Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00935 ATGGCGCTGGCGAAAGAAATAATGGGTTCTTCTGTGATCGGGAGGTCTGTGTTTGTTTCTTCTTCAAAAGTTCTGCTGACTCATAGTTTTGATCAGAGTGGGGTGGCTCGGGGGAGAAGAAGAGCGGCGCATTTGAGGAAGTCGTTGACGACTACCCCTGTTGCTGCCATTAGTGAAAAAATGGTGAGGGCTTTTCCGATTTCAGGGAAGCCGGTGAAGTTCAAGGTTAGAGCTGTGGTTACTGTGAGGAACAAGAACAAAGAAGACTTGAAAGAAACGATTATAAAGCATTTAGACGCTTTTACAGACAAGATTGGTAGAAATATTGTTCTTCAGCTCTTCAGCACTGAGATTGATCCTAAAACTGAAGCTCCAAAGAAGAGCAACGAAGCTGTACTGAGAGACTGGTCGAAGAAATCCAGTGTAAAATCGGAGAGGGTAAATTACACAGCAGAATTCGTCGTGGACTCGAATTTCGGCGAGCCTGGCGCCATTACTGTGACCAACAACCACCAACAAGAGTTCTACTTGGAGACGATCACCATTGAAGGTTTTGCAAGTGGCCCAGTCCATTTTCCCTGCAATTCTTGGGTCCAATCCAGAAAAGATCTTCCTGAACGGAGGATTTTCTTCTCCAATAAGCCATATCTCCCCGGCGAGACACCTGCCGGACTTCAAGCACTGAGAGAGAAAGAATTGAGAAACCTGCGGGGAGACGGAAAAGGGGTTCGGAAATTATGCGACCGAGTATACGACTTTGACAAATACAACGACTTGGGAAATCCCGACAAAGGAGTTGACTCTGCACGCCCCGATCTCGGCGGCGAAGAAATTCCATACCCGAGAAGGTGTCGCACCGGAAGAATCCCAACTGACACTGTGATGAGTGCGGAGAGCCGAGTGGAGGAGCCATTGCCGATGTATGTGCCGAGAGACGAGCAATTCGAGGAGTCGAAGAAGGACACATTGGCTATCGGAAGGCTAAAGGCGCTGCTCCACAGCTTCATTCCGGTGATGAAGGCCATCATTTCGACCCAAAACCATGAATTTAACGACTTCTCGGAAGTCGACAGTCTTTTCAGCGAAGGACTCCTCCTCAACCTTGGCTTACAAGATGAGTTCCTACAGAAACTTCCATTGCCTAAAGGTTTTACAAGAATCCAAGAATCCAGCCCGGGACTCATCAAATACGACACTCCTCTAATACTTTCCAAGGATAAATTTGCTTGGCTCAGAGACGATGAGTTTGCCCGCGAAGCCATAGCTGGGATTAACCCAGTTGCCATCGAGAGGCTTGAAGTTTTCCCGCCGACGAGCAAGCTAGACCCTCTGGTTTATGGCCCACTGGAGTCTGCTCTGAAAGAAGAGCACATTGCTGGCCAGCTTAATGGCATGACAGTGCAACAAGCTTTGGATGAAAAGAAGCTCTTTATGATTGATTACCATGATGTTTATCTTCCGTTTCTGGATCGAATAAATTCCCAAGATGGGCGCAAAGCGTATGCGACTAGGACCATTTTGTTCCTGACCCCTGTCGGTACTCTCAAGCCAATCGCCATTGAACTTAGCCTTCCACCGGACGGCCCAAGCTCCCGAACAAAGCGGGTCGTGACACCTCCGGCAGATGCTACAAGCAATTGGATGTGGCAGCTTGCCAAGGCACACGTTGTGTCGAACGATGCAGGGGTCCACCAACTCGTTAACCATTTTTTAAGAACACATGCAGCAGTGGAACCATTCATCTTATCAGCACATAGACAGCTGAGTGCAATGCACCCCATTTTTAAGCTTTTGGACCCGCATATGCGATATACGCTCGAGATCAATGCGTTGGCCCGCCAGGCCCTAATCAACGGCGAGGGCATCATCGAATCTAGCTTCACTCCCGGCCGTTACAGCATGGAGATGAGTGCCGCTGCTTATAAAAGCTTCTGGCGCTTTGACTTGGAAGGCCTCCCCGCAGATCTCATTCGGAGGGGAATGGCCGAACCTGACCCGACAAAGCCTCATGGGATAAAACTTGTAATGGAGGACTACCCATATGCAGCTGACGGGCTCTTGGTCTGGTCTGCAATCGAGAATTGGGTCCGAACCTGCGTGAACCATTACTACCTTGTTTCACTGGGTGATTTGCAGGATCTTATTGCCGGCGGAACAGAGAGTTCGGCAGTGACAGTTGAATGGGCAATCTCCGAGCTTCTTCAAAAGCCGGAAATTTTCAAGGTGGCGACGGAAGAGCTAGACAGAGTAATTGGAAGAGAAAGATGGGTTGATGAGAAAGACATGGGTAATCTACCATACATAAACTCAATCGTCAAAGAGACGATGAGGCTACACCCAGTAGCTCCAATGTTAGTGCCCAGAATGTCGACGAAAGACTGCCAAATTTCCGGTTACGACATTCCTAAGGGAAGCAGAATACTCGTAAACGTCTGGACCATCGGAAGAGACCCAACATTATGGGACAGTCCAGACGAGTTCCGTCCAGAAAGATTCCTCGGGCGGGACATAGATGTAAAAGGCCATAACTTCGAGCTCTTACCGTTCGGAGCAGGGAGGAGGATGTGCCCTGGTTACAGCCTCGGCCTGAAGGTCATCCAATCAAGTTTAGCCAATCTCCTCCATGGATTTACCTGGAAATTGCCTGCAAATATGAAGATACAGGATTTGAACATGGAAGAAATTTTCGGGCTTTCCACTCCCAAAAAAATCCCTCTTGTTACAGTCGCCGAGCCCCGCCTCCCCCTCCATCTCTACAATCTGTGA 2766 48.84 MALAKEIMGSSVIGRSVFVSSSKVLLTHSFDQSGVARGRRRAAHLRKSLTTTPVAAISEKMVRAFPISGKPVKFKVRAVVTVRNKNKEDLKETIIKHLDAFTDKIGRNIVLQLFSTEIDPKTEAPKKSNEAVLRDWSKKSSVKSERVNYTAEFVVDSNFGEPGAITVTNNHQQEFYLETITIEGFASGPVHFPCNSWVQSRKDLPERRIFFSNKPYLPGETPAGLQALREKELRNLRGDGKGVRKLCDRVYDFDKYNDLGNPDKGVDSARPDLGGEEIPYPRRCRTGRIPTDTVMSAESRVEEPLPMYVPRDEQFEESKKDTLAIGRLKALLHSFIPVMKAIISTQNHEFNDFSEVDSLFSEGLLLNLGLQDEFLQKLPLPKGFTRIQESSPGLIKYDTPLILSKDKFAWLRDDEFAREAIAGINPVAIERLEVFPPTSKLDPLVYGPLESALKEEHIAGQLNGMTVQQALDEKKLFMIDYHDVYLPFLDRINSQDGRKAYATRTILFLTPVGTLKPIAIELSLPPDGPSSRTKRVVTPPADATSNWMWQLAKAHVVSNDAGVHQLVNHFLRTHAAVEPFILSAHRQLSAMHPIFKLLDPHMRYTLEINALARQALINGEGIIESSFTPGRYSMEMSAAAYKSFWRFDLEGLPADLIRRGMAEPDPTKPHGIKLVMEDYPYAADGLLVWSAIENWVRTCVNHYYLVSLGDLQDLIAGGTESSAVTVEWAISELLQKPEIFKVATEELDRVIGRERWVDEKDMGNLPYINSIVKETMRLHPVAPMLVPRMSTKDCQISGYDIPKGSRILVNVWTIGRDPTLWDSPDEFRPERFLGRDIDVKGHNFELLPFGAGRRMCPGYSLGLKVIQSSLANLLHGFTWKLPANMKIQDLNMEEIFGLSTPKKIPLVTVAEPRLPLHLYNL 921
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 59107827 59114062 - Bda019942.1 Bda04g00935 5957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00935 921 Pfam Lipoxygenase 224 705 IPR013819 GO:0016702|GO:0046872
Bda04g00935 921 CDD PLAT_LH2 74 213 IPR042057 -
Bda04g00935 921 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 215 704 IPR013819 GO:0016702|GO:0046872
Bda04g00935 921 Pfam Cytochrome P450 713 901 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00935 921 PRINTS Lipoxygenase signature 546 563 IPR013819 GO:0016702|GO:0046872
Bda04g00935 921 PRINTS Lipoxygenase signature 564 581 IPR013819 GO:0016702|GO:0046872
Bda04g00935 921 PRINTS Lipoxygenase signature 584 604 IPR013819 GO:0016702|GO:0046872
Bda04g00935 921 Gene3D - 235 336 - -
