Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00129 ATGGCTTTGCTAAGCTCTCGATTACAGAGATTTCGGCTCACCAAGATCAACTCGTCGTTTGTTTCTTCGTCTTCCTCAAAGAACACGGGCAGACTTCGGTTCCGTCGCAGAGGGCGATGCTGCTCAGCTATAGCCATAGACGCCCCATCTTCTTTGGCTGATGTCAGTGGGATTAGATGGGGTTCGACTAGCCTGCAAGGTCCACGAGATGAAATGGAGGACGACGTTGTTGTTCGTTCCGATGGACTCAACGGCTTCTTGTTTGCAGCCGTGCTAGATGGTCACGGTGGAATCTCTTCCGTCAAGTTTCTCAGGGATGAATTGTACAAAGAGTGTGTAGCAGCTTTACAAGATGGGCTTGTGTTGAGTGGAGACAACTTCAAAACCATCAAAGAGTCATTAATCAAAGCTTTTGAATATACAGATAAAAAACTGCTAGAATGGCTTGAAACAAAGGGGGAAGAAGATGAATCTGGCTCTACAGCAACTGTTATGCTCGTTGGGACAAATGTTTTGTTCATTTCACATATTGGCGACTCATCTGTGGTTCTATCCCGTTCTGGAGGAGCTCAAGTGTTGACGAATCCTCACCGTCCTTATGGAAGCAACAATGCCTCGTTGCAAGAAATCCGAAGAATTAGAGAAGCAGGTGGATGGATTGTCAACGGGAGGATCTGCGGAGATATTGCTGTATCTCGTGCCTTTGGTGACATAAGATTCAAGACGAAGAAAACTGAGATGCTCAGAAAAGGGGTCAAGGAGCGAAGATGGTCCGAAAAGTTTGTTTCTCGAGTACAGTTCAGTAAAGACTTGATCTCTGCTTCGCCAGATATTTTTCAAGTAGCTCTAGGATCAGATGCAGAGTTTATTTTACTAGCATCTGATGGCTTATGGGACTACATAAACAGCTCAGATGCTGTCAAATTTGTTCGAAACCAGCTTAGACAGCATGGCGATGTTCAGCTAGCTAGTGAAGCTCTTGCCCAGGCAGCTTTGAACTCACGGACGCAAGATAACGTTAGCATTGTGATTGCCGATTTAGGAAGGACCGATTGGAAGAACTTGGCGGTCCAACACCAGAATCCGGCGTATGAATTAGTCCAAGCTGTTGCTACAGTGGGAATAGTAGGGATTGGAATTTGGATTTCATCCCAACTTGCTCTGTAA 1167 45.59 MALLSSRLQRFRLTKINSSFVSSSSSKNTGRLRFRRRGRCCSAIAIDAPSSLADVSGIRWGSTSLQGPRDEMEDDVVVRSDGLNGFLFAAVLDGHGGISSVKFLRDELYKECVAALQDGLVLSGDNFKTIKESLIKAFEYTDKKLLEWLETKGEEDESGSTATVMLVGTNVLFISHIGDSSVVLSRSGGAQVLTNPHRPYGSNNASLQEIRRIREAGGWIVNGRICGDIAVSRAFGDIRFKTKKTEMLRKGVKERRWSEKFVSRVQFSKDLISASPDIFQVALGSDAEFILLASDGLWDYINSSDAVKFVRNQLRQHGDVQLASEALAQAALNSRTQDNVSIVIADLGRTDWKNLAVQHQNPAYELVQAVATVGIVGIGIWISSQLAL 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6002537 6005068 + Bda020747.1 Bda05g00129 6441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00129 388 SUPERFAMILY PP2C-like 56 348 IPR036457 -
Bda05g00129 388 Pfam Protein phosphatase 2C 61 340 IPR001932 -
Bda05g00129 388 PANTHER PROTEIN PHOSPHATASE 2C 8 384 IPR015655 GO:0004722|GO:0006470
Bda05g00129 388 PANTHER PROTEIN PHOSPHATASE 2C 57 8 384 - -
Bda05g00129 388 CDD PP2Cc 58 347 IPR001932 -
Bda05g00129 388 ProSiteProfiles PPM-type phosphatase domain profile. 59 347 IPR001932 -
Bda05g00129 388 SMART PP2C_4 49 345 IPR001932 -
Bda05g00129 388 Gene3D - 58 354 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00129 Bda-Chr5:6002537 Bda11g00979 Bda-Chr11:9516047 4.54E-31 dispersed
Bda05g00129 Bda-Chr5:6002537 Bda12g00106 Bda-Chr12:854926 2.71E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00129 K04457 - twl:119983635 541.576