Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda04g01190 ATGTCAAACTTGTCCGCTACCAATGGGTTTATCTTTAATCATACCATGCTTAGAGTAAAAGACCCGCAAGTGTCTTTGGCTTTTTATCAAGATGTATTAGGCATGACGCTACTACAAACCAAACGCTATCCCCAAGCGGAATTTGATTTGTATTTTTTGGCAAAGCTCACCGATGAACAGGTGGCAAATTTGCCGACCGATACCGCCGCGCTAGCAGCATTTACCTTTAGTCAGCCAGGGGTGCTAGAATTGACCCATAATTATGGCACTGAGTCTGATGCAGAGTTTCACTATCACAGTGGCAATAGCGAACCACAAGGATTTGGGCATATTTGTTTTGCCGTGCCAAATCTACAAGAAGCGGTGGCTTGGTTTGAGCAACACCAAGTCACCTTCAAAAAACGCCCTGAAGAAGGTACGATGAAAGATATTGCCTTTATCTTGGATCCAGATGGCTACTGGATAGAAATCGTACAACCAAACTTAATGGGTTAA 495 43.43 MSNLSATNGFIFNHTMLRVKDPQVSLAFYQDVLGMTLLQTKRYPQAEFDLYFLAKLTDEQVANLPTDTAALAAFTFSQPGVLELTHNYGTESDAEFHYHSGNSEPQGFGHICFAVPNLQEAVAWFEQHQVTFKKRPEEGTMKDIAFILDPDGYWIEIVQPNLMG 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62539261 62539755 + Bda020333.1 Bda04g01190 6212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda04g01190 164 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 12 160 IPR029068 -
Bda04g01190 164 CDD GlxI_Zn 12 158 - -
Bda04g01190 164 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 157 IPR004360 -
Bda04g01190 164 ProSitePatterns Glyoxalase I signature 1. 14 35 IPR018146 GO:0004462|GO:0046872
Bda04g01190 164 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 11 160 IPR037523 -
Bda04g01190 164 ProSitePatterns Glyoxalase I signature 2. 101 117 IPR018146 GO:0004462|GO:0046872
Bda04g01190 164 TIGRFAM glyox_I: lactoylglutathione lyase 5 161 IPR004361 GO:0004462|GO:0046872
Bda04g01190 164 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 3 163 - -
Bda04g01190 164 Gene3D - 2 163 IPR029068 -
Bda04g01190 164 PANTHER LACTOYLGLUTATHIONE LYASE 3 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02265 Bda-Chr1:58647384 Bda04g01190 Bda-Chr4:62539261 1.16E-51 dispersed
Bda04g01190 Bda-Chr4:62539261 Bda09g01138 Bda-Chr9:42083382 2.34E-11 dispersed
Bda04g01190 Bda-Chr4:62539261 Bda02g00739 Bda-Chr2:48175526 3.53E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda04g01190 K01759 - nok:FAY22_17605 214.927