Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00907 ATGGACAGTTTGTGGAGTACAGTGGTAGTAACAGCAGTTTTCTCGACCGCCATAATTCTCTACAGAAACAGCTTTTTTAGACTGAGATCAAAGCACAGAAGTCTCCTTCCTTCTGGCTCTCTCGGATGGCCATTTCTTGGCGAAACCCTTCCCTTCATTTCCTGCGCTTATTCCGACCGCCCTGAAACTTTCATGAATAAGCGTCGTAGAATGTATGGAAAAGTGTTTAAGTCGCATATATTTGGGAGTTCAACCATTGTTTCGACAGACGCAGAAGTGAGTAGGTTTATTCTGCAGAGTGATGCCAAGGTTTTTGTGCCATCTTATCCGAAATCGTTGACGGAATTGATGGGGAAGTCTTCCATTTTGCTGTTAAATGGGAGTCTGCAAAAGAGAATCCATGGTTTAGTTGGAGCTTTCTTCAAGTCTCATCATCTCAAAGCTCAAGTAACTAAAGATATGCAGAAATATGTCCAAGAATCCATGGCCAACTGGTCAGAACTCCGTCCTGTTTACCTGCAAGACGAAACCAAAAATATTTCCTTTCAAGTTCTGGTGAAGACGTTAATCAACTTAGATCCCGGAGAAGACATGGAATTCCTCAAGAAACTCTTCCAAGAATTCATCGCCGGCCTCATGGCTTTCCCCGTAAACATCCCCGGAAGTCAATTACATCGATCGATACAGGCACTTTTTTTTGACGAAAACATGAAGCTGAAAAGACAAAAAGCGCAACTTGGAGAGCCATTGCACTGGTGTGACTACTTTTCCTTGTCATTTACACAAACTGTAATCACAGAAACATTGAGAATGGGAAACATTATAGTAGGGGTTATGAGGAAGGCAGTGAGAGATGTAGAGATTAAAGGGTACTTGATACCAAAAGGATGGAGTGTTCTTGCATATTTTAGATCAGTTCATCTTGATGAAACCCTCTATGAATGGCCTTATCAGTTCAATCCATGGAGGTGGCAGGAAAAGGACAATAGCAGTTGTAATTTTACCCCCTTTGGAGGTGGACAAAGGCTATGTCCTGGCCTTGACCTAGCCAGGCTGGAAGCTTCCATTTTTCTTCACCACTTTGTCACTGAGTTCAGGTGGGTGGCGGAGGAAGACACGATCACAAACTTTCCTACGGTGAAGATGAAGAAGAGAATGCCAGTTTGGGTGAAGAGAAGGGAAGACTGTCACTAA 1194 43.13 MDSLWSTVVVTAVFSTAIILYRNSFFRLRSKHRSLLPSGSLGWPFLGETLPFISCAYSDRPETFMNKRRRMYGKVFKSHIFGSSTIVSTDAEVSRFILQSDAKVFVPSYPKSLTELMGKSSILLLNGSLQKRIHGLVGAFFKSHHLKAQVTKDMQKYVQESMANWSELRPVYLQDETKNISFQVLVKTLINLDPGEDMEFLKKLFQEFIAGLMAFPVNIPGSQLHRSIQALFFDENMKLKRQKAQLGEPLHWCDYFSLSFTQTVITETLRMGNIIVGVMRKAVRDVEIKGYLIPKGWSVLAYFRSVHLDETLYEWPYQFNPWRWQEKDNSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTEFRWVAEEDTITNFPTVKMKKRMPVWVKRREDCH 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 58847391 58851436 - Bda019914.1 Bda04g00907 5929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00907 397 Gene3D Cytochrome P450 242 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00907 397 Pfam Cytochrome P450 37 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00907 397 Pfam Cytochrome P450 249 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00907 397 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 231 388 - -
Bda04g00907 397 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 337 346 IPR017972 GO:0005506|GO:0016705
Bda04g00907 397 Gene3D Cytochrome P450 27 241 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00907 397 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 15 229 - -
Bda04g00907 397 SUPERFAMILY Cytochrome P450 29 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00907 397 PANTHER CYTOCHROME P450 26 15 229 - -
Bda04g00907 397 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00907 397 PRINTS E-class P450 group I signature 334 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00907 397 PRINTS E-class P450 group I signature 262 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00907 397 PRINTS E-class P450 group I signature 302 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00907 397 PRINTS E-class P450 group I signature 344 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00907 397 PANTHER CYTOCHROME P450 26 231 388 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00907 Bda-Chr4:58847391 Bda14g00258 Bda-Chr14:1790676 6.06E-44 dispersed
Bda04g00907 Bda-Chr4:58847391 Bda09g00471 Bda-Chr9:6155320 5.29E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00907 K12638 - pop:112326932 611.683