Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda04g00935 | ATGGCGCTGGCGAAAGAAATAATGGGTTCTTCTGTGATCGGGAGGTCTGTGTTTGTTTCTTCTTCAAAAGTTCTGCTGACTCATAGTTTTGATCAGAGTGGGGTGGCTCGGGGGAGAAGAAGAGCGGCGCATTTGAGGAAGTCGTTGACGACTACCCCTGTTGCTGCCATTAGTGAAAAAATGGTGAGGGCTTTTCCGATTTCAGGGAAGCCGGTGAAGTTCAAGGTTAGAGCTGTGGTTACTGTGAGGAACAAGAACAAAGAAGACTTGAAAGAAACGATTATAAAGCATTTAGACGCTTTTACAGACAAGATTGGTAGAAATATTGTTCTTCAGCTCTTCAGCACTGAGATTGATCCTAAAACTGAAGCTCCAAAGAAGAGCAACGAAGCTGTACTGAGAGACTGGTCGAAGAAATCCAGTGTAAAATCGGAGAGGGTAAATTACACAGCAGAATTCGTCGTGGACTCGAATTTCGGCGAGCCTGGCGCCATTACTGTGACCAACAACCACCAACAAGAGTTCTACTTGGAGACGATCACCATTGAAGGTTTTGCAAGTGGCCCAGTCCATTTTCCCTGCAATTCTTGGGTCCAATCCAGAAAAGATCTTCCTGAACGGAGGATTTTCTTCTCCAATAAGCCATATCTCCCCGGCGAGACACCTGCCGGACTTCAAGCACTGAGAGAGAAAGAATTGAGAAACCTGCGGGGAGACGGAAAAGGGGTTCGGAAATTATGCGACCGAGTATACGACTTTGACAAATACAACGACTTGGGAAATCCCGACAAAGGAGTTGACTCTGCACGCCCCGATCTCGGCGGCGAAGAAATTCCATACCCGAGAAGGTGTCGCACCGGAAGAATCCCAACTGACACTGTGATGAGTGCGGAGAGCCGAGTGGAGGAGCCATTGCCGATGTATGTGCCGAGAGACGAGCAATTCGAGGAGTCGAAGAAGGACACATTGGCTATCGGAAGGCTAAAGGCGCTGCTCCACAGCTTCATTCCGGTGATGAAGGCCATCATTTCGACCCAAAACCATGAATTTAACGACTTCTCGGAAGTCGACAGTCTTTTCAGCGAAGGACTCCTCCTCAACCTTGGCTTACAAGATGAGTTCCTACAGAAACTTCCATTGCCTAAAGGTTTTACAAGAATCCAAGAATCCAGCCCGGGACTCATCAAATACGACACTCCTCTAATACTTTCCAAGGATAAATTTGCTTGGCTCAGAGACGATGAGTTTGCCCGCGAAGCCATAGCTGGGATTAACCCAGTTGCCATCGAGAGGCTTGAAGTTTTCCCGCCGACGAGCAAGCTAGACCCTCTGGTTTATGGCCCACTGGAGTCTGCTCTGAAAGAAGAGCACATTGCTGGCCAGCTTAATGGCATGACAGTGCAACAAGCTTTGGATGAAAAGAAGCTCTTTATGATTGATTACCATGATGTTTATCTTCCGTTTCTGGATCGAATAAATTCCCAAGATGGGCGCAAAGCGTATGCGACTAGGACCATTTTGTTCCTGACCCCTGTCGGTACTCTCAAGCCAATCGCCATTGAACTTAGCCTTCCACCGGACGGCCCAAGCTCCCGAACAAAGCGGGTCGTGACACCTCCGGCAGATGCTACAAGCAATTGGATGTGGCAGCTTGCCAAGGCACACGTTGTGTCGAACGATGCAGGGGTCCACCAACTCGTTAACCATTTTTTAAGAACACATGCAGCAGTGGAACCATTCATCTTATCAGCACATAGACAGCTGAGTGCAATGCACCCCATTTTTAAGCTTTTGGACCCGCATATGCGATATACGCTCGAGATCAATGCGTTGGCCCGCCAGGCCCTAATCAACGGCGAGGGCATCATCGAATCTAGCTTCACTCCCGGCCGTTACAGCATGGAGATGAGTGCCGCTGCTTATAAAAGCTTCTGGCGCTTTGACTTGGAAGGCCTCCCCGCAGATCTCATTCGGAGGGGAATGGCCGAACCTGACCCGACAAAGCCTCATGGGATAAAACTTGTAATGGAGGACTACCCATATGCAGCTGACGGGCTCTTGGTCTGGTCTGCAATCGAGAATTGGGTCCGAACCTGCGTGAACCATTACTACCTTGTTTCACTGGGTGATTTGCAGGATCTTATTGCCGGCGGAACAGAGAGTTCGGCAGTGACAGTTGAATGGGCAATCTCCGAGCTTCTTCAAAAGCCGGAAATTTTCAAGGTGGCGACGGAAGAGCTAGACAGAGTAATTGGAAGAGAAAGATGGGTTGATGAGAAAGACATGGGTAATCTACCATACATAAACTCAATCGTCAAAGAGACGATGAGGCTACACCCAGTAGCTCCAATGTTAGTGCCCAGAATGTCGACGAAAGACTGCCAAATTTCCGGTTACGACATTCCTAAGGGAAGCAGAATACTCGTAAACGTCTGGACCATCGGAAGAGACCCAACATTATGGGACAGTCCAGACGAGTTCCGTCCAGAAAGATTCCTCGGGCGGGACATAGATGTAAAAGGCCATAACTTCGAGCTCTTACCGTTCGGAGCAGGGAGGAGGATGTGCCCTGGTTACAGCCTCGGCCTGAAGGTCATCCAATCAAGTTTAGCCAATCTCCTCCATGGATTTACCTGGAAATTGCCTGCAAATATGAAGATACAGGATTTGAACATGGAAGAAATTTTCGGGCTTTCCACTCCCAAAAAAATCCCTCTTGTTACAGTCGCCGAGCCCCGCCTCCCCCTCCATCTCTACAATCTGTGA | 2766 | 48.84 | MALAKEIMGSSVIGRSVFVSSSKVLLTHSFDQSGVARGRRRAAHLRKSLTTTPVAAISEKMVRAFPISGKPVKFKVRAVVTVRNKNKEDLKETIIKHLDAFTDKIGRNIVLQLFSTEIDPKTEAPKKSNEAVLRDWSKKSSVKSERVNYTAEFVVDSNFGEPGAITVTNNHQQEFYLETITIEGFASGPVHFPCNSWVQSRKDLPERRIFFSNKPYLPGETPAGLQALREKELRNLRGDGKGVRKLCDRVYDFDKYNDLGNPDKGVDSARPDLGGEEIPYPRRCRTGRIPTDTVMSAESRVEEPLPMYVPRDEQFEESKKDTLAIGRLKALLHSFIPVMKAIISTQNHEFNDFSEVDSLFSEGLLLNLGLQDEFLQKLPLPKGFTRIQESSPGLIKYDTPLILSKDKFAWLRDDEFAREAIAGINPVAIERLEVFPPTSKLDPLVYGPLESALKEEHIAGQLNGMTVQQALDEKKLFMIDYHDVYLPFLDRINSQDGRKAYATRTILFLTPVGTLKPIAIELSLPPDGPSSRTKRVVTPPADATSNWMWQLAKAHVVSNDAGVHQLVNHFLRTHAAVEPFILSAHRQLSAMHPIFKLLDPHMRYTLEINALARQALINGEGIIESSFTPGRYSMEMSAAAYKSFWRFDLEGLPADLIRRGMAEPDPTKPHGIKLVMEDYPYAADGLLVWSAIENWVRTCVNHYYLVSLGDLQDLIAGGTESSAVTVEWAISELLQKPEIFKVATEELDRVIGRERWVDEKDMGNLPYINSIVKETMRLHPVAPMLVPRMSTKDCQISGYDIPKGSRILVNVWTIGRDPTLWDSPDEFRPERFLGRDIDVKGHNFELLPFGAGRRMCPGYSLGLKVIQSSLANLLHGFTWKLPANMKIQDLNMEEIFGLSTPKKIPLVTVAEPRLPLHLYNL | 921 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 59107827 | 59114062 | - | Bda019942.1 | Bda04g00935 | 5957 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda04g00935 | 921 | Pfam | Lipoxygenase | 224 | 705 | IPR013819 | GO:0016702|GO:0046872 | |
Bda04g00935 | 921 | CDD | PLAT_LH2 | 74 | 213 | IPR042057 | - | |
Bda04g00935 | 921 | ProSiteProfiles | Lipoxygenase iron-binding catalytic domain profile. | 215 | 704 | IPR013819 | GO:0016702|GO:0046872 | |
Bda04g00935 | 921 | Pfam | Cytochrome P450 | 713 | 901 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00935 | 921 | PRINTS | Lipoxygenase signature | 546 | 563 | IPR013819 | GO:0016702|GO:0046872 | |
Bda04g00935 | 921 | PRINTS | Lipoxygenase signature | 564 | 581 | IPR013819 | GO:0016702|GO:0046872 | |
Bda04g00935 | 921 | PRINTS | Lipoxygenase signature | 584 | 604 | IPR013819 | GO:0016702|GO:0046872 | |
Bda04g00935 | 921 | Gene3D | - | 235 | 336 | - | - | |
Bda04g00935 | 921 | Gene3D | Cytochrome P450 | 710 | 908 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00935 | 921 | ProSiteProfiles | PLAT domain profile. | 76 | 212 | IPR001024 | GO:0005515 | |
Bda04g00935 | 921 | Gene3D | - | 561 | 709 | - | - | |
