Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00588 ATGGGTTTCAACCTGGGCTCTTTCCTGACATCAATGCTAAAATCCAACCCGGGCGAAGCTCATGTCGATTCAACAACCTTATTTGTGTTACTTCTCTGTGCTTGTGTCATTATTGGTCATCTTCTCGAGAAGAATCGTTACATGAACGAGTCGATTACTGCCTTAGCGATTGGTCTTTTCACGGGGATCGTCATTTTATTTTCGACTGAAGGAAAAAGCTCTCATCTCTTGGTGTTTAATGAACAACTATTCTTCATCTATCTTCTTCCACCGATCATTTTTAATGCGGGGTTTCAGGTGAAAAAGAAGCAGTTCTTCAGAAATTTCTCGACAATTGTTTTGTTTGGTGCCGTTGGTAGCTTGATATCTTTTTTCATCATATCGATAGGTTCAATGTATTTGTTCGAGAAATTGGATGTTGGCTTCTTAGAGGTGGCTGATTATTATGCACTTGGAGCAATCTTAACTGCAACCGATACGGTTTGTACGTTGCAGGTGCTTAATCAGGATGAGACGCCTTTGCTGTACAGTCTAGTCTTTGGTGAAGGTGTAGTCAACGATGCGACTTCTGTGGTTCTTTTCCATGCGATCCGGAAATTCGACCTTTCCCACATTACTTCGATCAATGCCATTCAACTAGTTGGCAATTTCTTCTATTTGTTCTTGACTAGCACATTGCTGGGGATAGCTGTCGGTTTGCTCAGTGCTTACATCATTCGGAAACTGTACCTTGGCAGGCACTCTGCAGATCGGGAAATCGCTCTAATGATTCTAATGGCTTATCTTTCATATATGTTGGCCGAACTGTGCCTTTTAAGTGGTATTCTTACCGTCTTTTTTTGTGGGATCGTCATGTCGCATTACACCTGGTATAACGTGACGAAGAGTTCAAAGGTCACTACCAAGCATGCTTTTGGGACGCTATCATTTATTTCAGAGATTTTCATCTTCCTCTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAAATTTGTGCTCAAGAGCCCTGGGACGTCAGTTACTGTGAGTTTAATACTGCTCGGTCTGGTTCTTGTTGGAAGAGCGGCTTTTGTCTTCCCTCTCTCTTTCGTAGCCAACTTGAGTCGGAAGCATAAGAGCGACAAAATCGGGTTCAGGAAGCAGATTACGATTTGGTGGGCTGGACTGATGAGAGGTGCTGTATCAGTGGCACTTGCTTATGATCATTTTACGAGATCAGGACAAACCCAACTTCGAGGGAACGCGATCATGATCACGAGCACGATAAGCATTGTGCTCTTTACAAATATGGTATGTGGATTATTGACTAAGCCTCTGATAAGGCACTTGCTTCCATCAAGTAGACCAAGAGAAGCCGCCATTGCACTCTCGGACTCGCCTGCACTCTCTAGCCCACTTCTATCGTACGGGCCCACTCAAGAAGATCAAGGACTCGATACGAGTGGCGACTCGGGTCTCGGGCCACAACCGAGGAGTTTGTCACGCTCCATTCATCACTACTGGCGATTGCTAGACGATTCTTACATGCGGCCCTTGTTTGGGGGAAGAGGTTTCGTGTCGAACATTCCCATTTCGGTATTCGATAAGTTTATTCGATGA 1602 44.26 MGFNLGSFLTSMLKSNPGEAHVDSTTLFVLLLCACVIIGHLLEKNRYMNESITALAIGLFTGIVILFSTEGKSSHLLVFNEQLFFIYLLPPIIFNAGFQVKKKQFFRNFSTIVLFGAVGSLISFFIISIGSMYLFEKLDVGFLEVADYYALGAILTATDTVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFHAIRKFDLSHITSINAIQLVGNFFYLFLTSTLLGIAVGLLSAYIIRKLYLGRHSADREIALMILMAYLSYMLAELCLLSGILTVFFCGIVMSHYTWYNVTKSSKVTTKHAFGTLSFISEIFIFLYVGMDALDIDKWKFVLKSPGTSVTVSLILLGLVLVGRAAFVFPLSFVANLSRKHKSDKIGFRKQITIWWAGLMRGAVSVALAYDHFTRSGQTQLRGNAIMITSTISIVLFTNMVCGLLTKPLIRHLLPSSRPREAAIALSDSPALSSPLLSYGPTQEDQGLDTSGDSGLGPQPRSLSRSIHHYWRLLDDSYMRPLFGGRGFVSNIPISVFDKFIR 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 54568388 54573694 - Bda019559.1 Bda04g00588 5610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00588 533 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 444 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda04g00588 533 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bda04g00588 533 PANTHER SODIUM/HYDROGEN EXCHANGER 9 527 - -
Bda04g00588 533 PRINTS Na+/H+ exchanger signature 152 162 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda04g00588 533 PRINTS Na+/H+ exchanger signature 83 94 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda04g00588 533 PRINTS Na+/H+ exchanger signature 97 111 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda04g00588 533 PRINTS Na+/H+ exchanger signature 112 120 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda04g00588 533 Gene3D - 144 195 - -
Bda04g00588 533 PANTHER SODIUM/HYDROGEN EXCHANGER 9 527 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00588 Bda-Chr4:54568388 Bda08g00277 Bda-Chr8:2892266 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00588 - K14724 zju:107426063 709.909