Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda04g00588 | ATGGGTTTCAACCTGGGCTCTTTCCTGACATCAATGCTAAAATCCAACCCGGGCGAAGCTCATGTCGATTCAACAACCTTATTTGTGTTACTTCTCTGTGCTTGTGTCATTATTGGTCATCTTCTCGAGAAGAATCGTTACATGAACGAGTCGATTACTGCCTTAGCGATTGGTCTTTTCACGGGGATCGTCATTTTATTTTCGACTGAAGGAAAAAGCTCTCATCTCTTGGTGTTTAATGAACAACTATTCTTCATCTATCTTCTTCCACCGATCATTTTTAATGCGGGGTTTCAGGTGAAAAAGAAGCAGTTCTTCAGAAATTTCTCGACAATTGTTTTGTTTGGTGCCGTTGGTAGCTTGATATCTTTTTTCATCATATCGATAGGTTCAATGTATTTGTTCGAGAAATTGGATGTTGGCTTCTTAGAGGTGGCTGATTATTATGCACTTGGAGCAATCTTAACTGCAACCGATACGGTTTGTACGTTGCAGGTGCTTAATCAGGATGAGACGCCTTTGCTGTACAGTCTAGTCTTTGGTGAAGGTGTAGTCAACGATGCGACTTCTGTGGTTCTTTTCCATGCGATCCGGAAATTCGACCTTTCCCACATTACTTCGATCAATGCCATTCAACTAGTTGGCAATTTCTTCTATTTGTTCTTGACTAGCACATTGCTGGGGATAGCTGTCGGTTTGCTCAGTGCTTACATCATTCGGAAACTGTACCTTGGCAGGCACTCTGCAGATCGGGAAATCGCTCTAATGATTCTAATGGCTTATCTTTCATATATGTTGGCCGAACTGTGCCTTTTAAGTGGTATTCTTACCGTCTTTTTTTGTGGGATCGTCATGTCGCATTACACCTGGTATAACGTGACGAAGAGTTCAAAGGTCACTACCAAGCATGCTTTTGGGACGCTATCATTTATTTCAGAGATTTTCATCTTCCTCTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAAATTTGTGCTCAAGAGCCCTGGGACGTCAGTTACTGTGAGTTTAATACTGCTCGGTCTGGTTCTTGTTGGAAGAGCGGCTTTTGTCTTCCCTCTCTCTTTCGTAGCCAACTTGAGTCGGAAGCATAAGAGCGACAAAATCGGGTTCAGGAAGCAGATTACGATTTGGTGGGCTGGACTGATGAGAGGTGCTGTATCAGTGGCACTTGCTTATGATCATTTTACGAGATCAGGACAAACCCAACTTCGAGGGAACGCGATCATGATCACGAGCACGATAAGCATTGTGCTCTTTACAAATATGGTATGTGGATTATTGACTAAGCCTCTGATAAGGCACTTGCTTCCATCAAGTAGACCAAGAGAAGCCGCCATTGCACTCTCGGACTCGCCTGCACTCTCTAGCCCACTTCTATCGTACGGGCCCACTCAAGAAGATCAAGGACTCGATACGAGTGGCGACTCGGGTCTCGGGCCACAACCGAGGAGTTTGTCACGCTCCATTCATCACTACTGGCGATTGCTAGACGATTCTTACATGCGGCCCTTGTTTGGGGGAAGAGGTTTCGTGTCGAACATTCCCATTTCGGTATTCGATAAGTTTATTCGATGA | 1602 | 44.26 | MGFNLGSFLTSMLKSNPGEAHVDSTTLFVLLLCACVIIGHLLEKNRYMNESITALAIGLFTGIVILFSTEGKSSHLLVFNEQLFFIYLLPPIIFNAGFQVKKKQFFRNFSTIVLFGAVGSLISFFIISIGSMYLFEKLDVGFLEVADYYALGAILTATDTVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFHAIRKFDLSHITSINAIQLVGNFFYLFLTSTLLGIAVGLLSAYIIRKLYLGRHSADREIALMILMAYLSYMLAELCLLSGILTVFFCGIVMSHYTWYNVTKSSKVTTKHAFGTLSFISEIFIFLYVGMDALDIDKWKFVLKSPGTSVTVSLILLGLVLVGRAAFVFPLSFVANLSRKHKSDKIGFRKQITIWWAGLMRGAVSVALAYDHFTRSGQTQLRGNAIMITSTISIVLFTNMVCGLLTKPLIRHLLPSSRPREAAIALSDSPALSSPLLSYGPTQEDQGLDTSGDSGLGPQPRSLSRSIHHYWRLLDDSYMRPLFGGRGFVSNIPISVFDKFIR | 533 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 54568388 | 54573694 | - | Bda019559.1 | Bda04g00588 | 5610 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda04g00588 | 533 | TIGRFAM | b_cpa1: sodium/hydrogen exchanger 3 | 26 | 444 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bda04g00588 | 533 | Pfam | Sodium/hydrogen exchanger family | 29 | 442 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Bda04g00588 | 533 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 9 | 527 | - | - | |
Bda04g00588 | 533 | PRINTS | Na+/H+ exchanger signature | 152 | 162 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bda04g00588 | 533 | PRINTS | Na+/H+ exchanger signature | 83 | 94 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bda04g00588 | 533 | PRINTS | Na+/H+ exchanger signature | 97 | 111 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bda04g00588 | 533 | PRINTS | Na+/H+ exchanger signature | 112 | 120 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bda04g00588 | 533 | Gene3D | - | 144 | 195 | - | - | |
Bda04g00588 | 533 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 9 | 527 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00588 | Bda-Chr4:54568388 | Bda08g00277 | Bda-Chr8:2892266 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda04g00588 | - | K14724 | zju:107426063 | 709.909 |