Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00415 ATGCTCGGGGCATTGGGATGTGTATTCCCGGAGCTCCTCTCTAGAAACGGGGTCCAGTTCGGCGAAGCCGTCTGGTTCAAAGCCGGTTCACAAATATTCAGCGAGGGAGGGCTGGACTACCTCGGAAACCCAAGCCTGGTTCATGCACAGAGCATTTTGGCCATTTGGGCATCTCAGGTTATCTTGATGGGTGCCGTTGAGGGTTACCGTGTTGCCGGAGGGCCACTCGGGGAGGTGACCGACCCCATCTACCCAGGAGGAAGCTTTGATCCCCTGGGACTTGCTGATGACCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAAATCAAGAATGGACGACTAGCTATGTTCTCCATGTTCGGATTCTACGTGCAAGCAATTGTCACCGGAAAGGGACCTTTGGAGAACCTCGCCGATCATCTGGCCGACCCTGTAAACAACAATGCTTGGGCTTATGCCACCAACTTTGTACCTGGAAAGTGA 483 53.42 MLGALGCVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFYVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 49747641 49748123 - Bda021492.1 Bda05g00415 6727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00415 160 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 160 IPR001344 GO:0009765|GO:0016020
Bda05g00415 160 Pfam Chlorophyll A-B binding protein 1 126 IPR022796 -
Bda05g00415 160 SUPERFAMILY Chlorophyll a-b binding protein 1 157 - -
Bda05g00415 160 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 160 - -
Bda05g00415 160 Gene3D Chlorophyll a/b binding protein domain 1 153 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00415 Bda-Chr5:49747641 Bda05g00395 Bda-Chr5:48965605 1.27E-114 dispersed
Bda05g00415 Bda-Chr5:49747641 Bda07g00939 Bda-Chr7:10931663 5.19E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00415 K08912 - mnt:21386410 323.939