Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00146 ATGCACTTTCACGATTGCTTTGTCAGGGGGTGTGACGCATCGGTTCTACTGGATTCCACTTCGTCAAACATTGCAGAGAAAGAGTCTCCGGCCAACAACCCGAGTCTACGAGGATTCGAAGTCATCGACCGAGCAAAGGCCCGACTGGAAGCCTTATGCGAAGGAGTCGTCTCTTGCTCTGACATCCTCGCATTTGCAGCAAGAGACAGCATAGAGATCACGGGAGGGCCAGGGTACGACGTTCCCGCCGGAAGAAGGGACGGCAGGGTGTCACTCGCTTCCGATACATTGAGAAACTTACCTCCGCCGTCATTCCGTGTGGACCAACTCACTCGCCTGTTCGGCGAAAAGGGTTTCACCCTGAGTGAAATGGTTACACTATCCGGAGCACACACCATAGGGCGTTCCCACTGCACTTCTTTCAGTGACAGATTGTACAACTTCAACGGGACCTCCAGTGAAGATCCAAGTTTAGACCCGGAGTATGCGGCTGAGTTGAGAAGGCAGTGTCCGCAGGGCAACAGCGACACTGACGCCGTCGTTCCCATGAACCCGTCAAGCCCCGCCATCACCGACGTTTCCTATTACGTTGATGTTCTTGCGAACAGGGGGCTGTTCGCGTCGGACCAAACTCTCCTCGCAAATCCGGAAACAGCCCGACAAGTGACTCGGAATGCCAAGAATCCATGGCTTTGGAACACCACGTTTGCTAATGCGATGGTTAAGATGGGTGGACTGGATGTTTTAGCGGGCATTGCCGGAGAGATACGAACCAATTGCAGGCTCATCAACGCCTAG 798 53.88 MHFHDCFVRGCDASVLLDSTSSNIAEKESPANNPSLRGFEVIDRAKARLEALCEGVVSCSDILAFAARDSIEITGGPGYDVPAGRRDGRVSLASDTLRNLPPPSFRVDQLTRLFGEKGFTLSEMVTLSGAHTIGRSHCTSFSDRLYNFNGTSSEDPSLDPEYAAELRRQCPQGNSDTDAVVPMNPSSPAITDVSYYVDVLANRGLFASDQTLLANPETARQVTRNAKNPWLWNTTFANAMVKMGGLDVLAGIAGEIRTNCRLINA 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6260633 6261706 - Bda020773.1 Bda05g00146 6458

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00146 265 ProSiteProfiles Plant heme peroxidase family profile. 1 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 SUPERFAMILY Heme-dependent peroxidases 1 264 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 Gene3D Peroxidase, domain 2 101 243 - -
Bda05g00146 265 PRINTS Haem peroxidase superfamily signature 123 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PRINTS Haem peroxidase superfamily signature 75 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PRINTS Haem peroxidase superfamily signature 57 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 Gene3D - 1 264 - -
Bda05g00146 265 Pfam Peroxidase 1 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PRINTS Plant peroxidase signature 37 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PRINTS Plant peroxidase signature 238 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PRINTS Plant peroxidase signature 56 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PRINTS Plant peroxidase signature 75 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PRINTS Plant peroxidase signature 182 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PRINTS Plant peroxidase signature 122 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PRINTS Plant peroxidase signature 198 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 CDD secretory_peroxidase 1 263 IPR033905 GO:0004601|GO:0042744
Bda05g00146 265 ProSitePatterns Peroxidases proximal heme-ligand signature. 123 133 IPR019793 -
Bda05g00146 265 PANTHER PEROXIDASE 25-RELATED 1 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda05g00146 265 PANTHER PEROXIDASE 1 261 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00146 K00430 E1.11.1.7; peroxidase [EC:1.11.1.7] - jre:109007523 422.165
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda05g00146 Bda06g00800 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00146 Bda-Chr5:6260633 Bda10g00692 Bda-Chr10:41182644 3.91E-71 dispersed
Bda03g01249 Bda-Chr3:17873000 Bda05g00146 Bda-Chr5:6260633 2.84E-74 wgd
Bda05g00146 Bda-Chr5:6260633 Bda08g01192 Bda-Chr8:48017113 2.16E-80 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g952 . . Bda05g00146 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo07g00310 . Bda06g00800 . . . . Bma12g01250 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0014096 1 1 1 0 0 0 1 1 1 0 0 1 0 0 1 1 1 2 1 1 0 1 0 1 1 1 1 1 1 0 21
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda05g00146 Bda_Chr05 FPKM 2.527426 0.633213 0.909216 0.856052 0.0 0.477328 0.0 1.601097 0.858074