Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00764 ATGGGTGCACCAAAGAAAATTGGGTCGAGGATTTCTGACGACTCTGAGGAGTTGGCTCGTGTTTCCTTGCAGGCCATCCTTCTTGCTGATAGCTTTGCCACCAAGTTTCAGCCCATAACTCTCGAACGGCCTAAGGTATTACTTCCACTTGTGAATGTCCCAATGATAAATTATACCTTAGCATGGCTTGAATCTTCCGGTGTTGAAGAAGTGTTTGTATTTTGCTGTGCTCATTCAAGACAAGTAATTGATTATTTGGAGAATTCTGAATGGTTCTCTCAACCAGAGTTCTCGGTCACAACAATAGAATCCCACAATTCTGTGAGTGCTGGAGATGCTCTGCGCTTAATCTATGAAAAGAATGTGATACATGGAGACTTTATCCTTATCACAGGAGATACAATAAGCAACATGTCACTTTCACAAGCTCTTCAGGAACACAAGGAAAGAAAGAAAAGAGATAGCAATGCAGTAATGACCATGATTATCAAACAATCGAAGCCCTCCCCTATCACTCACCAATCTCGTCTTGGTACTGATGAGCTGTTTATGGCAGTAGATCCTGACACTAAGCAACTACTATATTATGAGGATAGAGCGGACCAATCAAAAGGGGCTATATATCTTGATAAGCTATTACTTATGGATAATCCTTTAATTTCTCTTCACAATGACAAACAGGATTGCTATATAGATATTTGTTCTCCAGAAGTTCTCAGTCTTTTCACAGATAACTTTGACTATCAGCATCTTCGACGCCACTTTGTCAAAGGATTGCTTGTCGATGATATCATGGGTTACAAGATCTTTACACATGATATTCACTCTAGCTATGCGGCTAGGATTGATAATTTTGGAAGCTATGACGCAATTAGCAAGGACATTATACAGAGGTGGTCATATCCATTCGTTCCCGATGTTAAATTCTTTGGAAATTCCACGACAAAACTTGAAAGACAGGGAATGTATAGAGCTTCAGATATTAGGCAAGCTCGTTCTGCTCTAATAGGTCCTTGTACTGTTATCGGAAAGAACACTGAAATCGGGTGCAACACCAAAATTTCAAATTCAGTTGTTGGACAAGGATGCAAAATTGGATCAAACGTTTTGATAGAAGGTTCTTACATATGGGATAATGTTACTATCGAGGACGGCTGTAAACTAAGGCATGCAATTGTTTGCGATGGAGTGACCCTGAGATTGGGAGCTGAACTAGAACCTGGTGTAGTTTTGTCTTTCAATGTTGTTATAGGTCAACAATTTGTTGTTCCTGCATATTCAAAGGTGTCAATGTTTCAGCAACCAACCAAGCTAGATAGTGATGAGGAGCTAGAATATGCTGATAATAGCAGTGTTATTATTGAAATCCCAGGGACAACAGACATGTATAATGGAGAGTCGACTTTCCAGACACATGAGCTTGGTACTGGTGGTGTTGGACATGTATGGTCAGATTTTGAAGGAAACATTGAGGAAAGATGGAGGCACTCAGTTGCACCCATTCCTGCGGATAAAGTTGCTGAGGCAATGCAAGCCAGAGATGATGACTTTGAGTTGTCTGCTCAAGATGGAGGCCTTCTTCCTCCTTCAGGAGAGTTGAAACCCAGTTCCAATGATTCTGAAGATGATGATAATGAAGATTCTAGGGACGACTCCACTTACTTTGAAAAAGAGGTGGAAGCAACTTTCTTAAGAGCTGTGCACGAAAATATTAAAGTAGACAACGTAATTTTGGAAGTGAACTCGTTACGATTATCATATAATAAAGAAGCTGCGGATTGTGCTGGGGCAATATTTTTTTCATTAATAAAATATTCCCTAGAAACTCCACATAGTTCTGCTAGTGAATTGTTGCAAAATGCTACAAGTACAATTACAAAATGGAAAAAACTTCTCAAGTCTTACCTTGCTGACTTGGATGAGGAGATAGAAGTAATTTTGAAATTTGAAGAGATGTGTGTGGAATCTGCCAAGGAATTTAATCCATACTTCGCGAAGATATTGTGTCACTTGTACGACCAAGAAATAATTCACGAGGAGGCCATTTTACGGTGGGAAGACGAGAAGAAGGACGCAGAGGAATCAGATAAAATTTTCGTCAAGCAATCTGAGAAATTTATACAATGGTTGAGAGAGGCATCAGAGGAGGAAGAAGAAGAAGAAGAGGGAGGAGAAGATGAATGA 