Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00447 ATGGACTGGGTTCGTGGTCGCAAACTGGGTTCCGGTGCTTTTCCGACGGTCTATTTGGCAAGCAAGAGGGATGATTCCGATCTCTTTCCGCCTTTGATGGCCGTTAAATCTTCTAAATTCTCGTTCTCTCAATCGCTCAGGCACGAGAGAGAATTTCTGCGGCGACTTGATTCTTGCCCGGAGATCATTCGCTGTTTCGGCGACGATATCACCGTCGAAAGGGGGCAGAAGTTGTACAATCTCGTTTTGGAGTACGCTTCCGGAGGGAGTCTGTTGCATCAACTGGACATGTACGGCGGTCGTTTGCCAGAATCGTTAGTTCGGCGATACACCAGAGGAATATTGAAAGGGCTTGATTTCATTCACTCCAAAGGGTTCGTCCACTGTGACATAAAACTCAGGAATATTTTGGTGGTCGACAATGGCGATGTTAAGATCGCTAATTTTGGGCTGGCGAAGATGGCCGGGGAAGAAATATCAACGGAAGAAGGAAACTTTGAGTTGAGGGGAAGGCCTCTGTCTGTTGCGCCGGAATCCATCACCGACAACCAGTACGAGTCACCGTGCGACATTTGGGCTCTTGCCTGTGCCGCCGTCGAGATGTGCACCGGAAAATCAGCCTGGAATTTCAGCAACAACTGTGCAGCAAGCATGGGCATTGGCGTCGGAATGGAGGTCCCCGTTATTCCGACAGATTTATCCGAAGAGGGGAAAGATTTTCTAGAGAAATGTTTTATAAAGGATCCTACTAAAAGATGGAGCGCTCAAATGCTACTGAATCATCCATTTGTGGCGGATGATCCTGTTCCATCAAAGCAACCTATGGAGTCATCGCGGTCGCTGAGATCTCCCGTCGAATTGCCGGATTGGTTTTCCCATTCGTACATGAGACAACCTAGGGAGTCATCGCGGTCGCCGAGATCTCCCGTCAAATTGCCGGATTGGTTTTCCCATTCGTACAAGAGACAACCTAGGGAGTCATCGCGGTCGCCGAGATCTCCTGTCGAATTGCCGGATTGGATTTCCCATTCGTACATGAGACAACCTAGGGAGTCATCCCGGTCGCCGAGATCTCCCGTCGAATTGCCGGATTGGTTTTCCCATTCGTACAAGAGACAACCTAGGGAGTCATCGCGGTCGCCGAGATCTCCTGTCGAATTGCCGGATTGGATTTCCCATTCGTACATGAGACAACCTAGGGAGTCATCCCGGTAG 1215 50.62 MDWVRGRKLGSGAFPTVYLASKRDDSDLFPPLMAVKSSKFSFSQSLRHEREFLRRLDSCPEIIRCFGDDITVERGQKLYNLVLEYASGGSLLHQLDMYGGRLPESLVRRYTRGILKGLDFIHSKGFVHCDIKLRNILVVDNGDVKIANFGLAKMAGEEISTEEGNFELRGRPLSVAPESITDNQYESPCDIWALACAAVEMCTGKSAWNFSNNCAASMGIGVGMEVPVIPTDLSEEGKDFLEKCFIKDPTKRWSAQMLLNHPFVADDPVPSKQPMESSRSLRSPVELPDWFSHSYMRQPRESSRSPRSPVKLPDWFSHSYKRQPRESSRSPRSPVELPDWISHSYMRQPRESSRSPRSPVELPDWFSHSYKRQPRESSRSPRSPVELPDWISHSYMRQPRESSR 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 50539491 50540705 - Bda021533.1 Bda05g00447 6759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00447 404 SUPERFAMILY Protein kinase-like (PK-like) 2 309 IPR011009 -
Bda05g00447 404 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 333 - -
Bda05g00447 404 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 333 - -
Bda05g00447 404 Gene3D Transferase(Phosphotransferase) domain 1 2 327 - -
Bda05g00447 404 Pfam Protein kinase domain 5 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00447 404 SMART serkin_6 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00447 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Bda05g00447 404 CDD STKc_MAPKKK 2 264 - -
Bda05g00447 404 MobiDBLite consensus disorder prediction 296 404 - -
Bda05g00447 404 ProSiteProfiles Protein kinase domain profile. 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00447 Bda-Chr5:50539491 Bda11g01438 Bda-Chr11:19518146 1.36E-171 dispersed
Bda05g00447 Bda-Chr5:50539491 Bda05g00448 Bda-Chr5:50562015 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69622 PF00069 Pkinase 5.30E-49 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00447 - - zju:107424505 347.821