Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda04g00785 | ATGGAGAAAAAAAAGTATCCGATCGGACCAGAGCATTATACTCTGTATGAGGAGGTGGGCCAAGGTGCGAGCGCTTCAGTTCACCGTGCTTTTTGTAAACCTTTGGAGGAGATCGTAGCCATAAAGATCCTAGATTTTGAACGCGACAATATCGATTTGAACAATATATCTCGAGAAGCTCAAATAATGATCCTGGTTGACCATCCTAATGTCCTCAAATCACACTGCTCTTTTGTTAGCGACCATAATTTGTGGGTCGTCATGCCATTCATGTCTGGTGGATCATGTCTCCACATATTGAAAGCTGCATATCCAGATGGTTTTGAAGAAGTAGTTATAGCAACAGTATTGCGTGAGGCATTGAAGGGTTTAGAGTATCTTCATCATCATGGGCACATACATCGAGATGTGAAAGCTGGAAATATCCTTATCGATACACGAGGTGCGATCAAGTTGGGTGATTTTGGAGTGTCTGCTTGCCTTTTTGATTCAGGTGATAGGCAACGCGTGAGGAATACATTTGTTGGGACACCATGCTGGATGGCGCCCGAGGTTATGGAACAACTGCATGGCTACGACTTAAAAGCTGACATATGGTCTTTTGGCATAACTGCATTAGAACTTGCCCATGGCCATGCTCCTTTCTCAAAGTATCCTCCAATGAAGGTACTGTTGATGACCTTGCAAAATGCTCCTCCTGGTCTTGATTACGAGAGGGATAAAAAATTCTCTAAGTCTTTTAAGCAGATGATTGCAAGTTGTTTGGTGAAAGATCCATCTAAACGTCCATCTGCACAGAAGTTGTTGAAACATTCTTTTTTCAAGCAAGCTCGATCATATGAATATATAGAGCGCTCTCTGTTAGAGGGCCTGCCTGCTCTTGGTGATCGTATGGAAGCCCTTAAGAGAAAGGAAGAAGATATGCTTGCCCAAAAGAAAATGCCAGATGGGCAAAAGGAGGAAATTTCACAGAATGAATATAAACGAGGAATAAGTGGATGGAATTTCAATCTTGAAGATGTGAAGGCGCAAGCATCATTGATCCAGGATGTTGATGATCCCATTTCTGATAATAATCTAGGTGGGATCTCTAATGCTTTATCCGCATATGATGGTCAAGAAAAGCAATCACAAGGTTCTTCTGAAGTTACAGATGTGGTATGTCTACTATATTCATGA | 1179 | 41.82 | MEKKKYPIGPEHYTLYEEVGQGASASVHRAFCKPLEEIVAIKILDFERDNIDLNNISREAQIMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATVLREALKGLEYLHHHGHIHRDVKAGNILIDTRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLHGYDLKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSAQKLLKHSFFKQARSYEYIERSLLEGLPALGDRMEALKRKEEDMLAQKKMPDGQKEEISQNEYKRGISGWNFNLEDVKAQASLIQDVDDPISDNNLGGISNALSAYDGQEKQSQGSSEVTDVVCLLYS | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 57781203 | 57785026 | + | Bda019781.1 | Bda04g00785 | 5807 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda04g00785 | 392 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 90 | - | - | |
Bda04g00785 | 392 | ProSitePatterns | Protein kinases ATP-binding region signature. | 19 | 42 | IPR017441 | GO:0005524 | |
Bda04g00785 | 392 | SMART | serkin_6 | 13 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda04g00785 | 392 | Pfam | Protein kinase domain | 13 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda04g00785 | 392 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 1 | 379 | - | - | |
Bda04g00785 | 392 | Gene3D | Transferase(Phosphotransferase) domain 1 | 94 | 328 | - | - | |
Bda04g00785 | 392 | ProSiteProfiles | Protein kinase domain profile. | 13 | 274 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda04g00785 | 392 | CDD | STKc_OSR1_SPAK | 11 | 274 | - | - | |
Bda04g00785 | 392 | SUPERFAMILY | Protein kinase-like (PK-like) | 11 | 286 | IPR011009 | - | |
Bda04g00785 | 392 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 1 | 379 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00785 | Bda-Chr4:57781203 | Bda13g01619 | Bda-Chr13:39677955 | 0 | dispersed | |
Bda04g00785 | Bda-Chr4:57781203 | Bda01g01279 | Bda-Chr1:48193562 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69606 | PF00069 | Pkinase | 8.30E-60 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda04g00785 | K08835 | - | jre:108985864 | 703.36 |