Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00457 ATGTGTGGTGGTTCTGAAACACTAAATTCAGCATCTACTGATACCTCGTCTGCTGCACAAATTACTACTGCTAAGCCGAAAGACATGAGATGCTTGATAACTGGAACTGAATTTTCTTTATACAACTTGTTGGAATTTGCTTCTGATAATAACGTCGAAGGATTTAAACGATTGATAGATTGTGATGCATCTTCCATTAATAAATCTGGACTGTGGTATGTCCGTCATAGTGGCTCAAAGCAGGTTGTTCAAGAGGATAGAACCCCACTAATGGTTGCTGCTACCTATGGTAGTGTTAATGTCCTGAAACTTTTGCTTTCGATACCTGAGATTGATGTAAATCTCTCATCTGGACTGGATAAAAGCACTGCCCTTCATTGTGCTGCTTCTGGTGGATCTATCAGCATTTTTGAGGCTGTTAATATTCTTTTATCTGCGGGCGCGGATCCAAATTCGGTTGATGCAAATGGTTATCGCCCTGTAGATGTCATTTATGTACATCCAAAGCTGCATAACATGAAGGTCAAGCTTGAGGAACTATTAAGTAGTGATTGTCATCCTGATGAATTGACCTCCTTGCAATTATCCTTCATTACCTCATGTTCTTTATCACCTGCTCTCACTTCAGATCCAGAGAAGGAATTTTTATCTTTGGAGTCAACATCTTCTCTTGTTAGGAAAAGTACTGATGAGTCTGTTAATTCTACTGTGGAGAAGAAAGAATATCTAATTGATCCTTCTCTTCCTGACATCAAAAATAGTATTTATGCAACTGATGAGTTTCGCATGTTTTCCTTCAAGGTGAGACCTTGTTCACGAGCATATTCACATGATTGGACTGATTGTCCTTTTGTTCACCCTGGGGAGAATGCTCGCAGAAGGGATCCAAGAAAGTTTCACTACAGTTGTGTACCTTGTCCAGATTTTCGAAAGGGTGCTTGTAGGCGTGGAGACATGTGTGAATATGCACATGGGGTGTTTGAGTGCTGGCTCCATCCTGCTCAGTATCGAACACGCCTATGCAAGGATGGGGCAAGTTGTGATAGACGGGTTTGTTTTTTTGCCCATGCAACTGAGGAGCTCAGGCCCTTGTATGTTTCTACTGGTTCTGCTGTTCCTTCGCCATGGTCGTCAACATCAGCACCTAATGTTATGGACATGGCCGCCGCATTAAGTCTCTTTCCTAGATCTCCTTCATCATTATCAGTCATGTCTCCTTCTCCATTTTCTCAGCCAATGTCTCCTCCATTTTCTCAGCCAATGTCTCCTTCTCCATTTTCTCAGCCAATGTCTCCTTCTCCATTTTCTCAGTCAATGTCTCCAGCCGCAACAGCCTGGGGTCAGCCAAATGTACCCACTCTTGATCTCCCTGGAAGCAGCTTACAATCCAGTCGCCTGAGAACTTCTTTTAGTGCCAGAGACATGTCACTGGAAGATTTAAATAGGTTGATGAATCATGACTCAGAGAAACAGCTTGTGAGTGACGAGAATTTTTTCTCGCAGCTCCGCCCTAGTTCTGTCTGTCTTAGCCGCTCTGGCAGACCTAAAACTGTAACTCCTTCCAATCTGGAAGAGCTTTTCTTTTCTGAGATATCCTCATCACCTCGATTTTCTGATCCTGGAGCAGCCTCTGTGTTTTCTCCAACTTACAAATCGGCCTTTTTGTCACAATTTCAACAACGGCAGAGCATGTTGTCACACATTAATACTAATCTTCTGTCTCCTAAAACTGTTGAACTCCCATTGCAGCATGCCTCTTTGGGAGCCTTGTCTCCTGGACGGATGTCGCCAAGAAATGCTGATCCGATATCTCCTATGGGCTCTAGACTTTCTCCATTTGCTCATGGCGAGAAGCATCAAAATCTTCATTGCTTGAGCTCTAGGGACCTTGGTTCCAACATTCCTGTCTCAAATGGTTCCCCAGTAAAGTTTTGGTCGAAATGGGGTTCTGCTATGGGAAAAGCGGATTGGTCAGTTCATGGGGATGAACGGGCTCGTATGAGAGGATCATCGTTACTTGAGCTTGGTAATGATGTGGAGGAGTCTGATTTCTCATGGGTCCAAACCCTTGTCAAAGAATCTCCACCAGAAATTATGACAGACAAGTTAACAGTTCCAGTCCCAGGCGGTGCAGTGCCCTGTGAGGCTTTGACTACTAATTCTCAATTTGAATCCATTGATCATTTGGTTTTAGGATCTTTGCTTGAGCAGATGCCAGCTTGA 2223 43.54 