Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00737 ATGGCAGACCCTTACACCAATTTATTCAACGGCTGGTTCAACTTCATGCCTGTAGCTCCTCATTTTTCTTCTCCCACTTCTTACTACTCAGAACCCTCTTTTAATTTCTCTGCTCCTTTTCCCAGCTTGAACAAGGACGACGACGACATCATAATTACTAGTCAAAGTACTGCTAATCCCTCCTTCCAATCTCATTCCTTCTTTCCGCCGTTATCTGATCTCTCGACTCCTTCAATACAAGCTCTTCCTTTGATAAACCAATTAAGCACAGATATTTACGAAAACTCTGGCAGTGCAGCAATGGAGGAGAAAGAGGCGAAGGATTTGGCCAACGAAGAGGACGATGAATCCTTGTCTGTGGCTCTAAGCATAGGCCTTCCTTGCCCTAATTTAGATTCAGAAACAAAGGAAATTATTTCGCCTTCATTTTCGTGTTCGGGCGAGAAGGATGACAGCAGTTTGGTATCAGATTACCCAATGTATAGACTGAACAAGGGCCAGTACTGGATTCCTACCCCTTCTCAGATTCTGATTGGTCCTACTCAATTTTCATGTCCACTTTGCTCCAAGGCTTTCAACAGATACAATAATCTCCAGATGCACATGTGGGGCCATGGCTCACAATACAGAAAAGGGCCAGACTCTCTGAAAGGAATCCAGCCAACCGCCATGTTAAAGCTGCCTTGCTACTGCTGCGCAAATGGCTGCAAATACAACATCGACCACTCTCGATCAAGGCCGCTCAAAGATTTCAGAACTCTGCAAACCCATTACAAGAGAAAGCACGGGACTAAACCCTTCAGTTGCAGGAAATGCAGCAAACCATTTGCAGTGAAAGGCGACTGGAGAACCCACGAGAAGAACTGTGGGAAAATTTGGTATTGCTCTTGTGGGTCTGATTTTAAGCACAAAAGATCGCTGAAGGATCACGTTAGGGCTTTCGGCCATAGCCATGAAGCTGTCGGCCTTGATTGCTTTGAAGAAGACAACGATCCTTCGTCTGAGGTGGAACAAGATGGTTCTAGTTTAACGTGA 1035 45.12 MADPYTNLFNGWFNFMPVAPHFSSPTSYYSEPSFNFSAPFPSLNKDDDDIIITSQSTANPSFQSHSFFPPLSDLSTPSIQALPLINQLSTDIYENSGSAAMEEKEAKDLANEEDDESLSVALSIGLPCPNLDSETKEIISPSFSCSGEKDDSSLVSDYPMYRLNKGQYWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPDSLKGIQPTAMLKLPCYCCANGCKYNIDHSRSRPLKDFRTLQTHYKRKHGTKPFSCRKCSKPFAVKGDWRTHEKNCGKIWYCSCGSDFKHKRSLKDHVRAFGHSHEAVGLDCFEEDNDPSSEVEQDGSSLT 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 56575275 56578227 + Bda019716.1 Bda04g00737 5759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00737 344 Gene3D Classic Zinc Finger 224 318 - -
Bda04g00737 344 PANTHER ZINC FINGER PROTEIN WIP2 1 339 IPR043584 GO:0003700|GO:0010468
Bda04g00737 344 ProSiteProfiles Zinc finger C2H2 type domain profile. 183 210 IPR013087 -
Bda04g00737 344 PANTHER ZINC FINGER PROTEIN WIP2-LIKE 1 339 - -
Bda04g00737 344 Gene3D Classic Zinc Finger 182 205 - -
Bda04g00737 344 SUPERFAMILY beta-beta-alpha zinc fingers 183 287 IPR036236 -
Bda04g00737 344 SMART c2h2final6 293 316 IPR013087 -
Bda04g00737 344 SMART c2h2final6 183 205 IPR013087 -
Bda04g00737 344 SMART c2h2final6 267 287 IPR013087 -
Bda04g00737 344 ProSitePatterns Zinc finger C2H2 type domain signature. 185 205 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00598 Bda-Chr3:4956923 Bda04g00737 Bda-Chr4:56575275 2.55E-132 dispersed
Bda04g00737 Bda-Chr4:56575275 Bda11g00677 Bda-Chr11:6795926 3.37E-125 dispersed
Bda09g01411 Bda-Chr9:45986994 Bda04g00737 Bda-Chr4:56575275 2.59E-105 transposed
Bda10g00726 Bda-Chr10:41686118 Bda04g00737 Bda-Chr4:56575275 3.26E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15836 None None None None Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00737 - - qsu:111986391 427.557