2184 39.84 MGAPKKIGSRISDDSEELARVSLQAILLADSFATKFQPITLERPKVLLPLVNVPMINYTLAWLESSGVEEVFVFCCAHSRQVIDYLENSEWFSQPEFSVTTIESHNSVSAGDALRLIYEKNVIHGDFILITGDTISNMSLSQALQEHKERKKRDSNAVMTMIIKQSKPSPITHQSRLGTDELFMAVDPDTKQLLYYEDRADQSKGAIYLDKLLLMDNPLISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHDIHSSYAARIDNFGSYDAISKDIIQRWSYPFVPDVKFFGNSTTKLERQGMYRASDIRQARSALIGPCTVIGKNTEIGCNTKISNSVVGQGCKIGSNVLIEGSYIWDNVTIEDGCKLRHAIVCDGVTLRLGAELEPGVVLSFNVVIGQQFVVPAYSKVSMFQQPTKLDSDEELEYADNSSVIIEIPGTTDMYNGESTFQTHELGTGGVGHVWSDFEGNIEERWRHSVAPIPADKVAEAMQARDDDFELSAQDGGLLPPSGELKPSSNDSEDDDNEDSRDDSTYFEKEVEATFLRAVHENIKVDNVILEVNSLRLSYNKEAADCAGAIFFSLIKYSLETPHSSASELLQNATSTITKWKKLLKSYLADLDEEIEVILKFEEMCVESAKEFNPYFAKILCHLYDQEIIHEEAILRWEDEKKDAEESDKIFVKQSEKFIQWLREASEEEEEEEEGGEDE 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 56835668 56843299 - Bda019747.1 Bda04g00764 5786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00764 727 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Bda04g00764 727 MobiDBLite consensus disorder prediction 520 552 - -
Bda04g00764 727 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 11 304 IPR029044 -
Bda04g00764 727 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 369 IPR029044 -
Bda04g00764 727 CDD W2_eIF2B_epsilon 555 714 IPR044123 GO:0005085|GO:0031369
Bda04g00764 727 Gene3D Hexapeptide repeat proteins 305 441 - -
Bda04g00764 727 SUPERFAMILY Trimeric LpxA-like enzymes 268 430 IPR011004 -
Bda04g00764 727 SUPERFAMILY ARM repeat 555 713 IPR016024 -
Bda04g00764 727 Pfam Nucleotidyl transferase 25 168 IPR005835 GO:0009058|GO:0016779
Bda04g00764 727 ProSiteProfiles W2 domain profile. 549 720 IPR003307 GO:0005515
Bda04g00764 727 SMART 542_3 629 716 IPR003307 GO:0005515
Bda04g00764 727 CDD LbH_eIF2B_epsilon 341 419 - -
Bda04g00764 727 Gene3D - 542 721 - -
Bda04g00764 727 Pfam eIF4-gamma/eIF5/eIF2-epsilon 641 720 IPR003307 GO:0005515
Bda04g00764 727 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 12 721 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00764 Bda-Chr4:56835668 Bda11g01433 Bda-Chr11:19447973 0 dispersed
Bda04g00764 Bda-Chr4:56835668 Bda09g00482 Bda-Chr9:6307787 2.52E-15 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00764 K03240 - zju:107419573 1124.38