Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00491 ATGGTTGTCATTTTATCCACAGGACACATCTCAGGAGCTCATCTAAATCCAGCAATCACCATTTCCTTTGCTGCCTTAAAGCATTTCCCATGGAAACATGTTCCGGCACATATCGGAGCACAGGTGGTTGCCTCTTTGTGCGCTGCATTTGCATTAGATGTGATTTTCCACCCTATCATGGGCGGGGGAGTTACTGTTCCTTCAGGAGGAATTGGTCAAGCTTTTGCTTTGGAATTTTTCGTCAGCTTCAACCTCATGTTTGTTGTCACAGCTGTGGCCACTGATACAAAAGCTGTGGGAGAGCTGGCCGGAATCACAGTCGGAGCTACTGTCATGCTCAATGTGCTAATTGCTGGGGAAACATCTGGAGCGTCAATGAACCCAGTGAGAACACTTGGACCGGCTATAGTAACACACAACTATAAAGCCATATGGGTTTACCTTACTGCTCCTTTCCTCGGGGCGCTGCTCGGCGCTGGAACTTATTCTGCCGTAAAGATGCCAGAAAAATAA 513 47.37 MVVILSTGHISGAHLNPAITISFAALKHFPWKHVPAHIGAQVVASLCAAFALDVIFHPIMGGGVTVPSGGIGQAFALEFFVSFNLMFVVTAVATDTKAVGELAGITVGATVMLNVLIAGETSGASMNPVRTLGPAIVTHNYKAIWVYLTAPFLGALLGAGTYSAVKMPEK 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51712760 51713703 - Bda021586.1 Bda05g00491 6803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00491 170 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 170 - -
Bda05g00491 170 Pfam Major intrinsic protein 2 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g00491 170 PRINTS Major intrinsic protein family signature 145 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g00491 170 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g00491 170 PRINTS Major intrinsic protein family signature 77 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g00491 170 PRINTS Major intrinsic protein family signature 108 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda05g00491 170 Gene3D Glycerol uptake facilitator protein. 1 170 IPR023271 -
Bda05g00491 170 ProSitePatterns MIP family signature. 14 22 IPR022357 -
Bda05g00491 170 SUPERFAMILY Aquaporin-like 1 168 IPR023271 -
Bda05g00491 170 PANTHER AQUAPORIN NIP2-1 1 170 IPR034294 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00491 Bda-Chr5:51712760 Bda07g00175 Bda-Chr7:2155047 1.14E-85 dispersed
Bda12g00572 Bda-Chr12:11762990 Bda05g00491 Bda-Chr5:51712760 7.21E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00491 K09874 - pop:7487062 290.426