Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda05g00244 | ATGCTGGCCATCCTCGAGATTCGATGGTCAGGCATCGAGCTCGAAGAATGGTGGAGAAATGAGCAGTTTTGGTTGATCGGAGGAACTAGTGCCCACTTTGCCGCAGTTATTCAGGGCCTGCTGAAAGTCATTGCCGGAATCGAAATTTCTTTCACCTTGACTTCGAAATCTGGTGGTGATGATGTGGACGACGAGTTCGCTGATCTCTACATTGTGAAATGGTCGTCCCTGATGATTCCACCAATCACGATCATGATTACAAACTTAATCGCTATCGCAGTTGGGTTTAGCCGGACGATATACAGCACAATACCACAGTGGAGCCGTCTGATTGGTGGCGTTTTTTTCAGTTTCTGGGTTCTTGCCCATCTCTATCCTTTTGCTAAAGGGTTAATGGGGCGTAGAGGGAGGACACCCACCATTGTTTTTGTATGGTCGGGTCTGATTGCTATCACCATCTCTCTTCTTTGGGTGGCTATTAGTCCCCCGGCTGGATCAACCCAAATCGGAGGCTCATTCACATTCCCTTGA | 531 | 48.21 | MLAILEIRWSGIELEEWWRNEQFWLIGGTSAHFAAVIQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWSSLMIPPITIMITNLIAIAVGFSRTIYSTIPQWSRLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAISPPAGSTQIGGSFTFP | 176 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 41869641 | 41870171 | + | Bda021213.1 | Bda05g00244 | 6556 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda05g00244 | 176 | PANTHER | CELLULOSE SYNTHASE-LIKE PROTEIN D3 | 1 | 174 | - | - | |
| Bda05g00244 | 176 | Pfam | Cellulose synthase | 1 | 166 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
| Bda05g00244 | 176 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 1 | 174 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda05g00244 | Bda-Chr5:41869641 | Bda07g00055 | Bda-Chr7:837676 | 8.14E-98 | dispersed | |
| Bda03g01351 | Bda-Chr3:48589614 | Bda05g00244 | Bda-Chr5:41869641 | 1.81E-114 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda05g00244 | K20924 | - | egr:104424277 | 346.28 |