Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g00950 ATGCCCGACCCCTTCCTAAACCCTAATTCTAACATCTCTGCCTACTACCAGAACAGGGCGGCTCACACCGCTGTTGTCACCAGTGACTGGCTCGCCCAGGCGCAGGCTGCTGTTTCGCCTTACTCTCAGGACCATGCCTCTTCCGATCCTCTTGTTACGCCACCCAGTTCCGGGAATACCTTCAGCGTGATTGATGAGTTCAACAACTGGAGGAGACAGCCTGATTTGGCTGAGGCCGTCGCCGCTTTCCGGGCATTAGCAGCTGTTATTCGCACCAGTGATGCCACTACGATGATGGAGCTTGAAATTGAGCTCAAGAAAGCCTCAGATTCCCTTAAATCTTGGGACACGACTTCTATCTCTTTAACGGCTGGCTGTGATTTGTTCATACGCTACGTGACTAGAACTTCAGCTTTAGAATATGAAGACTTTAATTCAGCAAAGTCTCACTTAATTGAACGGGCAGAAAAATTTGGGGAGATATCATGTGAGGCACGCAGGACCATTGCAATGCTAAGCCAGGATTTCATTTTCGACGGTTGTACTATTTTGGTGCATGGATTTTCTAGAGTCGTTCTCGAAGTTTTGAAGATGGCAGCACTGAAGAAAAAACTTTTTCGAGTATTTTGCACAGAGGGAAGACCAGACCGATCAGGGTTACGATTAGCTAATGATCTGGTCAAGCTTGATATTCCAGTGAAGCTCCTAATTGATGCAGCCGTAGCATATTCTATGGATGAGGTTGACATGGTTCTCGTTGGGGCTGATGGAGTAGTCGAAAGTGGAGGCATAATAAACATGATGGGGACATATCAAATTGCATTAGTGGCGCACGGCATGAGTAAGCCAGTATATGTTGCTGCTGAGAGCTACAAGTTTGCTCGTCTCTACCCGTTGGATCAAAAAGACATGGCCCCTGCCCTGCGCCCAATCGATTTTGGGGTGCCTATCCCATCAAAAGTCGAGGTTGAAAAGTCTGCTCGGGATTACACTCCGCCCCAATATCTTACTCTGCTCTTTACAGATTTGGGTGTTCTTACTCCATCCGTTGTGAGTGATGAGCTCATCCAGCTATACTTGTAA 1083 47.37 MPDPFLNPNSNISAYYQNRAAHTAVVTSDWLAQAQAAVSPYSQDHASSDPLVTPPSSGNTFSVIDEFNNWRRQPDLAEAVAAFRALAAVIRTSDATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFIRYVTRTSALEYEDFNSAKSHLIERAEKFGEISCEARRTIAMLSQDFIFDGCTILVHGFSRVVLEVLKMAALKKKLFRVFCTEGRPDRSGLRLANDLVKLDIPVKLLIDAAVAYSMDEVDMVLVGADGVVESGGIINMMGTYQIALVAHGMSKPVYVAAESYKFARLYPLDQKDMAPALRPIDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 59204092 59206343 - Bda033608 Bda04g00950 5972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g00950 360 SUPERFAMILY NagB/RpiA/CoA transferase-like 76 359 IPR037171 -
Bda04g00950 360 Pfam Initiation factor 2 subunit family 74 348 IPR000649 GO:0044237
Bda04g00950 360 Coils Coil 98 118 - -
Bda04g00950 360 Gene3D - 164 360 IPR042529 -
Bda04g00950 360 Gene3D - 59 161 IPR042528 -
Bda04g00950 360 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 7 360 - -
Bda04g00950 360 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 7 360 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00950 Bda-Chr4:59204092 Bda06g00494 Bda-Chr6:7025917 1.38E-16 dispersed
Bda04g00950 Bda-Chr4:59204092 Bda01g01886 Bda-Chr1:55032435 1.76E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g00950 K03239 - csv:101211420 600.897