Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g00060 | ATGCTGAAGCACCTTAGCTTGAGCAACAACTTGTTGACGGGTTCAATCCCTGAAGAAATATGTAATGCAGTGTCTTTAACCGAGATCGATCTTGACAATAATTTTTTGTCGGGTACTATCGAAAATGCTTTCGTGAACTGTAGAAATCTAACTCAGCTGGTTTTGGTGGATAATCAGCTTGTTGGTTCAATCCCAGAGTACCTTTTGCAGCTTCCTTTAATGGTGGTTGATCTTGACTCTAACAATTTCACTGGTTCTTTACCTGTAACTATATGGAGCGCTGTGAACTTAATGGAATTTTCTGCTTCAAATAATCAACTTCGGGGGCCTCTTCCATTAGAGATTGGTAATGCAGCTGCATTGCAAAGACTTGTTCTTTGTAATAACATGTTGACTGGCACCATACCAAAGGAAATTGGAAATCTCTCAGCTCTTTCCGTTCTAAATTTGAATTCAAATCTGCTCAAAGGAACTATTCCACCCGAAGTTGGAGATTGCCTTGCATTAACCACTCTAGACCTTGGAAATAACAGCCTAAATGGATCAATTCCTGAAAAAATTGGGGATCTGGCTCAATTACAATGCTTAGTTCTTTCACACAATGTTTTATCAGGGCCTATTCCTTCTAAGCCTTCTGCTTATTTTCGACAGGTGAATATTCCTGATTTGAGCTTTATTCAGCACCTTGGAGTCTTTGATCTCTCTTATAACAGGTTGTCTGGCTCAATACCAGAGGAACTAGGAAACTGCAAAGTGATAGTGGATCTTTTGATTAACAACAATCAGCTTTCCGGAAAAATTCCGAGCTCGTTGTCTCGGTTGACAAATCTTACAACCTTGGATTTATCTGGGAATATGTTAACTGGTTCAATTCCTCGAGAATTTGGCGACGCTATCAAACTTCAAGGTTTGTATCTGGGAAATAATCAGCTCATTGGAACTATCCCAGAGAGCTTAGGTCAATTAAGCCGCTTGGTGAAGCTGAATTTAACTATGAATAAGCTATCTGGATTAGTTCCTGGAACCCTTGGCAAGCTGAAAGATCTTACCCATTTGGATCTAAGCTCAAATGAATTAAATGGTGAGCTTCCTTCTTCCCTTTCCACCTTGCTGAACCTTGTGGGCCTTTACGTCCAGCAGAACAGACTCTCTGGTCCAGTCGATGAGCTGTTCTTGAATTCAACTTCATGGAGGATCGAAACAATGAATTTGAGCAATAATTTCTTTGAAGGAGTGATCCCGAAATCTTTGAGCTATCTCTCGTACTTGACTTCGTTAGACTTCCATGGAAACTTGTTTACAGGATCAATCCCTGCAGAAATCGGAGACTTGATGCAACTTGAGTATTTCGATGCGTCGAGAAACGAGCTTTCCGGGCAGATCCCCGATAAAATATGCAATCTGATGAACCTTTTTTACCTGAATTTGGCAGAAAATAGATTGGAGGGTCCCATTCCCAGAAATGGTATTTGCCAAAATCTATCAAAGAATGTGCTGGCTGGAAACAAAGACCTCTGTGGTAGAATAATGGGTCTAGATTGTCAGATCAAAAACTTGGAGACATCTGCTTTGGTAAATGCTTGGAAAGTTACTGGAATTGTTGTTGGATGTATGATTCTCATTTTCACTGCAGCTTTTGCAATGAAAAGGTGGGTTAGAAGAAGCAGCAGGCGAACTGAGACAGATGAAATGGAGGAAAGCAAGCTCAATGGCTTCCTAGACCCAAACATTTACTTCTTAAGTAGCAGCCGATCGAAAGAACCTCTGAGCATTAACGTGGCCATGTTTGAGCAGCCTCTTCTGAAACTAACGTTGGTTGATATTCTTCAAGCTACCAACAATTTCTGCAAGACAAACATCATAGGAGATGGAGGATTTGGAACTGTCTATAAGGCCACTCTGCCTAACGGAAAAATAGTCGCTGTGAAGAAGCTAAGTGAGGCTAAGTCGCAGGGCCACCGAGAATTTATGGCTGAAATGGAAACTTTGGGCAAAGTAAAACACCAGAATCTCGTTTCGCTTCTGGGGTATTGCTCACTTGGAGAGGAGAAGGTTCTAGTCTATGAGTATATGGTGAATGGAAGCTTGGATCTATGGTTGAGAAACAGGACCGGAACTCTCAAGAATCTTAGCTGGGAGAGGCGGTTCAACATTGCCTCCGGTTCGGCTCGTGGGTTAGCATTTCTTCACCATGGATTCATTCCCCATATCATTCATAGAGACATTAAGGCAAGTAACATCCTCCTCAACGAAGAATTCGAGCCAAAAGTTGCAGATTTTGGGCTGGCTAGACTGATTAGTGCTTGTGAGACTCATGTCACAACTGACATTGCCGGAACTTTCGGATATATTCCTCCTGAGTATGGCCAGAGTGGTCGGTCCACGACGAAAGGCGATGTCTATAGCTATGGCGTGATTCTGCTTGAATTGGTGACGGGAAAAGAGCCGACAGGACCGGATTTTAAGGAAATTGACGGAGGAAACTTAGTTGGATGGGTGTTCAGAAGATCAAAAAGGGACATGCTGTTGATGTTCTTGATCCAACTGTTTTGA | 2553 | 42.11 | MLKHLSLSNNLLTGSIPEEICNAVSLTEIDLDNNFLSGTIENAFVNCRNLTQLVLVDNQLVGSIPEYLLQLPLMVVDLDSNNFTGSLPVTIWSAVNLMEFSASNNQLRGPLPLEIGNAAALQRLVLCNNMLTGTIPKEIGNLSALSVLNLNSNLLKGTIPPEVGDCLALTTLDLGNNSLNGSIPEKIGDLAQLQCLVLSHNVLSGPIPSKPSAYFRQVNIPDLSFIQHLGVFDLSYNRLSGSIPEELGNCKVIVDLLINNNQLSGKIPSSLSRLTNLTTLDLSGNMLTGSIPREFGDAIKLQGLYLGNNQLIGTIPESLGQLSRLVKLNLTMNKLSGLVPGTLGKLKDLTHLDLSSNELNGELPSSLSTLLNLVGLYVQQNRLSGPVDELFLNSTSWRIETMNLSNNFFEGVIPKSLSYLSYLTSLDFHGNLFTGSIPAEIGDLMQLEYFDASRNELSGQIPDKICNLMNLFYLNLAENRLEGPIPRNGICQNLSKNVLAGNKDLCGRIMGLDCQIKNLETSALVNAWKVTGIVVGCMILIFTAAFAMKRWVRRSSRRTETDEMEESKLNGFLDPNIYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILQATNNFCKTNIIGDGGFGTVYKATLPNGKIVAVKKLSEAKSQGHREFMAEMETLGKVKHQNLVSLLGYCSLGEEKVLVYEYMVNGSLDLWLRNRTGTLKNLSWERRFNIASGSARGLAFLHHGFIPHIIHRDIKASNILLNEEFEPKVADFGLARLISACETHVTTDIAGTFGYIPPEYGQSGRSTTKGDVYSYGVILLELVTGKEPTGPDFKEIDGGNLVGWVFRRSKRDMLLMFLIQLF | 850 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3492559 | 3495111 | + | Bda020649.1 | Bda05g00060 | 6372 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g00060 | 850 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 400 | 837 | - | - | |
Bda05g00060 | 850 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 737 | 749 | IPR008271 | GO:0004672|GO:0006468 | |
Bda05g00060 | 850 | Pfam | Leucine Rich Repeat | 2 | 22 | IPR001611 | GO:0005515 | |
Bda05g00060 | 850 | Pfam | Leucine Rich Repeat | 25 | 47 | IPR001611 | GO:0005515 | |
Bda05g00060 | 850 | Pfam | Protein kinase domain | 618 | 818 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda05g00060 | 850 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 276 | 418 | - | - | |
Bda05g00060 | 850 | Pfam | Leucine rich repeat | 324 | 383 | IPR001611 | GO:0005515 | |
Bda05g00060 | 850 | Pfam | Leucine rich repeat | 256 | 311 | IPR001611 | GO:0005515 | |
Bda05g00060 | 850 | ProSitePatterns | Protein kinases ATP-binding region signature. | 621 | 644 | IPR017441 | GO:0005524 | |
Bda05g00060 | 850 | Gene3D | Phosphorylase Kinase; domain 1 | 578 | 690 | - | - | |
Bda05g00060 | 850 | SMART | LRR_typ_2 | 226 | 250 | IPR003591 | - | |
Bda05g00060 | 850 | SMART | LRR_typ_2 | 420 | 444 | IPR003591 | - | |
Bda05g00060 | 850 | SMART | LRR_typ_2 | 168 | 190 | IPR003591 | - | |
Bda05g00060 | 850 | SMART | LRR_typ_2 | 274 | 297 | IPR003591 | - | |
