Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00768 ATGGCGCCCGAAATGGAGCGAAATGAATTCGTTTTCAGGTCGAAGCTTCCCGATATTTGGGTCCCGAAACATCTCCCTCTCCACGCCTACTGCTTCGAGAACATAGCCGAGGTCGGGTCGCGGCCGTGTTTGATAAACGCGGCCACCGGAGAGAATTACACTTACGACGAAGTTCGGCTGACGGCGATCAAGATCGCGGCGGGGCTGGAGAAACTCGGTTTTGGTAAAGGCGACGTGGTGATGAACTTGCTTCCGAATTCGCCGGAATTTGCCTTTTTCTTCCTCGCTGCTTCTTTTCTCGGCGCGATCATGACCGCCGCGAACCCGTTTTTCACTCCCGCCGAGATCGAAAAGCAAGCCAAAGCTTCGAAAGCGAAGATCATTGTAACTCAAGCTCTGTTCTACCCGAAAGTAAGGCACTTAGCTCAAGAATCTGAGCCAGATAACGTGAAGATAATCTGTACAGATTCACCCGTAGATGGCTGCCTGAAACTTTCTTCGCTGATTGAAGAAGAAGAAGATGCAGCAATACCGAACGTAAAAATCAGCCCAGACGACGTCGTTGCACTACCTTATTCTTCTGGCACAACAGGATTGCCAAAGGGAGTGATGTTGACCCACAAGGGGCTAGTAACCAGTATATCCCAGCAGGTAGATGGAGAGAATCCAAACCTATACTACCACAAAGACGACGTCGTTCTCTGCGTCTTGCCTCTCTTCCATATTTACTCTCTGAACTCCGTCTTCCTTTGCGCTCTGAGGAGGGGAGCTTCGGTTCTGATTATGCAGAAGTACGAAATAGTTTCGCTGCTGCAAATGATCGAGAAGTACAGGGTTTCTATTGTTCCGGTCGTGCCTCCGATCGTGTTAGCCATGGCCAGGTCGCCGGAGGTTGATAAGTACGATCTTTCCTCTATTCGGGTGCTGAAATCTGGAGGAGCTCCTCTGGGGAAGGAGCTGGAGGATAATGTTAAAGCCAAGTTTCCTAAGGCTGTGTTTGGTCAGGGTTATGGAATGACGGAGGCGGGGCCGGTTTTGACGATGAGTTTAGGGTTTGCGAAGCAGCCGTTTAAAGTAAAGCCCGGCGCCTGCGGGAGCGTTGTAAGAAACGCTGAGATGAAGATCGTCGACGCTGAAACTGGAGCGTCTTTGCCTCGTACTTCTCCGGGGGAAATATGCATTAGAGGAGACCAAATCATGAAAGGTTATCTTAACGATCCGGAGGCGACTGCGAGAACGATTGACGAAGAAGGATGGCTGCACACCGGCGACATAGGCTTCCTAGACGAAGACGACGAGCTTTACATTGTCGATAGGCTGAAGGAGCTCATCAAATTCCGAGCCTTTCAGGTCGCTCCGGCTGAGCTTGAAGCTATTTTACTCACCCACCCCTCCGTCGCTGACGCCGCCGTCGTGCCCATGAAAGACGATCAAGCCGGAGAAGTTCCCGTTGCATTCGTGGTCTCGCCGGAAAAATCTGAAGTCACAGAGGATGAAATAAAGCAGTTTCTGTCAAAACAGGTGGTATTTTACAAAAGATTAAACCGAGTATTTTTCATCGACGCAATACCGAAGTCGCCGTCCGGGAAGATATTGAGGAAAGAATTGAGAGCGAAACTGGTCAACGGCGTTTCCATTTGA 1641 50.27 MAPEMERNEFVFRSKLPDIWVPKHLPLHAYCFENIAEVGSRPCLINAATGENYTYDEVRLTAIKIAAGLEKLGFGKGDVVMNLLPNSPEFAFFFLAASFLGAIMTAANPFFTPAEIEKQAKASKAKIIVTQALFYPKVRHLAQESEPDNVKIICTDSPVDGCLKLSSLIEEEEDAAIPNVKISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSISQQVDGENPNLYYHKDDVVLCVLPLFHIYSLNSVFLCALRRGASVLIMQKYEIVSLLQMIEKYRVSIVPVVPPIVLAMARSPEVDKYDLSSIRVLKSGGAPLGKELEDNVKAKFPKAVFGQGYGMTEAGPVLTMSLGFAKQPFKVKPGACGSVVRNAEMKIVDAETGASLPRTSPGEICIRGDQIMKGYLNDPEATARTIDEEGWLHTGDIGFLDEDDELYIVDRLKELIKFRAFQVAPAELEAILLTHPSVADAAVVPMKDDQAGEVPVAFVVSPEKSEVTEDEIKQFLSKQVVFYKRLNRVFFIDAIPKSPSGKILRKELRAKLVNGVSI 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 57173261 57176099 - Bda019757.1 Bda04g00768 5790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00768 546 Pfam AMP-binding enzyme 35 446 IPR000873 -
Bda04g00768 546 Gene3D - 441 542 IPR045851 -
Bda04g00768 546 CDD 4CL 21 536 - -
Bda04g00768 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 541 - -
Bda04g00768 546 Gene3D - 5 440 IPR042099 -
Bda04g00768 546 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Bda04g00768 546 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 541 - -
Bda04g00768 546 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Bda04g00768 546 SUPERFAMILY Acetyl-CoA synthetase-like 11 542 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01352 Bda-Chr3:48786072 Bda04g00768 Bda-Chr4:57173261 0 dispersed
Bda04g00768 Bda-Chr4:57173261 Bda05g00249 Bda-Chr5:42387458 0 dispersed
Bda11g01605 Bda-Chr11:49672773 Bda04g00768 Bda-Chr4:57173261 4.73E-105 dispersed
Bda02g00282 Bda-Chr2:41425929 Bda04g00768 Bda-Chr4:57173261 0 transposed
Bda04g01132 Bda-Chr4:62114168 Bda04g00768 Bda-Chr4:57173261 5.72E-67 transposed
Bda10g00821 Bda-Chr10:42620808 Bda04g00768 Bda-Chr4:57173261 2.02E-34 transposed
Bda08g00048 Bda-Chr8:360767 Bda04g00768 Bda-Chr4:57173261 5.36E-16 transposed
Bda10g00754 Bda-Chr10:41951047 Bda04g00768 Bda-Chr4:57173261 0 wgd
Bda12g00551 Bda-Chr12:9109960 Bda04g00768 Bda-Chr4:57173261 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00768 K01904 - jre:108986343 815.453