Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00029 ATGTTGAGCCATGATGACAAGGATTTACCGACGAAATGTCGTGAGAGGCGGCGCCGACGAATAGAGATGAGGCGTGTGGCGACCACATCAACGGCGAGCTCATCTCATGCTGGGAGTCGAAGCGAGAGGGAAAGTCGTTTAGGGGACCAATCGGGCTCTGAAATCAAGCGTATTCGAGTAGGGAACTCGTCGTCTTCTTCCTCCGGCGACGACGTAGAGGACGATACGGCAGTGAAAGAGATGGTCGATGTAGTCCCGATGGTGGAGCCAGTGTTCGGGACTATGTCTATTTCCGGTAGGTCAAGAGAGATGGAGGACGCGATATCTGTACGGACAGGGCTGTGTCAGTCGGCGATTTGCCGACGGCAACCGATGCATTTCTTCGCAGTGTACGATGGACACGGAGGAGCTCACGTGGCGGAACTTTGTAGGGAAATGATGGAGTCGTTGGTGGAGGAGGAGCTGTTAACGGCTGGAAGTACGCGCTCCGAGAGTGCCAGTGGAGGTGAGGAGGATGAGGAAGAATGGAAGAGGGTGCTGAAGAAGAGCTTCGAGAGGATGGACGAGGTGGCTCAGAGCACGTGCGCCTGTGGGAGCGTTGGGGGGCACTGCGGGTGCCATCCTATGGAGGTCGCTCTCGGTGGGTCCACCGCCGTAGTTGCCATACTTACCCCCAAACACATTGTCGTTGCAAACTGCGGCGACTCACGCGCCGTCCTATGCCGTGGCAAAAGAGCAGTCGCTTTGTCCAATGATCACAAGGTTCTCTCTCCTTCTGCGTTACTTTTTACCCATAAACCAGTAAAAAAGCTACAAACTTTTCAATAA 828 54.59 MLSHDDKDLPTKCRERRRRRIEMRRVATTSTASSSHAGSRSERESRLGDQSGSEIKRIRVGNSSSSSSGDDVEDDTAVKEMVDVVPMVEPVFGTMSISGRSREMEDAISVRTGLCQSAICRRQPMHFFAVYDGHGGAHVAELCREMMESLVEEELLTAGSTRSESASGGEEDEEEWKRVLKKSFERMDEVAQSTCACGSVGGHCGCHPMEVALGGSTAVVAILTPKHIVVANCGDSRAVLCRGKRAVALSNDHKVLSPSALLFTHKPVKKLQTFQ 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2081279 2082212 + Bda020599.2 Bda05g00029 6341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00029 275 ProSiteProfiles PPM-type phosphatase domain profile. 91 275 IPR001932 -
Bda05g00029 275 CDD PP2Cc 91 258 IPR001932 -
Bda05g00029 275 SMART PP2C_4 81 271 IPR001932 -
Bda05g00029 275 MobiDBLite consensus disorder prediction 1 16 - -
Bda05g00029 275 MobiDBLite consensus disorder prediction 1 75 - -
Bda05g00029 275 ProSitePatterns PPM-type phosphatase domain signature. 127 135 IPR000222 GO:0043169
Bda05g00029 275 Gene3D - 86 262 IPR036457 -
Bda05g00029 275 SUPERFAMILY PP2C-like 91 259 IPR036457 -
Bda05g00029 275 MobiDBLite consensus disorder prediction 56 71 - -
Bda05g00029 275 MobiDBLite consensus disorder prediction 39 53 - -
Bda05g00029 275 PANTHER PROTEIN PHOSPHATASE 2C 75-RELATED 34 254 - -
Bda05g00029 275 PANTHER ALPHABET, ISOFORM E-RELATED 34 254 - -
Bda05g00029 275 Pfam Protein phosphatase 2C 93 255 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00029 Bda-Chr5:2081279 Bda14g00146 Bda-Chr14:997516 1.11E-35 dispersed
Bda05g00029 Bda-Chr5:2081279 Bda07g00571 Bda-Chr7:7048753 1.21E-42 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00029 K14497 - zju:107414392 262.692