Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00698 ATGGTAGCAGAAGCCGAGGTTGTTTTGTGTCAACAGAGCGTTTCTGTTCTAGAGGGGGTTCAGTGCTTTGGTAATGGAAGCAATCACCATCGTCGTCTTGTTCGCGAGGTTGAAGACGTGGTCGATAATCCCAATTTCAACCAAGTTCGAGCTTCCGAGTCTGTTTCGGCCGAGTTGTCCGTCTCTGCAGCGGAGTTGGATTCCGACTCATCTCTCGAATCTGTCATTATTCCGTTCAGGCCAAGCATCCGTTCCGGTAGCTTTGCCGACATAGGACCCCGTCGAAGCATGGAAGATGAACACATAAGAATAGATGATCTATCATCACATTTAGGATCACTCTTCCAGTTTCCCAACCCAAGTGCATTTTATGGGGTGTTTGATGGTCATGGAGGACATGAAGCTTCGTCCTTTATGAGAAAAAATGTGATGAGACTCTTTTTTAAAGAAAATTTTCCCCATACTCTACGAGAAGCCGATGAGAATTTTTCGGAAGAACTCGTGGGCTGTTTCCGCCGAGCATTTCTTCTGGCTGATCAAGCTTTGGCTGATGACTCTACTGTGAAAAGATCTTCTGGAACTACAGCTCTGACTGCTCTTATACTCGGAAGGCTTGTAATGGTGGCAAATGCCGGTGATTGCCGAGCCGTTCTTTCGAGGAAAGGAGAAGCAATAGACTTGTCTGAAGATCACAGGCCAATTTACCCACCGGAACGAACCCGAATCGAAGAATCAGGCGGCTTTATCGACGATGGGTATCTAAACGGGGTTTTATCCGTTTCTAGAGCGTTAGGGGACTGGGACGTGAAATCCCCTTATGGGTCATCACCTTCTCCGCTCATAGCCGAACCAGAGTGCAGACAAATGGTTTTAACAGAAGATGACGAGTTTCTAATCATAGCCTGTGACGGGATTTGGGACGTTATGTCTAGTCAGCATGCAGTAAATATCGTTAAACGGGGGCTGAGCCGGTACGATGACCCAGACCGGTGTGCTCGGGACCTAGTCAGGGCGGCTCTACAGCTCCATACTTTTGATAATCTCACTGTGGTGGTGGTCTGCTTTTCTCATCACTTTGCCAGCCCCAGCCAGCCCTCTCGGCCACAGAGGTTAAAACAATGCAACCTCTCCGAAGAGGCGATTTGCAGCCTGAAGAGATGGCTGGACAGCTGTGACAGCCATTGA 1185 48.52 MVAEAEVVLCQQSVSVLEGVQCFGNGSNHHRRLVREVEDVVDNPNFNQVRASESVSAELSVSAAELDSDSSLESVIIPFRPSIRSGSFADIGPRRSMEDEHIRIDDLSSHLGSLFQFPNPSAFYGVFDGHGGHEASSFMRKNVMRLFFKENFPHTLREADENFSEELVGCFRRAFLLADQALADDSTVKRSSGTTALTALILGRLVMVANAGDCRAVLSRKGEAIDLSEDHRPIYPPERTRIEESGGFIDDGYLNGVLSVSRALGDWDVKSPYGSSPSPLIAEPECRQMVLTEDDEFLIIACDGIWDVMSSQHAVNIVKRGLSRYDDPDRCARDLVRAALQLHTFDNLTVVVVCFSHHFASPSQPSRPQRLKQCNLSEEAICSLKRWLDSCDSH 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 55785709 55787623 + Bda019680.1 Bda04g00698 5720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00698 394 SMART PP2C_SIG_2 99 355 IPR001932 -
Bda04g00698 394 SUPERFAMILY PP2C-like 76 356 IPR036457 -
Bda04g00698 394 CDD PP2Cc 83 355 IPR001932 -
Bda04g00698 394 Gene3D - 61 360 IPR036457 -
Bda04g00698 394 Pfam Protein phosphatase 2C 93 347 IPR001932 -
Bda04g00698 394 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Bda04g00698 394 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 373 - -
Bda04g00698 394 ProSiteProfiles PPM-type phosphatase domain profile. 84 355 IPR001932 -
Bda04g00698 394 SMART PP2C_4 74 353 IPR001932 -
Bda04g00698 394 PANTHER PROTEIN PHOSPHATASE 2C 1 373 IPR015655 GO:0004722|GO:0006470
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00698 Bda05g00413 CCT
Bda04g00698 Bda05g00413 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00698 Bda-Chr4:55785709 Bda11g00979 Bda-Chr11:9516047 1.31E-104 dispersed
Bda12g00106 Bda-Chr12:854926 Bda04g00698 Bda-Chr4:55785709 5.52E-151 wgd
Bda04g00698 Bda-Chr4:55785709 Bda05g00413 Bda-Chr5:49739424 4.53E-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00698 K14803 - pvy:116138071 483.411