Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda04g00895 | CGGCAATTTTCTTACTCCGAGGTGGTCAACATGACGAATAATTTTGAGAGAACTCTCGGAAGAGGAGGGTTTGGAACAGTTTACCACGGTTACGCCGGTGATACTCCGGTGGCCGTGAAGATACTCTCCACATTGTCGGCAAGAGGATATCAACAGTTCATCACAGAGATCCTAACTTGGGAAGACAGGCTCCGAATAGCCTTGGATTCAGCTCAAGGGTTGGAGTATTTGCACGATGGATGTAAGCCGCCGATCATTCACAGAGACGTGAAGACGACGAACATTCTGTTGGACGAGAAATTCCAGGCCAAAATTGCTGATTTTGGTCTTTCAAAAGATAATCCTGATAACGGCAAAACTCACGCCGCCACCACAGTCGTTGCCGGAACTCCCGGCTACCTCGACCCCGATTACTACCTATCGAACAGATTGACAGAAAAGAGCGATATCTACAGTTTCGGGGTGGTTCTGAACTCTGTCTGGAAATTCGTGGAGTTAGCTATGGACTGTGTTTCTAAGCCGGAAAGAAGACCGCCGATGAGCGTGGTGGTGATTGGAGGCCGTCGGAGGGTTATGTTGACGTCATTTTGCAAGTCTCCTGCGTCGTCTCGTGGGGCCGAGAAGCTGACTTCTTACTCATCTACTGTTGGTAAGTTTAAGGATGTTCCAAAGGATGAGATTAAATCATCAAATTTAGTAATTACAAAACCATTGTCGTCTAATTATAAATGCGATGAGAATGAAGAAACCAAAGTCTCCAAATTGAAAAACCTTCTTTTGGAGAAGTCTAGAGATGGGATATTCTCGTCGGCGCAATTTCAGACTCCGTCGGAGCCACATTTGTCTGGAGCTTGCTTCAAAGATTTGAAGTCCGAGGAGAAAAAGAAACTGACACTGACCAATCAATCTGCAGCCGAAAGATCATCTTCTGTCCCTACTAATAGAAATAAGCCTTTGCTTGATCCATCTTCAAGTTCTTCGAAGTTAAAAAACTCCGAATGGATTAGACGACGTGATGAATCGTCCGGAGGTGAAATTCGAAGCAAGTTTGACGATATCTCAAATAGACTGCATGATGTGAACACTGCACGAGACAATTTGGATTTAAGACCCGAAAAACGGTTGAGACCATGCAAAGATGTCGGAAAATCTTGTTTAATTCCGCCATTGAAAGATAATAAGAGAAATACTCTTAAAAATGGAAGCAATCCTGAAGAAGACAATCCAAAACATTCTGTTACCTCCACATTGAATTCTGCTTCAGCTAATGTTATTTCCCCTGATGATGTTGTTGAAGTTATTGGTGAGAAGCAGTTCTGGGATGCCAGGAAAGCAATTATCAACCAACAAAGAATCTTTGCTGTGCAAGTCTTCGAATTGCACAGAGTGATAAAGGTTCAAAGACTGATTGCTGAATCGCCTAATTTATTGCTCGAAGATGATCTTTATTCGAAAAAAGCAGTCCCAACCGAGCATGCTCTGGAGCCGTCCCCATTGAGTTCTACACATAAATTTCACAGCCGAAACCCAATTTCTCCGCCTTCGTGTAAGAACGATGCCTTCAAAGGTCTTGTGATTAAGCAACCGGTTAATGATCTTCCTTCGAAAAACATCCCACAAGCTTCAACGGCGACAAGTGCTAAACCAGAGCCATGGTGTTTCAACCCATTACCAGCCAGTCAGTGGCTAGTTCCTGTGATGTCCCCTTCTGAAGGGCTCATTTACAAACCAGTTGCAGGGCTATGCCCTCCAAATGCAGGCTTCATTCTCCCCGATGATGAAGCAGATGAATCAGTGAATATACCAGTTCAGCTGGGTTTGATTTTCTCGCATACAGAGAAATATCCTGATGAACCTCCACTTTTAAATGTGAAAAGTTTAAGAGGAATACAACCAGCTGATCTGAAGATTTTGAAAGAAAAGCTTAAAAAAGAGGCATCTGAGAATCTTGGTATGGCTATGATTTATACACTTGTCACATCAGTTCAAGATTGGCTTTCTGACAAGTTTAGTCAAGATACCAGCTTTGAGAATTCTGACGCAACTGCCGAAAAGGATGAGGTAATTATACCGCACGGAGAGCCAGTTACTGTCGATTCATTTTCTGCTTGGCGAGAGAGATTTGAAGCAGAAATTGCGTTGGAACGAGCCAAGTTAATGCCGGACTCTGCTCTTACAGCTCCTAAGGAAAAGAGGCTCTCCGGTAGACAATATTTTGAGAGTGGAAGAGCTTCTTTGAAAGGTGCAGCTGCCGTTGTTGGAGAGTCGGAAGAGGAGGATGACGACGAAGACATTGACTTCGACGACGACGATTTCGAAGGTTCTCTCTCTCTCTCTCTCTTTCTTTCTTGTATCTTTTTTCTTTCAACGAGTAAGATGGGTTTCTTCCTCCACTGTAGAAAGGTGCAGCTGCCGTTGTTGGAGAGTCGGAAGAGGAGGATGACGACGAAGACATTGACTTCGACGACGACGATTTCGAAGGTTCTCTCTCTCTCTCTCTCTTTCTTTCTTGTATCTTTTTTCTTTCAACGAAAAGGTGCAGCTGCCGTTGTTGGAGAGTCGGAAGAGGAGGATGACGACGAAGACATTGACTTCGACGACGACGATTTCGAAGGTTCTCTCTCTCTCTCAATCTTTTAA | 2640 | 43.98 | RQFSYSEVVNMTNNFERTLGRGGFGTVYHGYAGDTPVAVKILSTLSARGYQQFITEILTWEDRLRIALDSAQGLEYLHDGCKPPIIHRDVKTTNILLDEKFQAKIADFGLSKDNPDNGKTHAATTVVAGTPGYLDPDYYLSNRLTEKSDIYSFGVVLNSVWKFVELAMDCVSKPERRPPMSVVVIGGRRRVMLTSFCKSPASSRGAEKLTSYSSTVGKFKDVPKDEIKSSNLVITKPLSSNYKCDENEETKVSKLKNLLLEKSRDGIFSSAQFQTPSEPHLSGACFKDLKSEEKKKLTLTNQSAAERSSSVPTNRNKPLLDPSSSSSKLKNSEWIRRRDESSGGEIRSKFDDISNRLHDVNTARDNLDLRPEKRLRPCKDVGKSCLIPPLKDNKRNTLKNGSNPEEDNPKHSVTSTLNSASANVISPDDVVEVIGEKQFWDARKAIINQQRIFAVQVFELHRVIKVQRLIAESPNLLLEDDLYSKKAVPTEHALEPSPLSSTHKFHSRNPISPPSCKNDAFKGLVIKQPVNDLPSKNIPQASTATSAKPEPWCFNPLPASQWLVPVMSPSEGLIYKPVAGLCPPNAGFILPDDEADESVNIPVQLGLIFSHTEKYPDEPPLLNVKSLRGIQPADLKILKEKLKKEASENLGMAMIYTLVTSVQDWLSDKFSQDTSFENSDATAEKDEVIIPHGEPVTVDSFSAWRERFEAEIALERAKLMPDSALTAPKEKRLSGRQYFESGRASLKGAAAVVGESEEEDDDEDIDFDDDDFEGSLSLSLFLSCIFFLSTSKMGFFLHCRKVQLPLLESRKRRMTTKTLTSTTTISKVLSLSLSFFLVSFFFQRKGAAAVVGESEEEDDDEDIDFDDDDFEGSLSLSIF | 879 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 58695157 | 58719135 | + | Bda019902.2 | Bda04g00895 | 5917 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda04g00895 | 879 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 85 | 97 | IPR008271 | GO:0004672|GO:0006468 | |
Bda04g00895 | 879 | MobiDBLite | consensus disorder prediction | 297 | 347 | - | - | |
Bda04g00895 | 879 | SUPERFAMILY | UBC-like | 596 | 666 | IPR016135 | - | |
Bda04g00895 | 879 | MobiDBLite | consensus disorder prediction | 493 | 512 | - | - | |
Bda04g00895 | 879 | PANTHER | BNAA05G15340D PROTEIN | 592 | 774 | - | - | |
Bda04g00895 | 879 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 183 | IPR011009 | - | |
Bda04g00895 | 879 | MobiDBLite | consensus disorder prediction | 301 | 330 | - | - | |
Bda04g00895 | 879 | MobiDBLite | consensus disorder prediction | 386 | 417 | - | - | |
Bda04g00895 | 879 | ProSiteProfiles | RWD domain profile. | 559 | 669 | IPR006575 | GO:0005515 | |
Bda04g00895 | 879 | Pfam | Protein kinase domain | 66 | 159 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda04g00895 | 879 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 59 | - | - | |
Bda04g00895 | 879 | MobiDBLite | consensus disorder prediction | 331 | 347 | - | - | |
Bda04g00895 | 879 | PANTHER | RWD DOMAIN-CONTAINING PROTEIN | 592 | 774 | IPR040213 | - | |
Bda04g00895 | 879 | SMART | serkin_6 | 13 | 464 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda04g00895 | 879 | Pfam | RWD domain | 598 | 666 | IPR006575 | GO:0005515 | |
Bda04g00895 | 879 | Gene3D | Transferase(Phosphotransferase) domain 1 | 60 | 184 | - | - | |
Bda04g00895 | 879 | SMART | RWD2001b | 570 | 669 | IPR006575 | GO:0005515 | |
Bda04g00895 | 879 | ProSiteProfiles | Protein kinase domain profile. | 1 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda04g00895 | 879 | ProSitePatterns | Protein kinases ATP-binding region signature. | 19 | 40 | IPR017441 | GO:0005524 | |
Bda04g00895 | 879 | MobiDBLite | consensus disorder prediction | 495 | 512 | - | - | |
Bda04g00895 | 879 | Gene3D | Ubiquitin Conjugating Enzyme | 578 | 676 | IPR016135 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda04g00895 | Bda12g01091 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00895 | Bda-Chr4:58695157 | Bda12g01092 | Bda-Chr12:42670307 | 1.41E-54 | dispersed | |
Bda13g01613 | Bda-Chr13:39629825 | Bda04g00895 | Bda-Chr4:58695157 | 7.32E-28 | dispersed | |
Bda01g00608 | Bda-Chr1:33071316 | Bda04g00895 | Bda-Chr4:58695157 | 3.00E-30 | wgd | |
Bda12g01091 | Bda-Chr12:42635243 | Bda04g00895 | Bda-Chr4:58695157 | 1.08E-51 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69608 | PF05773 | RWD | 4.10E-13 | CL0208 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda04g00895 | - | - | pvy:116115852 | 243.432 |