Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00707 ATGGGTTTTTTCTGTTGCGGCGGAGATGATGATGTCCAGTACACTCCTAATAATGGAGGGGTACATGCAAGGAAAATGCAAGCAGGTAATGACAGTGGTAACCGGCACCCTGAAATTGCGCCTAAGGTCCCACAAATTGTAAAACTTCAGCCTATTGAAGTCCCGGCCATACGAGCGGATGAACTGAACGAAGTTACAAATAACTTCGGAACAGATTGTTTGATCGGAGAAGGTTCATTTGGAAGAGTTTACCATGGCGTTCTGAGAAATGGTCAACAAGCAGCAATTAAAAAGTTAGATGCAAACAAACAACCCAATAACGAATTCTTAGCCGAGATTTCATTGGTTTCGAGGCTGAAGCATGGAAATTTTGTCCAATTACTCGGCTATTGCGTCGACGGGAATTCCCGTATCCTTGCCTATGAGTTCGCATCGAATGGATCCCTTCATGACATTTTACATGGTAGGAAAGGCGTGAAAGGTGCAGAGCCAGGTCCGGTTCTGACCTGGTCGCAACGAGTGAAAATTGCTGTGGGGGCTGCCAGAGGGCTTGAGTACTTGCATGAAAAAGCCGATCCTCGTGTCATTCATCGGAATATCAAGTCCAGCAATGTGCTAATCTTTGACGACGATATTGCTAAAATTGCTGACTTTGATTTATCGAATCAAGCTCCAGATATGGCAGCTCGTCTTCATTCTACCCGTGTTCTTGGCACCTTTGGTTACCACGCTCCAGAATATGCAATGACCGGCCAGCTGAATGCCAAGAGTGATGTCTATAGCTTCGGTGTCGTTTTGCTCGAACTCTTGACGGGTAGAAAGCCAGTCGATCCTACATTGCCTCGAGGGCAGCAAAGTCTCGTCACTTGGGCTACTCCGAAACTCAGCGAAGACAAAGTCAAGCAGTGTGTCGATGCAAGACTAGGAGGAGATTACCCTCCGAAGGCTGTCGCAAAGTTGGCTGCAGTGGCTGCCTTGTGTGTGCAATACGAGGCAGATTTTCGACCAAACATGAGCATCGTGGTCAAGGCCCTTCAGCCCCTGTTAGTCGCCCGAACCGGTGCTGCAGCTGATACACCAAGCTTG 1086 47.88 MGFFCCGGDDDVQYTPNNGGVHARKMQAGNDSGNRHPEIAPKVPQIVKLQPIEVPAIRADELNEVTNNFGTDCLIGEGSFGRVYHGVLRNGQQAAIKKLDANKQPNNEFLAEISLVSRLKHGNFVQLLGYCVDGNSRILAYEFASNGSLHDILHGRKGVKGAEPGPVLTWSQRVKIAVGAARGLEYLHEKADPRVIHRNIKSSNVLIFDDDIAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDPTLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLVARTGAAADTPSL 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 55861787 55864599 + Bda033594 Bda04g00707 5729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00707 362 Gene3D Phosphorylase Kinase; domain 1 36 143 - -
Bda04g00707 362 Gene3D Transferase(Phosphotransferase) domain 1 144 357 - -
Bda04g00707 362 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672|GO:0006468
Bda04g00707 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 357 - -
Bda04g00707 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 357 - -
Bda04g00707 362 SUPERFAMILY Protein kinase-like (PK-like) 51 345 IPR011009 -
Bda04g00707 362 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Bda04g00707 362 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00707 Bda10g00694 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00707 Bda-Chr4:55861787 Bda13g00238 Bda-Chr13:2968627 1.95E-161 dispersed
Bda11g00487 Bda-Chr11:5151101 Bda04g00707 Bda-Chr4:55861787 5.11E-18 dispersed
Bda11g00468 Bda-Chr11:4929788 Bda04g00707 Bda-Chr4:55861787 2.50E-166 transposed
Bda10g00694 Bda-Chr10:41259025 Bda04g00707 Bda-Chr4:55861787 2.27E-157 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69604 PF07714 PK_Tyr_Ser-Thr 9.50E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00707 K13436 - tcc:18613791 572.778