Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g00254 | ATGGGTACCAGACCCCAGAATCCATGCCAGGAAGATGACGACGACGACCTTCATAGCGGTCGTGCCGCCACTATTCCAGGCCAATCTGTGTCCATGAGTGGCAGCATCGGATCCCCCTCCAGCCGAAGTGAGCAAACAATGGCTACCCCAGCCAGTGACAATACTTTCCTCCGATTAAACCACCTTGATATTCACGGAGACGATGCCGGATCGCAAGGCGCTATTTCTAACAAGAAGAAAAAGAGAGGTCAGCGTGCTGTTGGAGGCGATAAGAGTGGAAGAGGGCTTCGCCAATTCAGCATGAAAGTTTGTGAAAAAGTGGAAAGCAAGGGAAGAACAACCTATAACGAGGTTGCAGATGAACTAGTGGCTGAGTTTGCTGATCCTAGCAGTAGTCTTGCATCCCCAGATCAGCAACAATATGATGAAAAGAACATCCGGCGAAGGGTATACGATGCCCTAAATGTTCTCATGGCAATGGACATAATATCGAAGGATAAGAAAGAGATACAATGGAAGGGTTTACCTCGAACAAGTCTGAATGATGTTGAAGAACTAAAGACAGAGAGGCAGGGACTTAGAAATAGAATAGATAAGAAAGCTGCATACCTGCAAGAGCTGGAGGAGCAATACGTAGGTCTTCAGAATCTGATTCAGCGAAATGAACAGTTATACAGCTCTGGAAATGCTCCAAGTGGTGGTGTGTCTTTACCTTTTATCCTGGTGCAGACCCGTCCGCACGCGACAGTTGAAGTAGAAATATCCGAAGATATGCAGCTTGTGCATTTTGACTTCAAAAGCACGCCTTTTGAGCTTCACGATGACAACTACGTATTGAAGGCGATGAAATTTTGTGAGAGGCAAGCTGGTGATAATAGTGCGCAGAATTTCATTGCAGACGGAGGGGAAGGTTCCGGAATCCAGGTCGTGTCTGTGAGGAAACCAGCATCACCACCACTTCCTGGAATTCTCAAAGCACGTGTCAAGCACGAGCACTAA | 999 | 47.05 | MGTRPQNPCQEDDDDDLHSGRAATIPGQSVSMSGSIGSPSSRSEQTMATPASDNTFLRLNHLDIHGDDAGSQGAISNKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSSSLASPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDVEELKTERQGLRNRIDKKAAYLQELEEQYVGLQNLIQRNEQLYSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFKSTPFELHDDNYVLKAMKFCERQAGDNSAQNFIADGGEGSGIQVVSVRKPASPPLPGILKARVKHEH | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 42521841 | 42532467 | + | Bda021229.1 | Bda05g00254 | 6566 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g00254 | 332 | PANTHER | TRANSCRIPTION FACTOR DP | 20 | 332 | - | - | |
Bda05g00254 | 332 | Gene3D | - | 86 | 179 | IPR036388 | - | |
Bda05g00254 | 332 | PIRSF | Txn_factor_DP | 6 | 315 | IPR015648 | GO:0005667|GO:0051726 | |
Bda05g00254 | 332 | SMART | E2F_TDP_2 | 91 | 174 | IPR003316 | GO:0005667|GO:0006355 | |
Bda05g00254 | 332 | Pfam | E2F/DP family winged-helix DNA-binding domain | 94 | 174 | IPR003316 | GO:0005667|GO:0006355 | |
Bda05g00254 | 332 | SUPERFAMILY | Winged helix DNA-binding domain | 94 | 175 | IPR036390 | - | |
Bda05g00254 | 332 | Gene3D | Transcription factor DP | 180 | 300 | IPR038168 | - | |
Bda05g00254 | 332 | PANTHER | TRANSCRIPTION FACTOR DP | 20 | 332 | IPR015648 | GO:0005667|GO:0051726 | |
Bda05g00254 | 332 | CDD | DP_DD | 179 | 282 | IPR014889 | - | |
Bda05g00254 | 332 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Bda05g00254 | 332 | Pfam | Transcription factor DP | 182 | 295 | IPR014889 | - | |
Bda05g00254 | 332 | Coils | Coil | 183 | 224 | - | - | |
Bda05g00254 | 332 | SMART | DP_2 | 181 | 330 | IPR014889 | - | |
Bda05g00254 | 332 | MobiDBLite | consensus disorder prediction | 64 | 94 | - | - | |
Bda05g00254 | 332 | MobiDBLite | consensus disorder prediction | 24 | 49 | - | - | |
Bda05g00254 | 332 | SUPERFAMILY | E2F-DP heterodimerization region | 180 | 290 | IPR037241 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15867 | PF08781 | DP | 7.30E-42 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g00254 | K04683 | - | zju:107414839 | 565.844 |