Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00320 ATGGTTGTTCCACTTAATACTTGGGTACTCATCTCCAATTTCAAGCTATCTTATAATATGCTCAGAAGGCCAGATGGAACATTTAACCGAGAATTGGCAGAGTTTCTGGACCGAAAGGTATCTGCAAATACAATTCCAGTCGATGGGGTCTTCTCTTTTGATCATGTCGATCGAGTCTCTGGCCTTCTCAATCGAATTTATCAACCAGCCCCAGAAAATGAGGCAGTGTGGGGAATTTCCGAGCTGCAAAAGCCCTTGAGCACGACGATGATTGTACCCGTCATAATTTTCTTCCATGGGGGAAGCTTCGCTCATTCTTCAGCCAATAGTGCTATTTACGATACATTCTGCCGCCGCCTCGTGAACATTTGCAGGGCCGTAATCGTGTCTGTTAATTATCGAAGGGCCCCTGAGCATCGATATCCTTGCGCATACAATGATGGGTGGGCTGCTCTTAAGTGGGTCAACTCGAGAAAATGGCTTCAAAGTGGGGAGGATTCTAAGGTTCATATATACTTAGCCGGAGATAGTTCCGGTGGCAACATTGCTCACCATGTCGCTTTGAGGGCGGCCGAAGAAAATGTTGAGGTGCTTGGAAATATTCTTCTTCATCCCATGTTTGGCGGACAGAAGAGAACAGAATCAGAGAAGCAATTGGATGGAAAATATTTCGTCACTCTTCAAGATCGAGATTGGTATTGGAGGGCTTATCTTCCCGAAGGAGAAGATAGAGATCATCCGGCCTGCAATATATTTGGACTGAGGAGTCGATCCTTAGAAGGGCTAAACTTTCCGAAAAGTCTCGTGGTTGTTGCCGGATTGGATCTCATTCAAGATTGGCAACTTGCTTACATCCAAGGACTCGAACAATCAGGCCATAATGTAAAACTTCTCTTCCTTAAGGAAGCCACAATTGGATTCTACTTTCTGCCAAATAATGAGCATTTCTACTGCCTCATGGAGGAGATAAATGACTTCGTAAATTCTAACAGATAA 996 44.38 MVVPLNTWVLISNFKLSYNMLRRPDGTFNRELAEFLDRKVSANTIPVDGVFSFDHVDRVSGLLNRIYQPAPENEAVWGISELQKPLSTTMIVPVIIFFHGGSFAHSSANSAIYDTFCRRLVNICRAVIVSVNYRRAPEHRYPCAYNDGWAALKWVNSRKWLQSGEDSKVHIYLAGDSSGGNIAHHVALRAAEENVEVLGNILLHPMFGGQKRTESEKQLDGKYFVTLQDRDWYWRAYLPEGEDRDHPACNIFGLRSRSLEGLNFPKSLVVVAGLDLIQDWQLAYIQGLEQSGHNVKLLFLKEATIGFYFLPNNEHFYCLMEEINDFVNSNR 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 46291417 46292412 - Bda021351.1 Bda05g00320 6632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00320 331 Gene3D alpha/beta hydrolase 1 329 IPR029058 -
Bda05g00320 331 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 171 183 IPR033140 -
Bda05g00320 331 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 95 111 IPR002168 GO:0016787
Bda05g00320 331 PANTHER GIBBERELLIN RECEPTOR GID1B 2 328 - -
Bda05g00320 331 SUPERFAMILY alpha/beta-Hydrolases 92 328 IPR029058 -
Bda05g00320 331 PANTHER ARYLACETAMIDE DEACETYLASE 2 328 - -
Bda05g00320 331 Pfam alpha/beta hydrolase fold 95 308 IPR013094 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00320 Bda-Chr5:46291417 Bda12g00035 Bda-Chr12:215656 0 dispersed
Bda10g00605 Bda-Chr10:40077359 Bda05g00320 Bda-Chr5:46291417 6.16E-16 wgd
Bda04g00582 Bda-Chr4:54510769 Bda05g00320 Bda-Chr5:46291417 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00320 K14493 - pop:7458234 602.053