Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda04g00907 | ATGGACAGTTTGTGGAGTACAGTGGTAGTAACAGCAGTTTTCTCGACCGCCATAATTCTCTACAGAAACAGCTTTTTTAGACTGAGATCAAAGCACAGAAGTCTCCTTCCTTCTGGCTCTCTCGGATGGCCATTTCTTGGCGAAACCCTTCCCTTCATTTCCTGCGCTTATTCCGACCGCCCTGAAACTTTCATGAATAAGCGTCGTAGAATGTATGGAAAAGTGTTTAAGTCGCATATATTTGGGAGTTCAACCATTGTTTCGACAGACGCAGAAGTGAGTAGGTTTATTCTGCAGAGTGATGCCAAGGTTTTTGTGCCATCTTATCCGAAATCGTTGACGGAATTGATGGGGAAGTCTTCCATTTTGCTGTTAAATGGGAGTCTGCAAAAGAGAATCCATGGTTTAGTTGGAGCTTTCTTCAAGTCTCATCATCTCAAAGCTCAAGTAACTAAAGATATGCAGAAATATGTCCAAGAATCCATGGCCAACTGGTCAGAACTCCGTCCTGTTTACCTGCAAGACGAAACCAAAAATATTTCCTTTCAAGTTCTGGTGAAGACGTTAATCAACTTAGATCCCGGAGAAGACATGGAATTCCTCAAGAAACTCTTCCAAGAATTCATCGCCGGCCTCATGGCTTTCCCCGTAAACATCCCCGGAAGTCAATTACATCGATCGATACAGGCACTTTTTTTTGACGAAAACATGAAGCTGAAAAGACAAAAAGCGCAACTTGGAGAGCCATTGCACTGGTGTGACTACTTTTCCTTGTCATTTACACAAACTGTAATCACAGAAACATTGAGAATGGGAAACATTATAGTAGGGGTTATGAGGAAGGCAGTGAGAGATGTAGAGATTAAAGGGTACTTGATACCAAAAGGATGGAGTGTTCTTGCATATTTTAGATCAGTTCATCTTGATGAAACCCTCTATGAATGGCCTTATCAGTTCAATCCATGGAGGTGGCAGGAAAAGGACAATAGCAGTTGTAATTTTACCCCCTTTGGAGGTGGACAAAGGCTATGTCCTGGCCTTGACCTAGCCAGGCTGGAAGCTTCCATTTTTCTTCACCACTTTGTCACTGAGTTCAGGTGGGTGGCGGAGGAAGACACGATCACAAACTTTCCTACGGTGAAGATGAAGAAGAGAATGCCAGTTTGGGTGAAGAGAAGGGAAGACTGTCACTAA | 1194 | 43.13 | MDSLWSTVVVTAVFSTAIILYRNSFFRLRSKHRSLLPSGSLGWPFLGETLPFISCAYSDRPETFMNKRRRMYGKVFKSHIFGSSTIVSTDAEVSRFILQSDAKVFVPSYPKSLTELMGKSSILLLNGSLQKRIHGLVGAFFKSHHLKAQVTKDMQKYVQESMANWSELRPVYLQDETKNISFQVLVKTLINLDPGEDMEFLKKLFQEFIAGLMAFPVNIPGSQLHRSIQALFFDENMKLKRQKAQLGEPLHWCDYFSLSFTQTVITETLRMGNIIVGVMRKAVRDVEIKGYLIPKGWSVLAYFRSVHLDETLYEWPYQFNPWRWQEKDNSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTEFRWVAEEDTITNFPTVKMKKRMPVWVKRREDCH | 397 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 58847391 | 58851436 | - | Bda019914.1 | Bda04g00907 | 5929 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda04g00907 | 397 | Gene3D | Cytochrome P450 | 242 | 393 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00907 | 397 | Pfam | Cytochrome P450 | 37 | 166 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00907 | 397 | Pfam | Cytochrome P450 | 249 | 373 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00907 | 397 | PANTHER | 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 | 231 | 388 | - | - | |
Bda04g00907 | 397 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 337 | 346 | IPR017972 | GO:0005506|GO:0016705 | |
Bda04g00907 | 397 | Gene3D | Cytochrome P450 | 27 | 241 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00907 | 397 | PANTHER | 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 | 15 | 229 | - | - | |
Bda04g00907 | 397 | SUPERFAMILY | Cytochrome P450 | 29 | 393 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00907 | 397 | PANTHER | CYTOCHROME P450 26 | 15 | 229 | - | - | |
Bda04g00907 | 397 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00907 | 397 | PRINTS | E-class P450 group I signature | 334 | 344 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00907 | 397 | PRINTS | E-class P450 group I signature | 262 | 280 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00907 | 397 | PRINTS | E-class P450 group I signature | 302 | 326 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00907 | 397 | PRINTS | E-class P450 group I signature | 344 | 367 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00907 | 397 | PANTHER | CYTOCHROME P450 26 | 231 | 388 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00907 | Bda-Chr4:58847391 | Bda14g00258 | Bda-Chr14:1790676 | 6.06E-44 | dispersed | |
Bda04g00907 | Bda-Chr4:58847391 | Bda09g00471 | Bda-Chr9:6155320 | 5.29E-48 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda04g00907 | K12638 | - | pop:112326932 | 611.683 |