Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00930 ATGATGAAAAATGGGTGTCCTTTCACTTCAGCTCAATGGCAAGAGCTTCAGCACCAATCGTTGATCTTCAAATACATGGTGACTGGATCTCCGATTCCCACCGATCTCATTTCTTCACTCAGAAGAAGCTTCGACTCCTCAGTTTCTTCCAAACTTTTCCCTCGCCACCCCATTGGGTGGGGATGTTATGAGATGGGTTGTGGTAGGAAAGCAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGGAAGAAATGGAGGTGCTCAAAAGAAGCATACCCAGATTCAAAGTACTGTGAAAGGCATATGCATCGAGGCAGGAATCGTTCAAGAAAGCCTGTGGAAGCTTCTTCGACTTCATCATCTCCTTCTCCACCCATTTCATCAGCAAACAACATCTCCATTTTCAATCCCACAACCTATTCTTCCTCTCTCTCTTTGTCTCCATCTCTCCCCTCTCCACAAACACTCTCATTCCACAGCCATTGTCGTGATTCAGCTCTTCATCACTTGCTTCATCCTCTTTCTCCTCCTCCTAATCCCCCTCTTACTGCATTTTCATCTCACAGCTCCACTCAAAACTTTTTGCGTTCGGGATTGAGCAGAGATCACAGGCAAGTGGGTTTTGGCAGGTATGATCATGGAACAAGGGATGGCCGAGATGAACAAGCTTTTTTCCCAGAAACTTCAGGTGTGGGAGGGAACTTAGCAGAGCCATATCCGCCATTAACCATGAACTCTTGCCATCAATCACTTCAAAACCTTGATCAGAATAATACCAAAGAGCAGAGACAACAAGAGCAGCATTGCTTCATTTTAGGAACAGATTGTCAATCACCGAAACAAGTTAAACCAGACAAGGAAACGGAAACCCATAAGCCACTTCACCATTTCTTTCATGACTGGCCAATAAAGAAGACAGAATCATGGCTTGATCTTGCCTTCAATTCAAGTAAGCAAAAGCTATGGCTTCTCTTTTACTTCTAG 987 44.78 MMKNGCPFTSAQWQELQHQSLIFKYMVTGSPIPTDLISSLRRSFDSSVSSKLFPRHPIGWGCYEMGCGRKADPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEASSTSSSPSPPISSANNISIFNPTTYSSSLSLSPSLPSPQTLSFHSHCRDSALHHLLHPLSPPPNPPLTAFSSHSSTQNFLRSGLSRDHRQVGFGRYDHGTRDGRDEQAFFPETSGVGGNLAEPYPPLTMNSCHQSLQNLDQNNTKEQRQQEQHCFILGTDCQSPKQVKPDKETETHKPLHHFFHDWPIKKTESWLDLAFNSSKQKLWLLFYF 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 59084763 59085895 - Bda019937.1 Bda04g00930 5952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00930 328 MobiDBLite consensus disorder prediction 185 200 - -
Bda04g00930 328 MobiDBLite consensus disorder prediction 170 219 - -
Bda04g00930 328 MobiDBLite consensus disorder prediction 113 131 - -
Bda04g00930 328 Pfam WRC 73 115 IPR014977 -
Bda04g00930 328 SMART QLQ_2 6 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bda04g00930 328 MobiDBLite consensus disorder prediction 204 219 - -
Bda04g00930 328 ProSiteProfiles QLQ domain profile. 7 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bda04g00930 328 PANTHER GROWTH-REGULATING FACTOR 5 3 321 - -
Bda04g00930 328 PANTHER - 3 321 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bda04g00930 328 Pfam QLQ 7 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bda04g00930 328 ProSiteProfiles WRC domain profile. 72 116 IPR014977 -
Bda04g00930 328 MobiDBLite consensus disorder prediction 99 131 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00930 Bda-Chr4:59084763 Bda11g01020 Bda-Chr11:9965409 5.97E-54 dispersed
Bda02g00370 Bda-Chr2:44103075 Bda04g00930 Bda-Chr4:59084763 4.66E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15848 PF08879 WRC 1.70E-21 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00930 - - qlo:115988876 320.472