Bda04g00935 | 921 | SUPERFAMILY | Cytochrome P450 | 711 | 913 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Bda04g00935 | 921 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 849 | 858 | IPR017972 | GO:0005506|GO:0016705 | |
Bda04g00935 | 921 | Gene3D | - | 427 | 560 | - | - | |
Bda04g00935 | 921 | ProSitePatterns | Lipoxygenases iron-binding region signature 2. | 591 | 601 | IPR020834 | GO:0016702|GO:0046872 | |
Bda04g00935 | 921 | Pfam | PLAT/LH2 domain | 132 | 211 | IPR001024 | GO:0005515 | |
Bda04g00935 | 921 | Gene3D | PLAT/LH2 domain | 77 | 234 | - | - | |
Bda04g00935 | 921 | PANTHER | LIPOXYGENASE | 31 | 704 | IPR000907 | GO:0016702|GO:0046872 | |
Bda04g00935 | 921 | SUPERFAMILY | Lipoxigenase | 217 | 704 | IPR036226 | - | |
Bda04g00935 | 921 | Gene3D | - | 337 | 426 | IPR027433 | - | |
Bda04g00935 | 921 | PANTHER | LIPOXYGENASE 3, CHLOROPLASTIC | 31 | 704 | - | - | |
Bda04g00935 | 921 | ProSitePatterns | Lipoxygenases iron-binding region signature 1. | 564 | 578 | IPR020833 | GO:0016702|GO:0046872 | |
Bda04g00935 | 921 | SMART | LH2_4 | 74 | 213 | IPR001024 | GO:0005515 | |
Bda04g00935 | 921 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 74 | 216 | IPR036392 | GO:0005515 | |
Bda04g00935 | 921 | PRINTS | Plant lipoxygenase signature | 182 | 200 | IPR001246 | GO:0016491 | |
Bda04g00935 | 921 | PRINTS | Plant lipoxygenase signature | 347 | 368 | IPR001246 | GO:0016491 | |
Bda04g00935 | 921 | PRINTS | Plant lipoxygenase signature | 279 | 298 | IPR001246 | GO:0016491 | |
Bda04g00935 | 921 | PRINTS | Plant lipoxygenase signature | 208 | 229 | IPR001246 | GO:0016491 | |
Bda04g00935 | 921 | PRINTS | Plant lipoxygenase signature | 501 | 525 | IPR001246 | GO:0016491 | |
Bda04g00935 | 921 | PRINTS | Plant lipoxygenase signature | 247 | 263 | IPR001246 | GO:0016491 | |
Bda04g00935 | 921 | PRINTS | Plant lipoxygenase signature | 395 | 411 | IPR001246 | GO:0016491 | |
Bda04g00935 | 921 | PRINTS | Plant lipoxygenase signature | 434 | 453 | IPR001246 | GO:0016491 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda04g00935 | Bda10g00875 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda04g00935 | Bda-Chr4:59107827 | Bda10g00968 | Bda-Chr10:43954062 | 0 | dispersed | |
Bda07g01265 | Bda-Chr7:15506390 | Bda04g00935 | Bda-Chr4:59107827 | 7.78E-34 | dispersed | |
Bda10g00875 | Bda-Chr10:43238432 | Bda04g00935 | Bda-Chr4:59107827 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda04g00935 | K00454 | - | jre:109001974 | 1083.94 |