Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda04g00787 | TTCCAGCTTGAGATGGGTATATATCTCAGCTCCCCTAAAACAGATAAGGCCTCAGAAGATGGCGAAAATGAAAAACTTCGATATGGCTTGTCCTCAATGCAAGGGTGGCGAGCAACAATGGAAGACGCCCATGCAGCCTATCCAAACTTGGACACTCATACATCTTTCTTTGGTGTTTATGATGGTCATGGAGGTAAAGCAGTTGCAAAGTTCTGTGCTAAGTATCTTCACCAACAAGTGCTTAAGCATGAATCATACACATCTGGAGACTTGGAAACTTCTGTCCAGAAAGCCTTTCTCAGAATGGATGAAATGATGTGTGGGCAAAAAGGGTGGCGAGAATTGGCCATATTGGGAGACAAAATGGACAAGCTCTCTGGTATGTTGGAAGGATTTATATGGTCTCCAAGGGGCAGTGAAGCTAACAACCATATTGATGATTGGGCTACCGAGGAGGGGCCTCACTCGGATTTCCATGGACCAAATGCTGGATGTACAGCCTGTGTTGCGGTCATTCGGAACAACCAGCTTGTTGTTGCAAATGCTGGTGACTCACGTTGTGTTATATGCAGGAAGGGTCAGGCATTCAATTTGTCTAAAGATCACAAGCCTGATCTTGAGGTGGAGAAAGAAAGGATAATTAATGCTGGAGGCTTCATCCAAGTGGGTCGCGTCAATGGAAGTTTAAATTTGTCCAGAGCTATTGGAGATATGGAATTCAAGCAGAATAAATTTTTACCTGCAGAACAGCAGATAATAACTGCTAATCCCGATCTTAACACTGGTATGCTTTGTGATGAGGACGAGTTTCTTGTTCTAGCTTGTGATGGAATCTGGGATTGCATGTCCAGCCAACAGCTAGTTGACTTCGTACGAGAACAACTAAAAACGGAAACTAAGCTTTCTGAAATCTGTGAAAAAGTATTTGATCGGTGCTTGGCCCCAACGACCGGTGGCGAGGGATGTGACAACATGACTATGATCTTAGTTCAGTTCAAAAAACCTGTAATTACAGATGCTTCCCCTGACGAGAAGCCTTTACCGTCTGATCAAGCCTCTGATTCAAAGAAGAGCTCGGAAGACGCCGAATAG | 1092 | 44.23 | FQLEMGIYLSSPKTDKASEDGENEKLRYGLSSMQGWRATMEDAHAAYPNLDTHTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHESYTSGDLETSVQKAFLRMDEMMCGQKGWRELAILGDKMDKLSGMLEGFIWSPRGSEANNHIDDWATEEGPHSDFHGPNAGCTACVAVIRNNQLVVANAGDSRCVICRKGQAFNLSKDHKPDLEVEKERIINAGGFIQVGRVNGSLNLSRAIGDMEFKQNKFLPAEQQIITANPDLNTGMLCDEDEFLVLACDGIWDCMSSQQLVDFVREQLKTETKLSEICEKVFDRCLAPTTGGEGCDNMTMILVQFKKPVITDASPDEKPLPSDQASDSKKSSEDAE | 363 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 57792619 | 57798606 | + | Bda019783.1 | Bda04g00787 | 5809 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda04g00787 | 363 | ProSiteProfiles | PPM-type phosphatase domain profile. | 27 | 332 | IPR001932 | - | |
Bda04g00787 | 363 | SMART | PP2C_SIG_2 | 32 | 332 | IPR001932 | - | |
Bda04g00787 | 363 | SUPERFAMILY | PP2C-like | 7 | 333 | IPR036457 | - | |
Bda04g00787 | 363 | Pfam | Protein phosphatase 2C | 142 | 317 | IPR001932 | - | |
Bda04g00787 | 363 | Pfam | Protein phosphatase 2C | 27 | 106 | IPR001932 | - | |
Bda04g00787 | 363 | ProSitePatterns | PPM-type phosphatase domain signature. | 56 | 64 | IPR000222 | GO:0043169 | |
Bda04g00787 | 363 | MobiDBLite | consensus disorder prediction | 349 | 363 | - | - | |
Bda04g00787 | 363 | CDD | PP2Cc | 27 | 332 | IPR001932 | - | |
Bda04g00787 | 363 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 3 | 344 | - | - | |
Bda04g00787 | 363 | MobiDBLite | consensus disorder prediction | 339 | 363 | - | - | |
Bda04g00787 | 363 | Gene3D | - | 4 | 333 | IPR036457 | - | |
Bda04g00787 | 363 | SMART | PP2C_4 | 17 | 330 | IPR001932 | - | |
Bda04g00787 | 363 | PANTHER | PROTEIN PHOSPHATASE 2C | 3 | 344 | IPR015655 | GO:0004722|GO:0006470 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00105 | Bda-Chr3:950950 | Bda04g00787 | Bda-Chr4:57792619 | 4.30E-158 | dispersed | |
Bda04g00787 | Bda-Chr4:57792619 | Bda01g00986 | Bda-Chr1:43467643 | 1.64E-44 | dispersed | |
Bda04g00787 | Bda-Chr4:57792619 | Bda01g01016 | Bda-Chr1:43708717 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda04g00787 | K17499 | - | qsu:111986392 | 606.29 |