Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g00415 | ATGCTCGGGGCATTGGGATGTGTATTCCCGGAGCTCCTCTCTAGAAACGGGGTCCAGTTCGGCGAAGCCGTCTGGTTCAAAGCCGGTTCACAAATATTCAGCGAGGGAGGGCTGGACTACCTCGGAAACCCAAGCCTGGTTCATGCACAGAGCATTTTGGCCATTTGGGCATCTCAGGTTATCTTGATGGGTGCCGTTGAGGGTTACCGTGTTGCCGGAGGGCCACTCGGGGAGGTGACCGACCCCATCTACCCAGGAGGAAGCTTTGATCCCCTGGGACTTGCTGATGACCCAGAGGCATTTGCAGAGCTTAAGGTGAAAGAAATCAAGAATGGACGACTAGCTATGTTCTCCATGTTCGGATTCTACGTGCAAGCAATTGTCACCGGAAAGGGACCTTTGGAGAACCTCGCCGATCATCTGGCCGACCCTGTAAACAACAATGCTTGGGCTTATGCCACCAACTTTGTACCTGGAAAGTGA | 483 | 53.42 | MLGALGCVFPELLSRNGVQFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFYVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK | 160 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 49747641 | 49748123 | - | Bda021492.1 | Bda05g00415 | 6727 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g00415 | 160 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 160 | IPR001344 | GO:0009765|GO:0016020 | |
Bda05g00415 | 160 | Pfam | Chlorophyll A-B binding protein | 1 | 126 | IPR022796 | - | |
Bda05g00415 | 160 | SUPERFAMILY | Chlorophyll a-b binding protein | 1 | 157 | - | - | |
Bda05g00415 | 160 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 1 | 160 | - | - | |
Bda05g00415 | 160 | Gene3D | Chlorophyll a/b binding protein domain | 1 | 153 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda05g00415 | Bda-Chr5:49747641 | Bda05g00395 | Bda-Chr5:48965605 | 1.27E-114 | dispersed | |
Bda05g00415 | Bda-Chr5:49747641 | Bda07g00939 | Bda-Chr7:10931663 | 5.19E-115 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g00415 | K08912 | - | mnt:21386410 | 323.939 |