Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00254 ATGGGTACCAGACCCCAGAATCCATGCCAGGAAGATGACGACGACGACCTTCATAGCGGTCGTGCCGCCACTATTCCAGGCCAATCTGTGTCCATGAGTGGCAGCATCGGATCCCCCTCCAGCCGAAGTGAGCAAACAATGGCTACCCCAGCCAGTGACAATACTTTCCTCCGATTAAACCACCTTGATATTCACGGAGACGATGCCGGATCGCAAGGCGCTATTTCTAACAAGAAGAAAAAGAGAGGTCAGCGTGCTGTTGGAGGCGATAAGAGTGGAAGAGGGCTTCGCCAATTCAGCATGAAAGTTTGTGAAAAAGTGGAAAGCAAGGGAAGAACAACCTATAACGAGGTTGCAGATGAACTAGTGGCTGAGTTTGCTGATCCTAGCAGTAGTCTTGCATCCCCAGATCAGCAACAATATGATGAAAAGAACATCCGGCGAAGGGTATACGATGCCCTAAATGTTCTCATGGCAATGGACATAATATCGAAGGATAAGAAAGAGATACAATGGAAGGGTTTACCTCGAACAAGTCTGAATGATGTTGAAGAACTAAAGACAGAGAGGCAGGGACTTAGAAATAGAATAGATAAGAAAGCTGCATACCTGCAAGAGCTGGAGGAGCAATACGTAGGTCTTCAGAATCTGATTCAGCGAAATGAACAGTTATACAGCTCTGGAAATGCTCCAAGTGGTGGTGTGTCTTTACCTTTTATCCTGGTGCAGACCCGTCCGCACGCGACAGTTGAAGTAGAAATATCCGAAGATATGCAGCTTGTGCATTTTGACTTCAAAAGCACGCCTTTTGAGCTTCACGATGACAACTACGTATTGAAGGCGATGAAATTTTGTGAGAGGCAAGCTGGTGATAATAGTGCGCAGAATTTCATTGCAGACGGAGGGGAAGGTTCCGGAATCCAGGTCGTGTCTGTGAGGAAACCAGCATCACCACCACTTCCTGGAATTCTCAAAGCACGTGTCAAGCACGAGCACTAA 999 47.05 MGTRPQNPCQEDDDDDLHSGRAATIPGQSVSMSGSIGSPSSRSEQTMATPASDNTFLRLNHLDIHGDDAGSQGAISNKKKKRGQRAVGGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPSSSLASPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDVEELKTERQGLRNRIDKKAAYLQELEEQYVGLQNLIQRNEQLYSSGNAPSGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFKSTPFELHDDNYVLKAMKFCERQAGDNSAQNFIADGGEGSGIQVVSVRKPASPPLPGILKARVKHEH 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 42521841 42532467 + Bda021229.1 Bda05g00254 6566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00254 332 PANTHER TRANSCRIPTION FACTOR DP 20 332 - -
Bda05g00254 332 Gene3D - 86 179 IPR036388 -
Bda05g00254 332 PIRSF Txn_factor_DP 6 315 IPR015648 GO:0005667|GO:0051726
Bda05g00254 332 SMART E2F_TDP_2 91 174 IPR003316 GO:0005667|GO:0006355
Bda05g00254 332 Pfam E2F/DP family winged-helix DNA-binding domain 94 174 IPR003316 GO:0005667|GO:0006355
Bda05g00254 332 SUPERFAMILY Winged helix DNA-binding domain 94 175 IPR036390 -
Bda05g00254 332 Gene3D Transcription factor DP 180 300 IPR038168 -
Bda05g00254 332 PANTHER TRANSCRIPTION FACTOR DP 20 332 IPR015648 GO:0005667|GO:0051726
Bda05g00254 332 CDD DP_DD 179 282 IPR014889 -
Bda05g00254 332 MobiDBLite consensus disorder prediction 1 49 - -
Bda05g00254 332 Pfam Transcription factor DP 182 295 IPR014889 -
Bda05g00254 332 Coils Coil 183 224 - -
Bda05g00254 332 SMART DP_2 181 330 IPR014889 -
Bda05g00254 332 MobiDBLite consensus disorder prediction 64 94 - -
Bda05g00254 332 MobiDBLite consensus disorder prediction 24 49 - -
Bda05g00254 332 SUPERFAMILY E2F-DP heterodimerization region 180 290 IPR037241 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15867 PF08781 DP 7.30E-42 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00254 K04683 - zju:107414839 565.844