Bda05g00060 | 850 | SMART | LRR_typ_2 | 1 | 23 | IPR003591 | - | |
Bda05g00060 | 850 | SMART | LRR_typ_2 | 322 | 345 | IPR003591 | - | |
Bda05g00060 | 850 | SMART | LRR_typ_2 | 346 | 370 | IPR003591 | - | |
Bda05g00060 | 850 | SMART | LRR_typ_2 | 142 | 166 | IPR003591 | - | |
Bda05g00060 | 850 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 276 | 418 | - | - | |
Bda05g00060 | 850 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 1 | 297 | - | - | |
Bda05g00060 | 850 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 400 | 837 | - | - | |
Bda05g00060 | 850 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 | 1 | 297 | - | - | |
Bda05g00060 | 850 | PRINTS | Leucine-rich repeat signature | 274 | 287 | - | - | |
Bda05g00060 | 850 | PRINTS | Leucine-rich repeat signature | 169 | 182 | - | - | |
Bda05g00060 | 850 | SUPERFAMILY | L domain-like | 222 | 507 | - | - | |
Bda05g00060 | 850 | SUPERFAMILY | Protein kinase-like (PK-like) | 596 | 820 | IPR011009 | - | |
Bda05g00060 | 850 | SMART | LRR_sd22_2 | 274 | 295 | - | - | |
Bda05g00060 | 850 | SMART | LRR_sd22_2 | 370 | 389 | - | - | |
Bda05g00060 | 850 | SMART | LRR_sd22_2 | 444 | 470 | - | - | |
Bda05g00060 | 850 | SMART | LRR_sd22_2 | 166 | 192 | - | - | |
Bda05g00060 | 850 | SMART | LRR_sd22_2 | 346 | 369 | - | - | |
Bda05g00060 | 850 | SMART | serkin_6 | 615 | 850 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda05g00060 | 850 | Gene3D | Transferase(Phosphotransferase) domain 1 | 691 | 846 | - | - | |
Bda05g00060 | 850 | SUPERFAMILY | L domain-like | 2 | 209 | - | - | |
Bda05g00060 | 850 | ProSiteProfiles | Protein kinase domain profile. | 615 | 850 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda05g00060 | 850 | Gene3D | Ribonuclease Inhibitor | 1 | 215 | IPR032675 | - | |
Bda05g00060 | 850 | Gene3D | Ribonuclease Inhibitor | 216 | 517 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda05g00060 | Bda-Chr5:3492559 | Bda11g00199 | Bda-Chr11:2542397 | 2.32E-33 | dispersed | |
Bda14g01371 | Bda-Chr14:16076482 | Bda05g00060 | Bda-Chr5:3492559 | 1.04E-15 | dispersed | |
Bda14g01586 | Bda-Chr14:34138287 | Bda05g00060 | Bda-Chr5:3492559 | 7.37E-19 | dispersed | |
Bda05g00060 | Bda-Chr5:3492559 | Bda08g00020 | Bda-Chr8:186272 | 3.20E-38 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69614 | PF00069 | Pkinase | 2.70E-44 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g00060 | - | - | csv:101215443 | 1304.66 |