Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda04g00698 | ATGGTAGCAGAAGCCGAGGTTGTTTTGTGTCAACAGAGCGTTTCTGTTCTAGAGGGGGTTCAGTGCTTTGGTAATGGAAGCAATCACCATCGTCGTCTTGTTCGCGAGGTTGAAGACGTGGTCGATAATCCCAATTTCAACCAAGTTCGAGCTTCCGAGTCTGTTTCGGCCGAGTTGTCCGTCTCTGCAGCGGAGTTGGATTCCGACTCATCTCTCGAATCTGTCATTATTCCGTTCAGGCCAAGCATCCGTTCCGGTAGCTTTGCCGACATAGGACCCCGTCGAAGCATGGAAGATGAACACATAAGAATAGATGATCTATCATCACATTTAGGATCACTCTTCCAGTTTCCCAACCCAAGTGCATTTTATGGGGTGTTTGATGGTCATGGAGGACATGAAGCTTCGTCCTTTATGAGAAAAAATGTGATGAGACTCTTTTTTAAAGAAAATTTTCCCCATACTCTACGAGAAGCCGATGAGAATTTTTCGGAAGAACTCGTGGGCTGTTTCCGCCGAGCATTTCTTCTGGCTGATCAAGCTTTGGCTGATGACTCTACTGTGAAAAGATCTTCTGGAACTACAGCTCTGACTGCTCTTATACTCGGAAGGCTTGTAATGGTGGCAAATGCCGGTGATTGCCGAGCCGTTCTTTCGAGGAAAGGAGAAGCAATAGACTTGTCTGAAGATCACAGGCCAATTTACCCACCGGAACGAACCCGAATCGAAGAATCAGGCGGCTTTATCGACGATGGGTATCTAAACGGGGTTTTATCCGTTTCTAGAGCGTTAGGGGACTGGGACGTGAAATCCCCTTATGGGTCATCACCTTCTCCGCTCATAGCCGAACCAGAGTGCAGACAAATGGTTTTAACAGAAGATGACGAGTTTCTAATCATAGCCTGTGACGGGATTTGGGACGTTATGTCTAGTCAGCATGCAGTAAATATCGTTAAACGGGGGCTGAGCCGGTACGATGACCCAGACCGGTGTGCTCGGGACCTAGTCAGGGCGGCTCTACAGCTCCATACTTTTGATAATCTCACTGTGGTGGTGGTCTGCTTTTCTCATCACTTTGCCAGCCCCAGCCAGCCCTCTCGGCCACAGAGGTTAAAACAATGCAACCTCTCCGAAGAGGCGATTTGCAGCCTGAAGAGATGGCTGGACAGCTGTGACAGCCATTGA | 1185 | 48.52 | MVAEAEVVLCQQSVSVLEGVQCFGNGSNHHRRLVREVEDVVDNPNFNQVRASESVSAELSVSAAELDSDSSLESVIIPFRPSIRSGSFADIGPRRSMEDEHIRIDDLSSHLGSLFQFPNPSAFYGVFDGHGGHEASSFMRKNVMRLFFKENFPHTLREADENFSEELVGCFRRAFLLADQALADDSTVKRSSGTTALTALILGRLVMVANAGDCRAVLSRKGEAIDLSEDHRPIYPPERTRIEESGGFIDDGYLNGVLSVSRALGDWDVKSPYGSSPSPLIAEPECRQMVLTEDDEFLIIACDGIWDVMSSQHAVNIVKRGLSRYDDPDRCARDLVRAALQLHTFDNLTVVVVCFSHHFASPSQPSRPQRLKQCNLSEEAICSLKRWLDSCDSH | 394 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 55785709 | 55787623 | + | Bda019680.1 | Bda04g00698 | 5720 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda04g00698 | 394 | SMART | PP2C_SIG_2 | 99 | 355 | IPR001932 | - | |
Bda04g00698 | 394 | SUPERFAMILY | PP2C-like | 76 | 356 | IPR036457 | - | |
Bda04g00698 | 394 | CDD | PP2Cc | 83 | 355 | IPR001932 | - | |
Bda04g00698 | 394 | Gene3D | - | 61 | 360 | IPR036457 | - | |
Bda04g00698 | 394 | Pfam | Protein phosphatase 2C | 93 | 347 | IPR001932 | - | |
Bda04g00698 | 394 | ProSitePatterns | PPM-type phosphatase domain signature. | 123 | 131 | IPR000222 | GO:0043169 | |
Bda04g00698 | 394 | PANTHER | PROTEIN PHOSPHATASE 2C 49-RELATED | 1 | 373 | - | - | |
Bda04g00698 | 394 | ProSiteProfiles | PPM-type phosphatase domain profile. | 84 | 355 | IPR001932 | - | |
Bda04g00698 | 394 | SMART | PP2C_4 | 74 | 353 | IPR001932 | - | |
Bda04g00698 | 394 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 373 | IPR015655 | GO:0004722|GO:0006470 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda04g00698 | Bda05g00413 | CCT | |
Bda04g00698 | Bda05g00413 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00698 | Bda-Chr4:55785709 | Bda11g00979 | Bda-Chr11:9516047 | 1.31E-104 | dispersed | |
Bda12g00106 | Bda-Chr12:854926 | Bda04g00698 | Bda-Chr4:55785709 | 5.52E-151 | wgd | |
Bda04g00698 | Bda-Chr4:55785709 | Bda05g00413 | Bda-Chr5:49739424 | 4.53E-141 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda04g00698 | K14803 | - | pvy:116138071 | 483.411 |