Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00895 CGGCAATTTTCTTACTCCGAGGTGGTCAACATGACGAATAATTTTGAGAGAACTCTCGGAAGAGGAGGGTTTGGAACAGTTTACCACGGTTACGCCGGTGATACTCCGGTGGCCGTGAAGATACTCTCCACATTGTCGGCAAGAGGATATCAACAGTTCATCACAGAGATCCTAACTTGGGAAGACAGGCTCCGAATAGCCTTGGATTCAGCTCAAGGGTTGGAGTATTTGCACGATGGATGTAAGCCGCCGATCATTCACAGAGACGTGAAGACGACGAACATTCTGTTGGACGAGAAATTCCAGGCCAAAATTGCTGATTTTGGTCTTTCAAAAGATAATCCTGATAACGGCAAAACTCACGCCGCCACCACAGTCGTTGCCGGAACTCCCGGCTACCTCGACCCCGATTACTACCTATCGAACAGATTGACAGAAAAGAGCGATATCTACAGTTTCGGGGTGGTTCTGAACTCTGTCTGGAAATTCGTGGAGTTAGCTATGGACTGTGTTTCTAAGCCGGAAAGAAGACCGCCGATGAGCGTGGTGGTGATTGGAGGCCGTCGGAGGGTTATGTTGACGTCATTTTGCAAGTCTCCTGCGTCGTCTCGTGGGGCCGAGAAGCTGACTTCTTACTCATCTACTGTTGGTAAGTTTAAGGATGTTCCAAAGGATGAGATTAAATCATCAAATTTAGTAATTACAAAACCATTGTCGTCTAATTATAAATGCGATGAGAATGAAGAAACCAAAGTCTCCAAATTGAAAAACCTTCTTTTGGAGAAGTCTAGAGATGGGATATTCTCGTCGGCGCAATTTCAGACTCCGTCGGAGCCACATTTGTCTGGAGCTTGCTTCAAAGATTTGAAGTCCGAGGAGAAAAAGAAACTGACACTGACCAATCAATCTGCAGCCGAAAGATCATCTTCTGTCCCTACTAATAGAAATAAGCCTTTGCTTGATCCATCTTCAAGTTCTTCGAAGTTAAAAAACTCCGAATGGATTAGACGACGTGATGAATCGTCCGGAGGTGAAATTCGAAGCAAGTTTGACGATATCTCAAATAGACTGCATGATGTGAACACTGCACGAGACAATTTGGATTTAAGACCCGAAAAACGGTTGAGACCATGCAAAGATGTCGGAAAATCTTGTTTAATTCCGCCATTGAAAGATAATAAGAGAAATACTCTTAAAAATGGAAGCAATCCTGAAGAAGACAATCCAAAACATTCTGTTACCTCCACATTGAATTCTGCTTCAGCTAATGTTATTTCCCCTGATGATGTTGTTGAAGTTATTGGTGAGAAGCAGTTCTGGGATGCCAGGAAAGCAATTATCAACCAACAAAGAATCTTTGCTGTGCAAGTCTTCGAATTGCACAGAGTGATAAAGGTTCAAAGACTGATTGCTGAATCGCCTAATTTATTGCTCGAAGATGATCTTTATTCGAAAAAAGCAGTCCCAACCGAGCATGCTCTGGAGCCGTCCCCATTGAGTTCTACACATAAATTTCACAGCCGAAACCCAATTTCTCCGCCTTCGTGTAAGAACGATGCCTTCAAAGGTCTTGTGATTAAGCAACCGGTTAATGATCTTCCTTCGAAAAACATCCCACAAGCTTCAACGGCGACAAGTGCTAAACCAGAGCCATGGTGTTTCAACCCATTACCAGCCAGTCAGTGGCTAGTTCCTGTGATGTCCCCTTCTGAAGGGCTCATTTACAAACCAGTTGCAGGGCTATGCCCTCCAAATGCAGGCTTCATTCTCCCCGATGATGAAGCAGATGAATCAGTGAATATACCAGTTCAGCTGGGTTTGATTTTCTCGCATACAGAGAAATATCCTGATGAACCTCCACTTTTAAATGTGAAAAGTTTAAGAGGAATACAACCAGCTGATCTGAAGATTTTGAAAGAAAAGCTTAAAAAAGAGGCATCTGAGAATCTTGGTATGGCTATGATTTATACACTTGTCACATCAGTTCAAGATTGGCTTTCTGACAAGTTTAGTCAAGATACCAGCTTTGAGAATTCTGACGCAACTGCCGAAAAGGATGAGGTAATTATACCGCACGGAGAGCCAGTTACTGTCGATTCATTTTCTGCTTGGCGAGAGAGATTTGAAGCAGAAATTGCGTTGGAACGAGCCAAGTTAATGCCGGACTCTGCTCTTACAGCTCCTAAGGAAAAGAGGCTCTCCGGTAGACAATATTTTGAGAGTGGAAGAGCTTCTTTGAAAGGTGCAGCTGCCGTTGTTGGAGAGTCGGAAGAGGAGGATGACGACGAAGACATTGACTTCGACGACGACGATTTCGAAGGTTCTCTCTCTCTCTCTCTCTTTCTTTCTTGTATCTTTTTTCTTTCAACGAGTAAGATGGGTTTCTTCCTCCACTGTAGAAAGGTGCAGCTGCCGTTGTTGGAGAGTCGGAAGAGGAGGATGACGACGAAGACATTGACTTCGACGACGACGATTTCGAAGGTTCTCTCTCTCTCTCTCTCTTTCTTTCTTGTATCTTTTTTCTTTCAACGAAAAGGTGCAGCTGCCGTTGTTGGAGAGTCGGAAGAGGAGGATGACGACGAAGACATTGACTTCGACGACGACGATTTCGAAGGTTCTCTCTCTCTCTCAATCTTTTAA 2640 43.98 