Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00785 ATGGAGAAAAAAAAGTATCCGATCGGACCAGAGCATTATACTCTGTATGAGGAGGTGGGCCAAGGTGCGAGCGCTTCAGTTCACCGTGCTTTTTGTAAACCTTTGGAGGAGATCGTAGCCATAAAGATCCTAGATTTTGAACGCGACAATATCGATTTGAACAATATATCTCGAGAAGCTCAAATAATGATCCTGGTTGACCATCCTAATGTCCTCAAATCACACTGCTCTTTTGTTAGCGACCATAATTTGTGGGTCGTCATGCCATTCATGTCTGGTGGATCATGTCTCCACATATTGAAAGCTGCATATCCAGATGGTTTTGAAGAAGTAGTTATAGCAACAGTATTGCGTGAGGCATTGAAGGGTTTAGAGTATCTTCATCATCATGGGCACATACATCGAGATGTGAAAGCTGGAAATATCCTTATCGATACACGAGGTGCGATCAAGTTGGGTGATTTTGGAGTGTCTGCTTGCCTTTTTGATTCAGGTGATAGGCAACGCGTGAGGAATACATTTGTTGGGACACCATGCTGGATGGCGCCCGAGGTTATGGAACAACTGCATGGCTACGACTTAAAAGCTGACATATGGTCTTTTGGCATAACTGCATTAGAACTTGCCCATGGCCATGCTCCTTTCTCAAAGTATCCTCCAATGAAGGTACTGTTGATGACCTTGCAAAATGCTCCTCCTGGTCTTGATTACGAGAGGGATAAAAAATTCTCTAAGTCTTTTAAGCAGATGATTGCAAGTTGTTTGGTGAAAGATCCATCTAAACGTCCATCTGCACAGAAGTTGTTGAAACATTCTTTTTTCAAGCAAGCTCGATCATATGAATATATAGAGCGCTCTCTGTTAGAGGGCCTGCCTGCTCTTGGTGATCGTATGGAAGCCCTTAAGAGAAAGGAAGAAGATATGCTTGCCCAAAAGAAAATGCCAGATGGGCAAAAGGAGGAAATTTCACAGAATGAATATAAACGAGGAATAAGTGGATGGAATTTCAATCTTGAAGATGTGAAGGCGCAAGCATCATTGATCCAGGATGTTGATGATCCCATTTCTGATAATAATCTAGGTGGGATCTCTAATGCTTTATCCGCATATGATGGTCAAGAAAAGCAATCACAAGGTTCTTCTGAAGTTACAGATGTGGTATGTCTACTATATTCATGA 1179 41.82 MEKKKYPIGPEHYTLYEEVGQGASASVHRAFCKPLEEIVAIKILDFERDNIDLNNISREAQIMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAYPDGFEEVVIATVLREALKGLEYLHHHGHIHRDVKAGNILIDTRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLHGYDLKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSAQKLLKHSFFKQARSYEYIERSLLEGLPALGDRMEALKRKEEDMLAQKKMPDGQKEEISQNEYKRGISGWNFNLEDVKAQASLIQDVDDPISDNNLGGISNALSAYDGQEKQSQGSSEVTDVVCLLYS 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 57781203 57785026 + Bda019781.1 Bda04g00785 5807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00785 392 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Bda04g00785 392 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Bda04g00785 392 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00785 392 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00785 392 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 379 - -
Bda04g00785 392 Gene3D Transferase(Phosphotransferase) domain 1 94 328 - -
Bda04g00785 392 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00785 392 CDD STKc_OSR1_SPAK 11 274 - -
Bda04g00785 392 SUPERFAMILY Protein kinase-like (PK-like) 11 286 IPR011009 -
Bda04g00785 392 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 379 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00785 Bda-Chr4:57781203 Bda13g01619 Bda-Chr13:39677955 0 dispersed
Bda04g00785 Bda-Chr4:57781203 Bda01g01279 Bda-Chr1:48193562 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69606 PF00069 Pkinase 8.30E-60 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00785 K08835 - jre:108985864 703.36