MCGGSETLNSASTDTSSAAQITTAKPKDMRCLITGTEFSLYNLLEFASDNNVEGFKRLIDCDASSINKSGLWYVRHSGSKQVVQEDRTPLMVAATYGSVNVLKLLLSIPEIDVNLSSGLDKSTALHCAASGGSISIFEAVNILLSAGADPNSVDANGYRPVDVIYVHPKLHNMKVKLEELLSSDCHPDELTSLQLSFITSCSLSPALTSDPEKEFLSLESTSSLVRKSTDESVNSTVEKKEYLIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTDCPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGASCDRRVCFFAHATEELRPLYVSTGSAVPSPWSSTSAPNVMDMAAALSLFPRSPSSLSVMSPSPFSQPMSPPFSQPMSPSPFSQPMSPSPFSQSMSPAATAWGQPNVPTLDLPGSSLQSSRLRTSFSARDMSLEDLNRLMNHDSEKQLVSDENFFSQLRPSSVCLSRSGRPKTVTPSNLEELFFSEISSSPRFSDPGAASVFSPTYKSAFLSQFQQRQSMLSHINTNLLSPKTVELPLQHASLGALSPGRMSPRNADPISPMGSRLSPFAHGEKHQNLHCLSSRDLGSNIPVSNGSPVKFWSKWGSAMGKADWSVHGDERARMRGSSLLELGNDVEESDFSWVQTLVKESPPEIMTDKLTVPVPGGAVPCEALTTNSQFESIDHLVLGSLLEQMPA 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 50858516 50860738 + Bda021546.1 Bda05g00457 6769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00457 740 MobiDBLite consensus disorder prediction 404 441 - -
Bda05g00457 740 Pfam Ankyrin repeats (3 copies) 47 154 IPR002110 GO:0005515
Bda05g00457 740 SUPERFAMILY Ankyrin repeat 46 191 IPR036770 -
Bda05g00457 740 SMART c3hfinal6 335 358 IPR000571 GO:0046872
Bda05g00457 740 SMART c3hfinal6 300 326 IPR000571 GO:0046872
Bda05g00457 740 MobiDBLite consensus disorder prediction 409 430 - -
Bda05g00457 740 ProSiteProfiles Ankyrin repeat profile. 120 155 IPR002110 GO:0005515
Bda05g00457 740 Gene3D - 40 181 IPR036770 -
Bda05g00457 740 SMART ANK_2a 120 152 IPR002110 GO:0005515
Bda05g00457 740 SMART ANK_2a 39 68 IPR002110 GO:0005515
Bda05g00457 740 SMART ANK_2a 85 115 IPR002110 GO:0005515
Bda05g00457 740 ProSiteProfiles Ankyrin repeat profile. 85 107 IPR002110 GO:0005515
Bda05g00457 740 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 420 738 - -
Bda05g00457 740 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 24 416 - -
Bda05g00457 740 ProSiteProfiles Zinc finger C3H1-type profile. 305 327 IPR000571 GO:0046872
Bda05g00457 740 ProSiteProfiles Ankyrin repeat region circular profile. 85 107 - -
Bda05g00457 740 ProSiteProfiles Ankyrin repeat region circular profile. 120 154 - -
Bda05g00457 740 PANTHER UNKEMPT FAMILY MEMBER 420 738 IPR045234 -
Bda05g00457 740 PANTHER UNKEMPT FAMILY MEMBER 24 416 IPR045234 -
Bda05g00457 740 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 305 325 IPR000571 GO:0046872
Bda05g00457 740 Gene3D - 300 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00457 Bda-Chr5:50858516 Bda05g01048 Bda-Chr5:58908454 0 dispersed
Bda05g00457 Bda-Chr5:50858516 Bda05g00458 Bda-Chr5:50910532 0 tandem
Bda03g01613 Bda-Chr3:55407507 Bda05g00457 Bda-Chr5:50858516 0 transposed
Bda10g00722 Bda-Chr10:41641769 Bda05g00457 Bda-Chr5:50858516 0 wgd
Bda12g00153 Bda-Chr12:1353204 Bda05g00457 Bda-Chr5:50858516 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15878 PF12796 Ank_2 4.70E-10 CL0465 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00457 - - zju:107417606 874.774