Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00553 ATGGCGGAGAGTGGAGAACCGGCGATCGGAATAGACCTGGGGACGACCAACTCATGCGTCGGAGTGTGGATGAATGATCGAGTTAAGATCATTATAAACGAGCAAGGGAAGAGGACTACGCCATCTTACGTTGCTTTCGACGATTTCCAGCGACTGATCGGTGATAACGCTAAGAGACAGGTCGCCGTTAACCCGACGAATACCGTCTTCGATGTGAAGCGACTCATCGGTAGAAGATTCAGTGATGAAATCGTACAGAATGATTTAAAGCTCTGGCCTTTCCGCGTCGTGGAAGGTCCTCGCGATGAACCGGAGATTGTCGTTATCCACAGCGGTCAGGAGAAACGGATGACGCCCATTCAAATCTCGGCGATGGTCTTGGAAAAGATGCGTGAAATCGCGACTGCGAAACTCGGATGTCCGGTGAAGTACGCCGTGATCACAGTCCCTGCGTATTTCAATGATTCTCAACGACAAGCCACTATGGACGCCGGAGAGATCGCCGGCCTCAAAGTCATGCGAATAATCAACGAGCCCACTGCAGCCGCCATTGCTTACGGGCTGGACAAGAAATCCGACACCGGAGGTCGGAAAACTGTTCTGGTCTTTGATTTGGGTGGAGGAACTCTAGACGTCTCTCTGCTGAGCATTTACCAAGGTAACATCGAAGTTAAGGCCACTAATGGCGATTCACATCTCGGTGGAGAAGATTTCGATAATAGAATGGTGAAGCATTTCGCGGATGAGTTTGCGATAAAGACGAATCAGGAGATTAGAGGAAACCCAAAAGCAATTAGAAGATTGAGAAATTCTTGCGAGGAGGCGAAGATACTTCTCTCAGAAGCAGAAACAGCTTCACTTTCTATCGATTGTTTATACGTTGGAATTGATTTCTCTTCCTCCATAACGCGAGCGATGTTTGTCGAAATCAACAGGGATTTGTTCAGGAAGTGCATGAAAGCTGTCGAAAATTGTTTGGCCGATGCAAATATGGAGAAAAGCTATGTTGACGAGGTTGTTCTTGTCGGTGGTTCAACAAGAATTCCACATTTACAGTATCTTTTGCAGGAGTTTTTCAACGGAAAGCAGCTATGCAAGAGCATTAATCCGGACGAAGCGGTGGCACAGGGAGCGGCAATCCAGGCGGCAAAGATGACCGGTAAGTGTGACGGAGACTTGAGAAACTTCAACTTCTCAGACGTCACTCCGCTCTCTATAGCCGTGGCGACAGACTCCGGCGAGGCTACAGTTTTGATCCCGAAAAATTCGAAAATTCCGACAGAGAAGAAGTACGTTTGTACTACTTTCGAAGACAATCAAACCAAAATAAAGATCCTTGTTTACGAGGGCCAAGAAGCAGATATAGCCAGGAGGAGAAACGTAATTGGATTGATTGAACTCAACGATATACCTCCAGCTCCCAAGGGTTCTCAAAAAATTTCAGTTTTGCTTCAGATCAACCCCAACGGGATCTTGAAAATGACAGCTGAGGATCAGACGAATGGCTCCCGCGATTACAAGAACAAGAAGACTGTCTCCATTGAAAGAAGAATAATGTCTGAAGAGGAAATAAGGAAGAACAGTAGGCAAACTGAAAAGTACATGGCTGAAGACGAGGAGCACATGCAGACGGTGAAAGCCAAAAACGCTTTGCAAACCTATGTCTTCAACATGCGGGATTTAATGGTCAACGATGAAGATCTTGGTCTAAGACCTGGGTGGGAAGACAAGAAAACTCTTGAAGATGCCATTCTTATAGTCAACAAATGGCTTGAAAAGGTAGTGACTCCCGGCGTCGATGACTACGAAAAAAAGTTGGAGGAGCTTGACAGTGTTTGTTACCCAATAATTAACAAAATACAGGAGGGTAGAAAAGGCAAGCTTCAGCGATCTTCAACCGGCAGCCGAAGCTCCGATAATCCAGAAGATATGACGATTCGGCACTGGAGCCATGAACATGTCCTTAAACTACTGCCGCTAGAGACGCCTTGTCTCTGCAATGGGTGTCAAGTTCTTGTGTTCAAACCATGTTACCAATGTGATCAAAATCTCTGCAACTATCGGCTTCACGAAGAATGTGCGACGGCTTCCGCAAATGGCTTCCACCCGTTTTTACGAGACTGCGAGTTCAAGTTTTACAGGAGCTACCAGTATCCAAACGACGAAACTTGTGATGGTTGCGGGAAGGACTTGAAAGGGTTCTTATATCAGTTAGCTGGGCCGGGGTCACGACATCAGTGCTTTCACAAGGAGCCACACAAGCTACACCCGTGTTGCCTAAAGCTCGAGAAAACCCTAGTTGGACATGGAGTCATGCTTCGTCTCGCCAAAAGCTCGTCTTCAGAGTGCGCAAAATGTGAACAAAAGGAGGTCTTGAAGGGGTTCAAAGGATGGTCCTATGTTTCGAGTGATGGAAAATGCAGTTACCACGTGGCTTGTGTGAAGGACTTGTTCCACGAGCAATGGAAGGAGAAAAAGTTCTACAGAAGCCCATCGGAAGGAAGCAGCGGAAGGTATGAAAACATGGAGAATTTGAAACTGCGAATTATAGTTCCAAGCAAACAAACCGGAGAGTCTTCATTCGTGAAGAAATTTGGAAAGTTATTCAATACCGCAAAGATTGCTCTCTCTCTCGCTTTCTCGGCTTTGTTTGGAGGCCCTCTTGATTATCTCTTTGATCTTGCTGTAGCTTCGCTTCAGTAA 2703 46.36 