Bda04g00935 921 Gene3D Cytochrome P450 710 908 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00935 921 ProSiteProfiles PLAT domain profile. 76 212 IPR001024 GO:0005515
Bda04g00935 921 Gene3D - 561 709 - -
Bda04g00935 921 SUPERFAMILY Cytochrome P450 711 913 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda04g00935 921 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 849 858 IPR017972 GO:0005506|GO:0016705
Bda04g00935 921 Gene3D - 427 560 - -
Bda04g00935 921 ProSitePatterns Lipoxygenases iron-binding region signature 2. 591 601 IPR020834 GO:0016702|GO:0046872
Bda04g00935 921 Pfam PLAT/LH2 domain 132 211 IPR001024 GO:0005515
Bda04g00935 921 Gene3D PLAT/LH2 domain 77 234 - -
Bda04g00935 921 PANTHER LIPOXYGENASE 31 704 IPR000907 GO:0016702|GO:0046872
Bda04g00935 921 SUPERFAMILY Lipoxigenase 217 704 IPR036226 -
Bda04g00935 921 Gene3D - 337 426 IPR027433 -
Bda04g00935 921 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 31 704 - -
Bda04g00935 921 ProSitePatterns Lipoxygenases iron-binding region signature 1. 564 578 IPR020833 GO:0016702|GO:0046872
Bda04g00935 921 SMART LH2_4 74 213 IPR001024 GO:0005515
Bda04g00935 921 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 74 216 IPR036392 GO:0005515
Bda04g00935 921 PRINTS Plant lipoxygenase signature 182 200 IPR001246 GO:0016491
Bda04g00935 921 PRINTS Plant lipoxygenase signature 347 368 IPR001246 GO:0016491
Bda04g00935 921 PRINTS Plant lipoxygenase signature 279 298 IPR001246 GO:0016491
Bda04g00935 921 PRINTS Plant lipoxygenase signature 208 229 IPR001246 GO:0016491
Bda04g00935 921 PRINTS Plant lipoxygenase signature 501 525 IPR001246 GO:0016491
Bda04g00935 921 PRINTS Plant lipoxygenase signature 247 263 IPR001246 GO:0016491
Bda04g00935 921 PRINTS Plant lipoxygenase signature 395 411 IPR001246 GO:0016491
Bda04g00935 921 PRINTS Plant lipoxygenase signature 434 453 IPR001246 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda04g00935 Bda10g00875 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00935 Bda-Chr4:59107827 Bda10g00968 Bda-Chr10:43954062 0 dispersed
Bda07g01265 Bda-Chr7:15506390 Bda04g00935 Bda-Chr4:59107827 7.78E-34 dispersed
Bda10g00875 Bda-Chr10:43238432 Bda04g00935 Bda-Chr4:59107827 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00935 K00454 - jre:109001974 1083.94