Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda04g00930 | ATGATGAAAAATGGGTGTCCTTTCACTTCAGCTCAATGGCAAGAGCTTCAGCACCAATCGTTGATCTTCAAATACATGGTGACTGGATCTCCGATTCCCACCGATCTCATTTCTTCACTCAGAAGAAGCTTCGACTCCTCAGTTTCTTCCAAACTTTTCCCTCGCCACCCCATTGGGTGGGGATGTTATGAGATGGGTTGTGGTAGGAAAGCAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGGAAGAAATGGAGGTGCTCAAAAGAAGCATACCCAGATTCAAAGTACTGTGAAAGGCATATGCATCGAGGCAGGAATCGTTCAAGAAAGCCTGTGGAAGCTTCTTCGACTTCATCATCTCCTTCTCCACCCATTTCATCAGCAAACAACATCTCCATTTTCAATCCCACAACCTATTCTTCCTCTCTCTCTTTGTCTCCATCTCTCCCCTCTCCACAAACACTCTCATTCCACAGCCATTGTCGTGATTCAGCTCTTCATCACTTGCTTCATCCTCTTTCTCCTCCTCCTAATCCCCCTCTTACTGCATTTTCATCTCACAGCTCCACTCAAAACTTTTTGCGTTCGGGATTGAGCAGAGATCACAGGCAAGTGGGTTTTGGCAGGTATGATCATGGAACAAGGGATGGCCGAGATGAACAAGCTTTTTTCCCAGAAACTTCAGGTGTGGGAGGGAACTTAGCAGAGCCATATCCGCCATTAACCATGAACTCTTGCCATCAATCACTTCAAAACCTTGATCAGAATAATACCAAAGAGCAGAGACAACAAGAGCAGCATTGCTTCATTTTAGGAACAGATTGTCAATCACCGAAACAAGTTAAACCAGACAAGGAAACGGAAACCCATAAGCCACTTCACCATTTCTTTCATGACTGGCCAATAAAGAAGACAGAATCATGGCTTGATCTTGCCTTCAATTCAAGTAAGCAAAAGCTATGGCTTCTCTTTTACTTCTAG | 987 | 44.78 | MMKNGCPFTSAQWQELQHQSLIFKYMVTGSPIPTDLISSLRRSFDSSVSSKLFPRHPIGWGCYEMGCGRKADPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEASSTSSSPSPPISSANNISIFNPTTYSSSLSLSPSLPSPQTLSFHSHCRDSALHHLLHPLSPPPNPPLTAFSSHSSTQNFLRSGLSRDHRQVGFGRYDHGTRDGRDEQAFFPETSGVGGNLAEPYPPLTMNSCHQSLQNLDQNNTKEQRQQEQHCFILGTDCQSPKQVKPDKETETHKPLHHFFHDWPIKKTESWLDLAFNSSKQKLWLLFYF | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 59084763 | 59085895 | - | Bda019937.1 | Bda04g00930 | 5952 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda04g00930 | 328 | MobiDBLite | consensus disorder prediction | 185 | 200 | - | - | |
Bda04g00930 | 328 | MobiDBLite | consensus disorder prediction | 170 | 219 | - | - | |
Bda04g00930 | 328 | MobiDBLite | consensus disorder prediction | 113 | 131 | - | - | |
Bda04g00930 | 328 | Pfam | WRC | 73 | 115 | IPR014977 | - | |
Bda04g00930 | 328 | SMART | QLQ_2 | 6 | 42 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Bda04g00930 | 328 | MobiDBLite | consensus disorder prediction | 204 | 219 | - | - | |
Bda04g00930 | 328 | ProSiteProfiles | QLQ domain profile. | 7 | 42 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Bda04g00930 | 328 | PANTHER | GROWTH-REGULATING FACTOR 5 | 3 | 321 | - | - | |
Bda04g00930 | 328 | PANTHER | - | 3 | 321 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 | |
Bda04g00930 | 328 | Pfam | QLQ | 7 | 39 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Bda04g00930 | 328 | ProSiteProfiles | WRC domain profile. | 72 | 116 | IPR014977 | - | |
Bda04g00930 | 328 | MobiDBLite | consensus disorder prediction | 99 | 131 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00930 | Bda-Chr4:59084763 | Bda11g01020 | Bda-Chr11:9965409 | 5.97E-54 | dispersed | |
Bda02g00370 | Bda-Chr2:44103075 | Bda04g00930 | Bda-Chr4:59084763 | 4.66E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15848 | PF08879 | WRC | 1.70E-21 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda04g00930 | - | - | qlo:115988876 | 320.472 |