Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00123 ATGGGCTATGGAAAGCTAAAGCTGTCTGACCCAGGAGGGTCGCCCTTTGACCAATCGGAACCTTCCTCCTCACACCCACCTCCCCCACGGAGCACGAGGAAGAAGCTCCTCTTCCTCTCTCTCCTCTCTATGACTCTACTCCTCGCGGCAGTCGTCTCCGCCGTTCTCCTCGTCGGCCTTCGAAATCGGGCTTCGGGTCGATCCGGAACTAATCTCGCCCGCAAACCGACCCAGGCCATTTCGAAGACCTGTAGCCGAACTCGGTTCCCGGCCCTCTGTGTCAACTCGCTCGTCGACTTCCCTGGCTCTCAAGCCGCAACGGAGCACGACCTCGTCCACATTTCATTCAATATGACGCTGCAGCATTTTTCCAGAGCCCTCTATCTTTCCGCCGGAATCTCTAATTTGCCGATGAATCCTCGCGTCCGATCTGCCTACGAATCTTGCCTCGAGCTGCTCGACGATTCGATTGACTCCCTCGCTCGTTCACTGCTCTCCATCGCACCTCCGCCGGATGTTGACACTCAATCCGTTGGTTCCATCCCGGATGTTCTCACCTGGCTCAGCGCCGCACTGACCAACCAAGACACCTGTATGGAAGGATTCGACGATGTGAGTGGAACTGTCAAGGATCAAATGACTGAAAGCCTTCGGGACTTGTCGGAGCTAGTGAGCAACTGTTTGGCCATTTTCTCCGGCACCGATTCCAGCGATTTTTCAGGCGTACCGATTCAGAACCGGCGGCGGCTAATGGAGGCTGCAGACACATTGGACGAAAATGAGGAGAAAACGGTGGATTTTCCGAAATGGATGAGCCGGAAAGAGAGGGAACTACTGAGTGTGGCGGTGTCGGCGATTCAAGCAGATATCGTGGTGTCGAAGGATGGAAACGGAAGTTGCAAGACAATAATGGAGGCGATCAAAAAAGCGCCGGACTACGGCGATCGCCGAACAATAATTTACGTGATGGCAGGAAGGTACGAAGAGGAAAACTTGAAGGTGGGAAGGAAGAAGACGAACCTCATGTTCATCGGGGACGGGAAGGGTAAAACGGTCATATCGGGTGGCAAAAGCGTGTTTGATGAGCTGACGACGTTTCACACGGCCACTTTCGCTGCAACCGGAGCCGGTTTAATTTTACGAGACATTACGTTTGAGAATTGGGCCGGACCGAGCAAGCACCAGGCTGTGGCCCTTCGAATTGGAGCGGACCATGCCGTGGTTTATCGCTGCAACATCATTGGCTACCAAGACACCCTCTATGTGCACTCTAATCGTCAATTCTTCCGAGAGTGCGACATTTACGGTACTGTAGATTTCATTTTCGGCAATGCCGCCGTGGTGTTCCAAAACTGCAGCATTAACGCTCGAAAGCCCATGGATCAACAAAAGAACACCATCACCGCCCAAAACCGAAAAGACCCAAATCAAAACTCGGGAATTTCAATCCACGCTTGCCGGATTATGGCCACGCCTGATCTCGAGTCGTCAAAGAGCAATTTCTCGACGTATCTTGGTCGTCCATGGAAACTATACTCCAGAACAGTGTACATGTTATCGTACATAGGGGATCACGTACATCCGAGAGGATGGCTAGAATGGAATGCGACCTTTGCATTGGACACATTATACTACGGGGAATACATGAATTACGGTCCGGGTGGGGCGGTGGGTCAACGGGTCACTTGGCCGGGCTACCGGGTCATCACGTCGGCCATAGAAGCCAGCAAGTTCACAGTTGCTCAATTCATATATGGATCGTCGTGGTTGCCGAACACCGGAGTGGCGTTCTTGGCCGGATTATCAGACTAA 1812 52.76 MGYGKLKLSDPGGSPFDQSEPSSSHPPPPRSTRKKLLFLSLLSMTLLLAAVVSAVLLVGLRNRASGRSGTNLARKPTQAISKTCSRTRFPALCVNSLVDFPGSQAATEHDLVHISFNMTLQHFSRALYLSAGISNLPMNPRVRSAYESCLELLDDSIDSLARSLLSIAPPPDVDTQSVGSIPDVLTWLSAALTNQDTCMEGFDDVSGTVKDQMTESLRDLSELVSNCLAIFSGTDSSDFSGVPIQNRRRLMEAADTLDENEEKTVDFPKWMSRKERELLSVAVSAIQADIVVSKDGNGSCKTIMEAIKKAPDYGDRRTIIYVMAGRYEEENLKVGRKKTNLMFIGDGKGKTVISGGKSVFDELTTFHTATFAATGAGLILRDITFENWAGPSKHQAVALRIGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCSINARKPMDQQKNTITAQNRKDPNQNSGISIHACRIMATPDLESSKSNFSTYLGRPWKLYSRTVYMLSYIGDHVHPRGWLEWNATFALDTLYYGEYMNYGPGGAVGQRVTWPGYRVITSAIEASKFTVAQFIYGSSWLPNTGVAFLAGLSD 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5965310 5967570 + Bda020742.1 Bda05g00123 6435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00123 603 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 233 IPR035513 -
Bda05g00123 603 PANTHER PECTINESTERASE 28 601 - -
Bda05g00123 603 SUPERFAMILY Pectin lyase-like 283 600 IPR011050 -
Bda05g00123 603 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 78 232 IPR035513 -
Bda05g00123 603 CDD PMEI-like_3 84 232 - -
Bda05g00123 603 Pfam Pectinesterase 289 586 IPR000070 GO:0030599|GO:0042545
Bda05g00123 603 PANTHER PECTINESTERASE 28 601 - -
Bda05g00123 603 Pfam Plant invertase/pectin methylesterase inhibitor 79 230 IPR006501 GO:0004857
Bda05g00123 603 SMART PMEI_2 75 230 IPR006501 GO:0004857
Bda05g00123 603 ProSitePatterns Pectinesterase signature 2. 434 443 IPR033131 -
Bda05g00123 603 MobiDBLite consensus disorder prediction 1 31 - -
Bda05g00123 603 Gene3D - 282 601 IPR012334 -
Bda05g00123 603 TIGRFAM PME_inhib: pectinesterase inhibitor domain 49 232 IPR006501 GO:0004857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00123 Bda15g00760 CCT
Bda05g00123 Bda07g01931 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00123 Bda-Chr5:5965310 Bda10g00629 Bda-Chr10:40316479 9.41E-158 dispersed
Bda05g00123 Bda-Chr5:5965310 Bda07g01931 Bda-Chr7:36823276 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00123 - - zju:107414790 890.182