Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00641 ATGCGGCGGTTTGACGATCGTAGTCTGACAGTGGTTTCGGTGCTCGGTCGTGGAGCCAAGGGCGTGGTGTTTCTTGCTCGCGATGAAAAGGACGGTGAGCGGCTTGCTTTGAAGATCATTTCTAGGGCTTTGATTGAGAGGAAGGGGAAATCTCTCAATGGCGATGGAGCGGAGTACAGGAGAGTCTGCTTCGAACGAGACGTTCTCCGGCGCTTCCAGCATCCTCTTTTGCCGAGATTGCGTGGAGTTTTCGAGACGGAGAATGTTGTGGGTTATGCCATCAATTATTGCCCTGGCCGCAATCTTAACTGCCTGAGAAAGAAACAGACGGAGAAGATGTTCTCCGATGATGTCATCAGGTTTTACGCGGCAGAATTAGTAATGGCATTGGAGTATGTTCACAGTTTAGGAATCGTATACAGAGATCTGAAGCCAGAAAACATAATGATTCAAGATACAGGCCATATAATGCTCGTAGATTTCGACCTCTCCACAAGCCTCTCTCCCAAGACTCCCAAGCCTTCTCCGAGGCCAAAAGTTTTCTCCACTTCTCAATCCGTCAAGAAGAAGCGATTCTTGTCCTTCAGTCGGTTTTTCAACTCCGGCATTTCACCGGAAGGTTCAGAAACTCCTCCTCCTCCCCGCCATTGTAAACTTAGCGATGAGTCTACCGGGAATAAATCAAACTCCACCGACAAATCAAACTCCACCGAAAAATCCAACTCGACGGACAAATCGAACTCCTTTGTCGGAACGGAGGAGTATGTGGCTCCAGAAATCGTTTCCGGGAACGGCCACGATTTCGCTGTAGACTGGTGGTCCATGGGAGTCGTTCTGTACGAGATGCTGTATGGAACGACGCCGTTCAGAGGATCCAACAGGAAGGAGACGTTCTACAGGATTTTAACCAAGTCGCCAGAGCTGACCGGAGAAGCGACTCCGTTGAGAGACCTTATCAGAAAATTACTGGATAAAGACCCAGACGACAGAATTGACCTTCTCGAAATCAAGGGCCACAATTTTTTCAGCGGGGTAGACTGGGACTCCGTATATCAAATCTCCCGGCCGCCATTCATCCCTGAAGACGAGATCAGCAGCTTTGATGATGTGAACGAAAAAGTAGACGTGGAGGTTATTGTCCAAGAAATATTCGGCCACAAGGAGGCAGGTGAAGTTGGCTGTAATAATGAAAAGCAACATGACAAACCATTGGTGCCTGAGGATCCACATCCAAATAGCCATAATCACAATCATAATCATGTTCATGGTGATCAACCAGAAACTGATGCATTTTATGATTTCTAA 1305 47.66 MRRFDDRSLTVVSVLGRGAKGVVFLARDEKDGERLALKIISRALIERKGKSLNGDGAEYRRVCFERDVLRRFQHPLLPRLRGVFETENVVGYAINYCPGRNLNCLRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENIMIQDTGHIMLVDFDLSTSLSPKTPKPSPRPKVFSTSQSVKKKRFLSFSRFFNSGISPEGSETPPPPRHCKLSDESTGNKSNSTDKSNSTEKSNSTDKSNSFVGTEEYVAPEIVSGNGHDFAVDWWSMGVVLYEMLYGTTPFRGSNRKETFYRILTKSPELTGEATPLRDLIRKLLDKDPDDRIDLLEIKGHNFFSGVDWDSVYQISRPPFIPEDEISSFDDVNEKVDVEVIVQEIFGHKEAGEVGCNNEKQHDKPLVPEDPHPNSHNHNHNHVHGDQPETDAFYDF 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 55169062 55170455 - Bda019619.1 Bda04g00641 5663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00641 434 Pfam Protein kinase domain 240 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00641 434 Pfam Protein kinase domain 11 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00641 434 ProSiteProfiles AGC-kinase C-terminal domain profile. 343 434 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bda04g00641 434 MobiDBLite consensus disorder prediction 223 248 - -
Bda04g00641 434 PANTHER FLIPPASE KINASE 1-RELATED 5 389 - -
Bda04g00641 434 SUPERFAMILY Protein kinase-like (PK-like) 10 377 IPR011009 -
Bda04g00641 434 PANTHER RHO-ASSOCIATED PROTEIN KINASE 1/2-RELATED 5 389 - -
Bda04g00641 434 ProSiteProfiles Protein kinase domain profile. 9 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00641 434 Gene3D Phosphorylase Kinase; domain 1 10 100 - -
Bda04g00641 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Bda04g00641 434 MobiDBLite consensus disorder prediction 390 434 - -
Bda04g00641 434 SMART serkin_6 9 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00641 434 MobiDBLite consensus disorder prediction 203 248 - -
Bda04g00641 434 Gene3D Transferase(Phosphotransferase) domain 1 101 169 - -
Bda04g00641 434 Gene3D Transferase(Phosphotransferase) domain 1 239 361 - -
Bda04g00641 434 MobiDBLite consensus disorder prediction 391 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00641 Bda-Chr4:55169062 Bda10g00538 Bda-Chr10:39191590 2.53E-155 dispersed
Bda02g00646 Bda-Chr2:47436941 Bda04g00641 Bda-Chr4:55169062 6.45E-98 transposed
Bda10g00634 Bda-Chr10:40377022 Bda04g00641 Bda-Chr4:55169062 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69601 PF00069 Pkinase 6.00E-32 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00641 K20714 - zju:107426805 454.136