTATTCGCGAACGAAAATGCCGGAGACTGCCCGTTACACGGCCCTCGTCGCCAAAAACGCCACACAGGCTGCATCGGACATGTCAAAGGTATTGCAGGTAGACGTCGAGGCAGAGACTGAGAGAGTGGAGAGGCTCTCCTCTAACCCAGAAAATTCATTCGGATTGTTCTCCAAGCAGTTCTTGAAACGACACGGCCTGCATTTACTCGGAACAGCAACCACATGGTTCTTGCTCGACATTGCATTCTACAGCCAAAACCTGTTCCAGAAAGACATTTTCAGCGCCATTGGTTGGATTCCTCCGGCCAAGACCATGAACGCCGTTCACGAAGTCTACAGAATCGCCAGAGCTCAGACTCTCATCGCCCTTTGCAGTACAGTACCTGGGTACTGGTTGACAGTCGCTTTCATCGACAGAATCGGAAGATTTACCATTCAGCTCATGGGTTTTTTCTTCATGACAGTGTTCATGTTTGCTCTGGCCTTTCCCTACAACTACTGGATCGAAAAGAGCCACCTCATTGGCTTCATAGTCCTGTATTCCCTCACTTTCTTCTTCGCTAATTTCGGACCCAACGCCACCACTTTCGTAGTTCCGGCAGAGATATTTCCGGCTCGACTCCGGTCAACCTGCCACGGGATATCGGCCGCATCGGGGAAGCTGGGTGCCATGGTAGGTGCATTCGGATTCTTGTACTTGGCTCAGAACCCAGACAAAACAAAGACTGATGCCGGGTTTCCGCCGGGCATTGGAGTGAAAAACTCGCTCATTGTCTTGGGCGTCGTCAACTTCTTGGGATTGTTATTCACTTTTCTGGTACCTGAATCGAAAGGCAAATCCTTGGAGGAGATGAGCGGCGAAAATCCAGACGAAGACAATTGA 1572 50.76 MASEQLQVLNALDVARTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVEGSVKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKRVYGITLVLMVVCSIGSGLSFGHSAKSVMATLCFFRFWLGFGVGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAMIMSSIFQAKFKAPSYEIDPIGSTVKEADYLWRIILMVGALPAALTFYSRTKMPETARYTALVAKNATQAASDMSKVLQVDVEAETERVERLSSNPENSFGLFSKQFLKRHGLHLLGTATTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNAVHEVYRIARAQTLIALCSTVPGYWLTVAFIDRIGRFTIQLMGFFFMTVFMFALAFPYNYWIEKSHLIGFIVLYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAMVGAFGFLYLAQNPDKTKTDAGFPPGIGVKNSLIVLGVVNFLGLLFTFLVPESKGKSLEEMSGENPDEDN 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 53786638 53788209 - Bda019492.1 Bda04g00518 5540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00518 523 Pfam Sugar (and other) transporter 26 515 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bda04g00518 523 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Bda04g00518 523 Gene3D MFS general substrate transporter like domains 20 523 IPR036259 -
Bda04g00518 523 PANTHER PHOSPHATE TRANSPORTER 1 522 - -
Bda04g00518 523 TIGRFAM 2A0109: phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Bda04g00518 523 CDD MFS_PhT 25 507 - -
Bda04g00518 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Bda04g00518 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 522 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00518 Bda-Chr4:53786638 Bda05g00851 Bda-Chr5:57035355 0 dispersed
Bda04g00516 Bda-Chr4:53729718 Bda04g00518 Bda-Chr4:53786638 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00518 K08176 - jre:108992702 917.146