Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00604 ATGTCGCCGATCAAGGTTCATGGTACTCCTTTCTCCACCGCCGCTGCTCGCGTTCTCTGCTGCCTTTTCGAGAAAGATATCGATTTCGAGTTTGTTGCTGTTGATATGAGAACGGGCGAACACAAGAAGGAGCCTTTCATTTCCCTCAATCCATTTGGCCAAGTTCCAGGGTTTGAAGATGGAGATCTATCGCTATTCGAATCTAGGGCAATTACCCAGTACCTTGTGTACGCCTATCCTGAAAAGGGAGCCGAATTGATACCTTCGGACAAGAAGGAAATGGGTACAACATTGACATGGATGAATGTAGAGGCTCACCAGTACGACCCACCTGCCGCAAAGCTGGCTTTCGAGCTGTTTCTGAAGTCATTGCTTGGAATTGGGGCTCCCGATGCAGCAGCGGTGGCGGAAAATGAAGCTAAGTTGTGTAAAGTTCTGGACATATATGAGGCTAAATTGTCCAAGACTAAATATTTGGCCGGCGACTGCTTCACTCTAGCAGATCTGCATCATCTTCCTACTCTTACCTACTTGATGCCCACAGACGCTAAGAAGCTATTCGAAGCACGCCCACATGTCAATCTCTGGGTGAATGACATTATGTCCAGGCCATCTTGGGGTAAGGTCCTCGCTATGAGAAACACAGCTTGA 651 47.93 MSPIKVHGTPFSTAAARVLCCLFEKDIDFEFVAVDMRTGEHKKEPFISLNPFGQVPGFEDGDLSLFESRAITQYLVYAYPEKGAELIPSDKKEMGTTLTWMNVEAHQYDPPAAKLAFELFLKSLLGIGAPDAAAVAENEAKLCKVLDIYEAKLSKTKYLAGDCFTLADLHHLPTLTYLMPTDAKKLFEARPHVNLWVNDIMSRPSWGKVLAMRNTA 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 54662248 54663110 + Bda019574.4 Bda04g00604 5626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00604 216 CDD GST_C_Phi 92 210 IPR034347 -
Bda04g00604 216 Gene3D Glutaredoxin 1 87 - -
Bda04g00604 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 216 IPR010987 -
Bda04g00604 216 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Bda04g00604 216 SFLD Main.5: Phi-like 1 213 - -
Bda04g00604 216 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 4 215 - -
Bda04g00604 216 CDD GST_N_Phi 3 75 - -
Bda04g00604 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 215 - -
Bda04g00604 216 SUPERFAMILY GST C-terminal domain-like 74 213 IPR036282 -
Bda04g00604 216 SFLD Glutathione Transferase (cytosolic) 1 213 IPR040079 -
Bda04g00604 216 Pfam Glutathione S-transferase, C-terminal domain 121 204 IPR004046 -
Bda04g00604 216 Gene3D - 90 214 - -
Bda04g00604 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Bda04g00604 216 SUPERFAMILY Thioredoxin-like 1 88 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00604 Bda-Chr4:54662248 Bda08g01187 Bda-Chr8:47879835 5.98E-60 dispersed
Bda04g00604 Bda-Chr4:54662248 Bda12g00050 Bda-Chr12:336677 3.84E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00604 K00799 - nnu:104598999 297.36