Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00421 ATGGTGCTCATGGCCCCTTCAATGCCATCTGAACAGCATACCCCACTGCCGTTGTCTGAGATGCCATTACAAGATGTTTCTCCTCATGATTCCAGAAGTGGAGATACAAAAACAATTTCTTCAGTTAAACATGGAACTATGAACAGTTCACCAGCTTATTCAGAACTCGTAGACTGTGCTGCAGTGAAAAGCAAGATGAATAACTTTGATTTGAATGACATATATATTGATTCTGATGATGGAATAGAGGATGTGGAGACACTTCCTGTACATTTGGGGACAAGTTCCCTAGAGTCTCCTTGGGCCGGACAAGATTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCAGCATCTGCTCAGTCGCCTTCGAGTTCTAGTGGAGAAGCTCAGAGCCGCACAGATCGTATTGTTATTAAACTATTTGGAAAAGATCCCAGTGATTTCCCTCTTGACCTACGAGCACAGGTTCTTGACTGGTTGGCACATTGTCCTACAGACATGGAGAGCTACATTAAGCCTGGTTGTGTGGTTCTTACCATCTATCTACGTCAGACAGAGGATGCTTGGGAGGAACTTTGCTATGACATATGTTGTAGCTTGAACAGGCTCCTCCAAGGCTCAGATGATACTTTCTGGAGAACGGGATGGATTTATGCCAGAATTCAGCATCATTTAGCATTTGCTTTTCATGGTCAAGTTATGGTGGATACGTCATTATCTCTCAGAAGCTCCCATTATTGTAATATTGTCAGTGTAAAACCTATCGCCGTATCTGCTTCAGAAAGGATTCAGTTTTCAGTTAGAGGCTTGAACTTGAAGCGGCCTGGAACAAGGTTACTCTGTGCACTTGAAGGGAAGTATCTGACTGAGAAGGAAACTCAAGAATCAACTGACATTGATTCAGTTAAGGAGCATGATGATCATAATGAGCTGGAGTTCATCAGCTTTTCTTGTTCTATTCCGGTTGTAAATGGAAGGGGCTTCATTGAGGTTGAAGATCTTGGATTCAGCAGCAGCTTCTTTCCATTTATAGTTGCGGAGGATGATGTATGTTCAGATATTTGTGTTCTTGAGGCTACTCTGGAGCTGACTGATACGAGCTCAGACGCAACGGGAGCAGTGACGGAAGCAAGGAGGCAAGCCATGGATTTTATTCATGAAATGGGGTGGCTTCTTCATAGGAAACAATTGAACTCTAGATTGAAGATTATGAATCAAAATGCAGATACTTACCCTTTGGATCGGTTCAAGTGGCTTATGGATTTCTCGATGAACCGTGATTGGTGTGCTGTAGTGAGGAAATTATTAAATATTCTGTTTGATGGAATTGTGAGTAATGGAGATCACCCCTCTCTGAATGAGGCCTTATTCGAGATGAGTCTTCTACACCGGGCTGTAAGGAGAAGCAGTAAGTCGCTTGTGGAGCTCCTTTTGAGATTCAAGCCCCAAAAAGTGACAACAGAAAACGAAGTGGTTGATGGATTTTTGTTTAGGCCTGATGCTGCAGGACCTGCCGGCTTGACCCCACTTCACATCGCAGCTGCTAAAGATGGGTCTGAGGATGTTCTTGATGCATTAACCGACGACCCTGGAATGGTTGGAATTGAAGCATGGAGGAATGCTCGGGACAGCACGGGGTCCACACCTGAAGCCTACGCACGCTTACGTGGCCATTTTTCGTACATCCACCTCATCCAGAGGAAAATCAACAAGAGAGCTTCCTCTGGGCATGTGGTTCTCGATATTCCTAGTGTTGTTCACTCGGATCATAGCACAAATGATAAACAAATGGACAACTTGGGCAGCAGCGCCTTTGAGATCAGACTGACCCAGCCGAGACCCAACTGCAGAGTCTGTGATAAGAAACTCAGCTATGGAAAATTGAGGCCATCACTGGTTTACCGGCCTGCAATGTTGTCGATGGTGGCTATAGCAGCCGTCTGTGTGTGTGTGGCACTTCTGTTCAAAAGCTCGCCGGAAGTCCTTTATGTATTCCGGCCGTTCAGGTGGGAGTTGTTAGATTATGGAACGTGCTGA 2049 44.9 MVLMAPSMPSEQHTPLPLSEMPLQDVSPHDSRSGDTKTISSVKHGTMNSSPAYSELVDCAAVKSKMNNFDLNDIYIDSDDGIEDVETLPVHLGTSSLESPWAGQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVIKLFGKDPSDFPLDLRAQVLDWLAHCPTDMESYIKPGCVVLTIYLRQTEDAWEELCYDICCSLNRLLQGSDDTFWRTGWIYARIQHHLAFAFHGQVMVDTSLSLRSSHYCNIVSVKPIAVSASERIQFSVRGLNLKRPGTRLLCALEGKYLTEKETQESTDIDSVKEHDDHNELEFISFSCSIPVVNGRGFIEVEDLGFSSSFFPFIVAEDDVCSDICVLEATLELTDTSSDATGAVTEARRQAMDFIHEMGWLLHRKQLNSRLKIMNQNADTYPLDRFKWLMDFSMNRDWCAVVRKLLNILFDGIVSNGDHPSLNEALFEMSLLHRAVRRSSKSLVELLLRFKPQKVTTENEVVDGFLFRPDAAGPAGLTPLHIAAAKDGSEDVLDALTDDPGMVGIEAWRNARDSTGSTPEAYARLRGHFSYIHLIQRKINKRASSGHVVLDIPSVVHSDHSTNDKQMDNLGSSAFEIRLTQPRPNCRVCDKKLSYGKLRPSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYVFRPFRWELLDYGTC 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 49870774 49874585 - Bda021499.1 Bda05g00421 6733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00421 682 SUPERFAMILY Ankyrin repeat 461 569 IPR036770 -
Bda05g00421 682 MobiDBLite consensus disorder prediction 33 47 - -
Bda05g00421 682 MobiDBLite consensus disorder prediction 1 47 - -
Bda05g00421 682 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 39 681 IPR044817 GO:0003677
Bda05g00421 682 MobiDBLite consensus disorder prediction 95 135 - -
Bda05g00421 682 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 39 681 - -
Bda05g00421 682 Gene3D - 432 582 IPR036770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00421 Bda-Chr5:49870774 Bda11g00488 Bda-Chr11:5154402 0 dispersed
Bda12g00119 Bda-Chr12:1052667 Bda05g00421 Bda-Chr5:49870774 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00421 - - jre:108999895 858.211