Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda05g00145 | ATGCAGTTAGCCAGCGCCTCTGTGCTACCCATGGTCCTAAAAGCAGCCATTGAGCTTAACCTTCTGGAGATCATAGCCAGAGCTGGTCATGGAGCTCTGTTGTCACCCTCAGAAATTGCAGACCAGCTCCCTACCACTAACCCCGATACAGCGGGGATGCTGGATCGCATGTTGCGCCTCTTGGCTTCCTACTCCGTTCTTACTTACTCCCTTCGCACCCTCCCTGATGGCAGAGTTGAAAGGCTTTATGGTTTGGCCCCCGTTTGCAAGTTCTTGACCAAGAACGAGGATGGTGTCTCCATCGCCCCGCTTTGTCTCATGAACCAAGACAAAGTTCTCATGGAGAGTTGGTACCACTTGAAAGATGCAGTTCTGGAAGGTGGGATTCCATTCAACAGAGCGTACGGAATGACAGCATTTGACTACCATGGGACGGATTCCAGATTTAACAAGGTTTTCAACAGAGGGATGTCGGATCACTCTACAATCACCATGAAGAAAATGCTAGAGACGTACAAAGGGTTTGAAGGGGTCGGGTCAATTGTTGATGTTGGTGGGGGGACTGGCGCAGTCCTTAGCATGATCATTTCCAAGTACCCTTCCATCAAAGGCATCAACTTTGATTTGCCTCATGTGATCGAGGATGCTCCGGATTATCCTGGTGTGGAGCACGTTGGAGGGGATATGTTCGTCAGTGTTCCAAAGGGCGATGCCATGTTCATGAAATGGATCTGCCATGACTGGAGTGACCAGCACTGTCTGAAATTTTTGAAGAATTGCTACGAGGCGCTGCCAAGAAAGGGGAAGGTGATAGTGGCGGAGTGCATACTGCCTGTGGCGCCAGACAGCAGCCTGGGCACGAAGGGGGTGGTCCACATAGACGTCATAATGTTGGCTCACAATCCAGGTGGGAAAGAGAGGACCCAGGAGGAGTTCCAGGCGCTGGCGTTGGGGGCTGGGTTTCAAGGCTTCAGAGTGGAGTGTTGCGCTTTCAATACTTATGTGATGGAGTTTGTGAAGAGTGTTTGA | 1029 | 50.92 | MQLASASVLPMVLKAAIELNLLEIIARAGHGALLSPSEIADQLPTTNPDTAGMLDRMLRLLASYSVLTYSLRTLPDGRVERLYGLAPVCKFLTKNEDGVSIAPLCLMNQDKVLMESWYHLKDAVLEGGIPFNRAYGMTAFDYHGTDSRFNKVFNRGMSDHSTITMKKMLETYKGFEGVGSIVDVGGGTGAVLSMIISKYPSIKGINFDLPHVIEDAPDYPGVEHVGGDMFVSVPKGDAMFMKWICHDWSDQHCLKFLKNCYEALPRKGKVIVAECILPVAPDSSLGTKGVVHIDVIMLAHNPGGKERTQEEFQALALGAGFQGFRVECCAFNTYVMEFVKSV | 342 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 6234137 | 6235685 | - | Bda020771.1 | Bda05g00145 | 6457 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda05g00145 | 342 | PANTHER | BNAA10G07270D PROTEIN | 1 | 341 | - | - | |
| Bda05g00145 | 342 | SUPERFAMILY | Winged helix DNA-binding domain | 1 | 96 | IPR036390 | - | |
| Bda05g00145 | 342 | CDD | AdoMet_MTases | 181 | 272 | - | - | |
| Bda05g00145 | 342 | Gene3D | - | 1 | 92 | IPR036388 | - | |
| Bda05g00145 | 342 | Pfam | Dimerisation domain | 11 | 62 | IPR012967 | GO:0046983 | |
| Bda05g00145 | 342 | PANTHER | O-METHYLTRANSFERASE | 1 | 341 | IPR016461 | GO:0008168 | |
| Bda05g00145 | 342 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 340 | IPR016461 | GO:0008168 | |
| Bda05g00145 | 342 | Pfam | O-methyltransferase domain | 117 | 322 | IPR001077 | GO:0008171 | |
| Bda05g00145 | 342 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 97 | 338 | IPR029063 | - | |
| Bda05g00145 | 342 | PIRSF | O-mtase | 1 | 340 | IPR016461 | GO:0008168 | |
| Bda05g00145 | 342 | Gene3D | Vaccinia Virus protein VP39 | 93 | 340 | IPR029063 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda05g00145 | Bda-Chr5:6234137 | Bda12g01001 | Bda-Chr12:41466125 | 5.02E-137 | dispersed | |
| Bda12g01003 | Bda-Chr12:41491586 | Bda05g00145 | Bda-Chr5:6234137 | 3.14E-78 | dispersed | |
| Bda15g01018 | Bda-Chr15:19051991 | Bda05g00145 | Bda-Chr5:6234137 | 9.37E-57 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda05g00145 | K13066 | - | zju:107414981 | 613.224 |