RQFSYSEVVNMTNNFERTLGRGGFGTVYHGYAGDTPVAVKILSTLSARGYQQFITEILTWEDRLRIALDSAQGLEYLHDGCKPPIIHRDVKTTNILLDEKFQAKIADFGLSKDNPDNGKTHAATTVVAGTPGYLDPDYYLSNRLTEKSDIYSFGVVLNSVWKFVELAMDCVSKPERRPPMSVVVIGGRRRVMLTSFCKSPASSRGAEKLTSYSSTVGKFKDVPKDEIKSSNLVITKPLSSNYKCDENEETKVSKLKNLLLEKSRDGIFSSAQFQTPSEPHLSGACFKDLKSEEKKKLTLTNQSAAERSSSVPTNRNKPLLDPSSSSSKLKNSEWIRRRDESSGGEIRSKFDDISNRLHDVNTARDNLDLRPEKRLRPCKDVGKSCLIPPLKDNKRNTLKNGSNPEEDNPKHSVTSTLNSASANVISPDDVVEVIGEKQFWDARKAIINQQRIFAVQVFELHRVIKVQRLIAESPNLLLEDDLYSKKAVPTEHALEPSPLSSTHKFHSRNPISPPSCKNDAFKGLVIKQPVNDLPSKNIPQASTATSAKPEPWCFNPLPASQWLVPVMSPSEGLIYKPVAGLCPPNAGFILPDDEADESVNIPVQLGLIFSHTEKYPDEPPLLNVKSLRGIQPADLKILKEKLKKEASENLGMAMIYTLVTSVQDWLSDKFSQDTSFENSDATAEKDEVIIPHGEPVTVDSFSAWRERFEAEIALERAKLMPDSALTAPKEKRLSGRQYFESGRASLKGAAAVVGESEEEDDDEDIDFDDDDFEGSLSLSLFLSCIFFLSTSKMGFFLHCRKVQLPLLESRKRRMTTKTLTSTTTISKVLSLSLSFFLVSFFFQRKGAAAVVGESEEEDDDEDIDFDDDDFEGSLSLSIF 879
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 58695157 58719135 + Bda019902.2 Bda04g00895 5917
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00895 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 85 97 IPR008271 GO:0004672|GO:0006468
Bda04g00895 879 MobiDBLite consensus disorder prediction 297 347 - -
Bda04g00895 879 SUPERFAMILY UBC-like 596 666 IPR016135 -
Bda04g00895 879 MobiDBLite consensus disorder prediction 493 512 - -
Bda04g00895 879 PANTHER BNAA05G15340D PROTEIN 592 774 - -
Bda04g00895 879 SUPERFAMILY Protein kinase-like (PK-like) 2 183 IPR011009 -
Bda04g00895 879 MobiDBLite consensus disorder prediction 301 330 - -
Bda04g00895 879 MobiDBLite consensus disorder prediction 386 417 - -
Bda04g00895 879 ProSiteProfiles RWD domain profile. 559 669 IPR006575 GO:0005515
Bda04g00895 879 Pfam Protein kinase domain 66 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00895 879 Gene3D Phosphorylase Kinase; domain 1 1 59 - -
Bda04g00895 879 MobiDBLite consensus disorder prediction 331 347 - -
Bda04g00895 879 PANTHER RWD DOMAIN-CONTAINING PROTEIN 592 774 IPR040213 -
Bda04g00895 879 SMART serkin_6 13 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00895 879 Pfam RWD domain 598 666 IPR006575 GO:0005515
Bda04g00895 879 Gene3D Transferase(Phosphotransferase) domain 1 60 184 - -
Bda04g00895 879 SMART RWD2001b 570 669 IPR006575 GO:0005515
Bda04g00895 879 ProSiteProfiles Protein kinase domain profile. 1 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda04g00895 879 ProSitePatterns Protein kinases ATP-binding region signature. 19 40 IPR017441 GO:0005524
Bda04g00895 879 MobiDBLite consensus disorder prediction 495 512 - -
Bda04g00895 879 Gene3D Ubiquitin Conjugating Enzyme 578 676 IPR016135 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bda04g00895 Bda12g01091 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00895 Bda-Chr4:58695157 Bda12g01092 Bda-Chr12:42670307 1.41E-54 dispersed
Bda13g01613 Bda-Chr13:39629825 Bda04g00895 Bda-Chr4:58695157 7.32E-28 dispersed
Bda01g00608 Bda-Chr1:33071316 Bda04g00895 Bda-Chr4:58695157 3.00E-30 wgd
Bda12g01091 Bda-Chr12:42635243 Bda04g00895 Bda-Chr4:58695157 1.08E-51 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69608 PF05773 RWD 4.10E-13 CL0208 Bda PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00895 - - pvy:116115852 243.432