Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00523 ATGGCTCTGTTTGGGAGAGTCGGTGGTGGTATCTACACGAAGGCTGCAGATGTTGGTGCTGATCTGGTTGGAAAGGTTGAGAGAAATATTCCTGAAGATGACCCAAGAAACCCAGCTGTCATTGCTGATAACGTTGGTGATAATGTTGGTGATATTGCCGGAATGGGATCTGATCTTTTCGGCTCATATGCTGAGTCATCTTGTGCTGCTCTTGTTGTTGCTTCCATATCTTCTTTCGGAATCGACCACGACTTTACTGCAATGTGCTATCCTCTTCTCATAAGCTCAATGGGTATCCTTGTTTGTTTGATCACAACTCTCTTTGCCACCGACTTTTTTGAGATCAAGGCTGTTAAAGAAATCGAGCCAGCACTAAAGAAGCAGCTTATCATTTCCACTGTTATTATGACTTTGGGAATTGCTGTCATTAGCTTGATTGCTCTACCATCTTCCTTCACAATTTTCAATTTTGGTACCCAGAAAGTTGTCAAGAACTGGCAACTTTTCTTGTGTGTGGGCGTCGGTCTTTGGGCTGGACTTATTATTGGTTTTGTAACCGAGTATTATACTAGCAATGCTTACAGCCCCGTGCAAGATGTTGCAGATTCTTGCAGAACAGGGGCAGCCACTAACGTAATCTTTGGACTTGCTCTGGGATACAAGTCCGTTATAATTCCCATTTTTGCCATTGCTGTCAGTATTTTTGTGAGTTTTAGTTTTGCTGCTATGTATGGCATTGCTGTGGCGGCTCTTGGAATGCTGAGCACTATTGCTACTGGACTGGCCATTGATGCTTATGGACCTATCAGTGACAATGCTGGAGGCATTGCTGAAATGGCAGGCATGAGTCATCGAATTCGTGAGAGAACTGATGCTCTTGATGCTGCTGGAAACACCACTGCTGCTATTGGAAAGGGCTTTGCCATTGGATCAGCGGCACTAGTGTCCTTGGCCTTATTTGGTGCCTTTGTCAGCAGAGCTTCAATTTCATCTGTTGATGTCTTGACCCCGAAAGTATTCATCGGATTGATTGTCGGAGCCATGCTTCCCTACTGGTTTTCTGCAATGACCATGAAAAGTGTTGGAAGTGCCGCTCTGAAAATGGTGGAGGAAGTTCGCCGACAGTTCAACACTATACCAGGTCTGATGGAAGGACTTGCCAAACCAGATTACGCCACTTGTGTTAAGATATCCACCGATGCCTCCATCAAGGAGATGATTCCTCCGGGTGCCCTTGTCATGCTCACACCCCTCATTGTCGGGACCTTCTTTGGCGTTGAAACCCTGTCTGGCGTCCTAGCCGGCTCTCTAGTTTCAGGCGTGCAGATAGCAATATCTGCTTCTAACACTGGTGGTGCATGGGACAATGCCAAGAAATACATTGAGGCCGGTGCTTCGGAGCATGCAAGGAACTCTCGGGCCTAA 1425 46.32 MALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGIDHDFTAMCYPLLISSMGILVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVIMTLGIAVISLIALPSSFTIFNFGTQKVVKNWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASISSVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGLAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARNSRA 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 52717163 52719583 - Bda021634.1 Bda05g00523 6835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00523 474 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 1 471 - -
Bda05g00523 474 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 471 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda05g00523 474 Pfam Inorganic H+ pyrophosphatase 1 472 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Bda05g00523 474 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 1 471 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00523 Bda-Chr5:52717163 Bda09g01037 Bda-Chr9:40552662 0 dispersed
Bda05g00523 Bda-Chr5:52717163 Bda02g00192 Bda-Chr2:36524075 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00523 K23025 - vvi:100256710 895.575