Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00805 ATGCTCTATCTCTTATGTTTCTGGATTTATCGAAGGAAGAAATCGAAGAATTCTGCTGGAAAGACAGTAAAGAACTCGGAGGCTAAATCCGGGTCGTCGTTGAGTCAAATCATGGCAAGGTTTAATTCATCGAGGTCCACCAGTATGAAAGATTCGATAGGTGTAATCGAATATAATTTGTTAGAAGCTGCAACAAACAACTTTGGAGAGAGTAATTTCATGGGTGAAGATTATTCCACACATGTTTACAAAGCTTGTTTCGACAACAAAATGGCAGCAGCCGTGAAGAGGATAGATAATGTCAGTGAAGACGGCGAAAGAGAATTCGAGAACGAGATAAATTGGCTGAGCAAAATTCGGCATCAGAATATTACTAAACTCTTGGGATACTGTATTCATGGAGAAACGAGAATAATCGTTTGTGAAATGATGCAGAACGGATCTTTAGAAGCTCAACTGCACGGACCCTCTAAAGGATCATCGCTGACTTGGCATCTACGAATCAAGATAGCCATTGATATTGCCAGGGGGTTGGAATATCTACACGAACATTGCAATCCGCCCGTAATCCATAGAGATTTGAAATCGTCGAATATTCTTCTTGATTCTAACTTCAACGCCAAGCTTTCGAATTTTGGTCTTGCGATAGTCTTAGGAGAACAAAATGATGACATTAAACTAACCGGAACCTTGGGTTACGTGGCCCCGGAATATCTTTCTGACGGTAAATTAACTGATAAAAGTGATGTCTACTCCTTTGGCGTTGTTCTTCTAGAGCTTCTAACCGGAAAATGGCCAATAGAGAAGATGGAAACTTCTCGGTCCCAATCGATCGTTACATGGGCGATTCCTCAACTCAGCGATCGATCAAAGCTTCCGACCATTGTTGATCCCGTGATTAAAGACACCATGGATTTAAAGCACTTATACCAAGTTGCTGCTGTTGCGATTTTATGTGTTCAACCAGAGTCGAGCTATCGGCCGTTGATTACAGATGTTCTTCATTCTCTGATCCCGCTTGTTCCCGTTGAGCTCGGAGGATCGCTTAGATTAAACGGGCCGGTTCTTCCGATTGAGATCAAACGATCTGAATGTGTTTGA 1101 41.96 MLYLLCFWIYRRKKSKNSAGKTVKNSEAKSGSSLSQIMARFNSSRSTSMKDSIGVIEYNLLEAATNNFGESNFMGEDYSTHVYKACFDNKMAAAVKRIDNVSEDGEREFENEINWLSKIRHQNITKLLGYCIHGETRIIVCEMMQNGSLEAQLHGPSKGSSLTWHLRIKIAIDIARGLEYLHEHCNPPVIHRDLKSSNILLDSNFNAKLSNFGLAIVLGEQNDDIKLTGTLGYVAPEYLSDGKLTDKSDVYSFGVVLLELLTGKWPIEKMETSRSQSIVTWAIPQLSDRSKLPTIVDPVIKDTMDLKHLYQVAAVAILCVQPESSYRPLITDVLHSLIPLVPVELGGSLRLNGPVLPIEIKRSECV 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 57892437 57894230 - Bda019800.1 Bda04g00805 5827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00805 366 ProSiteProfiles Protein kinase domain profile. 68 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00805 366 Pfam Protein tyrosine and serine/threonine kinase 75 279 IPR001245 GO:0004672|GO:0006468
Bda04g00805 366 SMART serkin_6 68 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00805 366 SUPERFAMILY Protein kinase-like (PK-like) 43 337 IPR011009 -
Bda04g00805 366 PANTHER OS01G0750732 PROTEIN 1 357 - -
Bda04g00805 366 Gene3D Transferase(Phosphotransferase) domain 1 144 342 - -
Bda04g00805 366 PANTHER BNAC02G46490D PROTEIN 1 357 - -
Bda04g00805 366 Gene3D Phosphorylase Kinase; domain 1 27 143 - -
Bda04g00805 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00084 Bda-Chr3:844291 Bda04g00805 Bda-Chr4:57892437 4.51E-124 dispersed
Bda04g00805 Bda-Chr4:57892437 Bda08g01055 Bda-Chr8:22669505 1.98E-80 dispersed
Bda04g00805 Bda-Chr4:57892437 Bda01g00757 Bda-Chr1:34821946 1.82E-167 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69607 PF07714 PK_Tyr_Ser-Thr 1.00E-44 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00805 - - csv:101211571 551.206