Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda04g00604 | ATGTCGCCGATCAAGGTTCATGGTACTCCTTTCTCCACCGCCGCTGCTCGCGTTCTCTGCTGCCTTTTCGAGAAAGATATCGATTTCGAGTTTGTTGCTGTTGATATGAGAACGGGCGAACACAAGAAGGAGCCTTTCATTTCCCTCAATCCATTTGGCCAAGTTCCAGGGTTTGAAGATGGAGATCTATCGCTATTCGAATCTAGGGCAATTACCCAGTACCTTGTGTACGCCTATCCTGAAAAGGGAGCCGAATTGATACCTTCGGACAAGAAGGAAATGGGTACAACATTGACATGGATGAATGTAGAGGCTCACCAGTACGACCCACCTGCCGCAAAGCTGGCTTTCGAGCTGTTTCTGAAGTCATTGCTTGGAATTGGGGCTCCCGATGCAGCAGCGGTGGCGGAAAATGAAGCTAAGTTGTGTAAAGTTCTGGACATATATGAGGCTAAATTGTCCAAGACTAAATATTTGGCCGGCGACTGCTTCACTCTAGCAGATCTGCATCATCTTCCTACTCTTACCTACTTGATGCCCACAGACGCTAAGAAGCTATTCGAAGCACGCCCACATGTCAATCTCTGGGTGAATGACATTATGTCCAGGCCATCTTGGGGTAAGGTCCTCGCTATGAGAAACACAGCTTGA | 651 | 47.93 | MSPIKVHGTPFSTAAARVLCCLFEKDIDFEFVAVDMRTGEHKKEPFISLNPFGQVPGFEDGDLSLFESRAITQYLVYAYPEKGAELIPSDKKEMGTTLTWMNVEAHQYDPPAAKLAFELFLKSLLGIGAPDAAAVAENEAKLCKVLDIYEAKLSKTKYLAGDCFTLADLHHLPTLTYLMPTDAKKLFEARPHVNLWVNDIMSRPSWGKVLAMRNTA | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 54662248 | 54663110 | + | Bda019574.4 | Bda04g00604 | 5626 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda04g00604 | 216 | CDD | GST_C_Phi | 92 | 210 | IPR034347 | - | |
Bda04g00604 | 216 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Bda04g00604 | 216 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 216 | IPR010987 | - | |
Bda04g00604 | 216 | Pfam | Glutathione S-transferase, N-terminal domain | 3 | 76 | IPR004045 | - | |
Bda04g00604 | 216 | SFLD | Main.5: Phi-like | 1 | 213 | - | - | |
Bda04g00604 | 216 | PANTHER | GLUTATHIONE S-TRANSFERASE F6-RELATED | 4 | 215 | - | - | |
Bda04g00604 | 216 | CDD | GST_N_Phi | 3 | 75 | - | - | |
Bda04g00604 | 216 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 4 | 215 | - | - | |
Bda04g00604 | 216 | SUPERFAMILY | GST C-terminal domain-like | 74 | 213 | IPR036282 | - | |
Bda04g00604 | 216 | SFLD | Glutathione Transferase (cytosolic) | 1 | 213 | IPR040079 | - | |
Bda04g00604 | 216 | Pfam | Glutathione S-transferase, C-terminal domain | 121 | 204 | IPR004046 | - | |
Bda04g00604 | 216 | Gene3D | - | 90 | 214 | - | - | |
Bda04g00604 | 216 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 2 | 83 | IPR004045 | - | |
Bda04g00604 | 216 | SUPERFAMILY | Thioredoxin-like | 1 | 88 | IPR036249 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00604 | Bda-Chr4:54662248 | Bda08g01187 | Bda-Chr8:47879835 | 5.98E-60 | dispersed | |
Bda04g00604 | Bda-Chr4:54662248 | Bda12g00050 | Bda-Chr12:336677 | 3.84E-34 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda04g00604 | K00799 | - | nnu:104598999 | 297.36 |