MAESGEPAIGIDLGTTNSCVGVWMNDRVKIIINEQGKRTTPSYVAFDDFQRLIGDNAKRQVAVNPTNTVFDVKRLIGRRFSDEIVQNDLKLWPFRVVEGPRDEPEIVVIHSGQEKRMTPIQISAMVLEKMREIATAKLGCPVKYAVITVPAYFNDSQRQATMDAGEIAGLKVMRIINEPTAAAIAYGLDKKSDTGGRKTVLVFDLGGGTLDVSLLSIYQGNIEVKATNGDSHLGGEDFDNRMVKHFADEFAIKTNQEIRGNPKAIRRLRNSCEEAKILLSEAETASLSIDCLYVGIDFSSSITRAMFVEINRDLFRKCMKAVENCLADANMEKSYVDEVVLVGGSTRIPHLQYLLQEFFNGKQLCKSINPDEAVAQGAAIQAAKMTGKCDGDLRNFNFSDVTPLSIAVATDSGEATVLIPKNSKIPTEKKYVCTTFEDNQTKIKILVYEGQEADIARRRNVIGLIELNDIPPAPKGSQKISVLLQINPNGILKMTAEDQTNGSRDYKNKKTVSIERRIMSEEEIRKNSRQTEKYMAEDEEHMQTVKAKNALQTYVFNMRDLMVNDEDLGLRPGWEDKKTLEDAILIVNKWLEKVVTPGVDDYEKKLEELDSVCYPIINKIQEGRKGKLQRSSTGSRSSDNPEDMTIRHWSHEHVLKLLPLETPCLCNGCQVLVFKPCYQCDQNLCNYRLHEECATASANGFHPFLRDCEFKFYRSYQYPNDETCDGCGKDLKGFLYQLAGPGSRHQCFHKEPHKLHPCCLKLEKTLVGHGVMLRLAKSSSSECAKCEQKEVLKGFKGWSYVSSDGKCSYHVACVKDLFHEQWKEKKFYRSPSEGSSGRYENMENLKLRIIVPSKQTGESSFVKKFGKLFNTAKIALSLAFSALFGGPLDYLFDLAVASLQ 900
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 54191008 54194497 - Bda019524.1 Bda04g00553 5575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00553 900 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 547 625 IPR029048 -
Bda04g00553 900 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Bda04g00553 900 Gene3D - 191 365 - -
Bda04g00553 900 SUPERFAMILY Actin-like ATPase domain 196 386 IPR043129 -
Bda04g00553 900 Gene3D - 9 383 - -
Bda04g00553 900 SUPERFAMILY Cysteine-rich domain 644 700 IPR046349 -
Bda04g00553 900 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Bda04g00553 900 PANTHER HEAT SHOCK PROTEIN 70KDA 5 627 IPR013126 GO:0005524|GO:0140662
Bda04g00553 900 SUPERFAMILY Actin-like ATPase domain 7 190 IPR043129 -
Bda04g00553 900 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 391 551 IPR029047 -
Bda04g00553 900 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 547 IPR029047 -
Bda04g00553 900 PRINTS 70kDa heat shock protein signature 368 388 - -
Bda04g00553 900 PRINTS 70kDa heat shock protein signature 336 352 - -
Bda04g00553 900 PRINTS 70kDa heat shock protein signature 145 165 - -
Bda04g00553 900 PRINTS 70kDa heat shock protein signature 35 47 - -
Bda04g00553 900 PRINTS 70kDa heat shock protein signature 57 65 - -
Bda04g00553 900 PRINTS 70kDa heat shock protein signature 395 414 - -
Bda04g00553 900 PRINTS 70kDa heat shock protein signature 7 20 - -
Bda04g00553 900 PRINTS 70kDa heat shock protein signature 208 218 - -
Bda04g00553 900 PRINTS 70kDa heat shock protein signature 477 493 - -
Bda04g00553 900 Pfam Hsp70 protein 8 621 IPR013126 GO:0005524|GO:0140662
Bda04g00553 900 Gene3D - 70 125 - -
Bda04g00553 900 Coils Coil 265 285 - -
Bda04g00553 900 Gene3D Actin; Chain A, domain 4 234 317 - -
Bda04g00553 900 Gene3D - 548 645 IPR029048 -
Bda04g00553 900 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 5 627 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00553 Bda-Chr4:54191008 Bda14g00125 Bda-Chr14:864123 0 dispersed
Bda04g00553 Bda-Chr4:54191008 Bda14g00118 Bda-Chr14:808053 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00553 K03283 - mus:103968995 718.768