Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00496 ATGGCGGATCTCAAAGAACGATTGCTTCCTGCTAGAGCTGCATCCGCCATTACCCTTGGGGAGTCGTCTCATCGACCATCTTCCCATGGAAGGCCGCCTTTTCAAGGGCTGGATCTATCTGGATTGAAGAAACGAGGTCAAGGAGCTCGATCTTGGATCCAAGTTGACTTATCTGGAAACTCTCAATGTATTGAGGTTGATAAGTTTACCATGATGCAACGTTGCGATCTTCCTGCTCGTGATTTGCGTCTGCTAGATCCTCTATTTTTCTATCCAACTACAATACTTGGCAGGGAGAAAGCTATTGTCATTAATCTGGAGCAAATTCGATGCATTATCACTGCAGACGAGGTTCTGTTGTTGAATTCACTTGATAGTTATGTTCTGCAATATGCAGAAGAACTTCAACGGCGACTAATAGCTAATGGGACTGGTGGGGTTTGGCAATCAGAAGGTCTTGACTTGAACTGGAGGAGGGGAGGTAGCAACTTTGATAATGCGTGTAGTAGCACATCACCTGATTACTTGCCGTTTGAGTTTAGGGCTCTAGAAGTTGTTCTTGAAACTGCTTGTACGTTTCTTGATTCCCAGGCAGCAGAATTAGAATTTGAAGCACACCCATTGTTAGATGAACTCATATCAAAGATCAGTACATTAAATTTGGAGCGTGCACGGAGATTGAAAAGCAGACTTGTTGCCTTGACTCGTAGAGTTCAGAAAGTTAGGGACGAAATGGAGCAACTCATGAATGATGATGGCGATATGGCTGAAATGTATCTCACGAAAAAGAAAAGGCTGATGGAGGCTTCATTTTTCGGTGGTCAGTCTTTGATGCCAAACAAATCGACAGATGGAGCTTCAGCTTCTGCGCCTGCTTCACCTGTATCTGCCCCTCCTGGAGCCAGAAAGCTGGAGAAGAGCTTTAGTATTGCTAGGAGTCGACATGAGAGCGCGAGGAGTTCAGAAAGTGCTACTGATAGTATAGAAGAGCTTGAGAAGTTGTTGGAAGCATATTTTGTTGTCATTGATAGCACCCTTAATAAATTGACATCATTGAAAGAGTACATCGATGACACTGAAGATTTAATCAACATTCAGCTGGATAATGTAAGGAACCAGCTGATCCAGTTCGAGCTACTACTCACAACGGCAACCTTCGTGGTTGCTATCTTCGGGGTGGTTGCAGGGATCTTCGGTATGAACTTCTCAATACCGCTTTTTGACGACGGAGGTGCATTTAAGTGGGTTCTTGTAATTACAGGAGTAACTGGTATATGCATTTTTTCTGCGTTTCTTTGGTTTTTCAAAAATAGAAGACTCATGCCATGGTAG 1332 43.62 MADLKERLLPARAASAITLGESSHRPSSHGRPPFQGLDLSGLKKRGQGARSWIQVDLSGNSQCIEVDKFTMMQRCDLPARDLRLLDPLFFYPTTILGREKAIVINLEQIRCIITADEVLLLNSLDSYVLQYAEELQRRLIANGTGGVWQSEGLDLNWRRGGSNFDNACSSTSPDYLPFEFRALEVVLETACTFLDSQAAELEFEAHPLLDELISKISTLNLERARRLKSRLVALTRRVQKVRDEMEQLMNDDGDMAEMYLTKKKRLMEASFFGGQSLMPNKSTDGASASAPASPVSAPPGARKLEKSFSIARSRHESARSSESATDSIEELEKLLEAYFVVIDSTLNKLTSLKEYIDDTEDLINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFSIPLFDDGGAFKWVLVITGVTGICIFSAFLWFFKNRRLMPW 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 51751997 51754323 - Bda021594.1 Bda05g00496 6808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00496 443 Pfam CorA-like Mg2+ transporter protein 333 431 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bda05g00496 443 Gene3D Magnesium transport protein CorA, transmembrane region 131 374 - -
Bda05g00496 443 MobiDBLite consensus disorder prediction 282 302 - -
Bda05g00496 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 432 IPR045863 -
Bda05g00496 443 CDD Mrs2_Mfm1p-like 52 440 IPR039204 -
Bda05g00496 443 Gene3D - 37 123 - -
Bda05g00496 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
Bda05g00496 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 442 IPR039204 -
Bda05g00496 443 Coils Coil 224 251 - -
Bda05g00496 443 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00496 Bda-Chr5:51751997 Bda11g01176 Bda-Chr11:12156585 3.20E-140 dispersed
Bda12g00562 Bda-Chr12:9654647 Bda05g00496 Bda-Chr5:51751997 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00496 K16075 - zju:107406606 670.618