Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g00554 | ATGAAGACAGTGTATAGGGCATTTGATGAGGTGCTTGGAATGGAGGTGGCTTGGAATCAGGTTAAGCTCAAAGAGGTCTTCCACTCGCCAGATTTATTGCAGAGGCTTTACTCTGAAGTACACCTCCTCAAAAACCTCAATCATTGCTCTATCATCCGCTTCCATACCCACTGGATCGATATCAATTCTAGATCCTTCAACTTCATCACCGAAATGTTCACCTCCGGCACCCTTAGAGAATATAGACGGAAATATCAACAAGTGGATATAAGGGCAGTGAAGAACTGGGCCCGTCAGATTCTATGCGGTTTGGCTTATCTTCATGAGCATGATCCTCCGGTGATCCATCGAGACCTCAAATGTGACAACATATTCGTCAATGGCCATCTCGGACAAGTCAAAATTGGCGATTTGGGTTTGGCTGCAATTCTTCAAGAATCCCAGCGAGCTCACAGTACTCCGGAATTTATGGCCCCGGAGCTATACGAAGAGGAATACAATGAGCTTGTTGATATATACTCGTTTGGAATGTGTGTCCTAGAGATGCTGACTTCAGAGTACCCTTACAGCGAGTGCTCTAACCCTGCCCAAATCTACAAAAAGGTCACCGCGGGAAATTGCCCCAAGCATTCCTACCGAATTCAAGATAAGGAACTGCAGCAATTCGTGACTCCCAGTGGAACAGTAATGGGGGCTCCTCCATTGAGAAGCAAGGACATGACCATCACTGGAACGATGAATTCAGAAGATGAGACAGTCAATCGAATAACATTACTTTCCGTTGACATCGTGAAAGATACTGCAATTGATGTGGCAAATGAGATGGTAAAAGAGCTGGAAATTTGTGGGTGGGAGCCAATGGAAATATCGAAGATGATAGAGGAGCAAATCACTTCTCTACTTCCTGGTTGGAAGCAGTTTGGTTCTCCACAATTTCATGATCAGCTCAGTTTCAATTACAAGAAGAAGAAGAAGATGTTAACATCACACCCTGCCTGTTATACTCAGATTCCTTGTGCTCGTCCTCCTCGTCTTCTCTCCCACCTCTCAACCCCTCGCACGAAACCCAGGATTTGCACGGACTGGGGGCGATTTCTAGCCATAACTGCTGGCTTCAAGGTACTTTCTCATATTTTGTTAAGCAGTCTTTTTTTTGCATCTTTTAACACATTAAAAAGCTCATTCTTCTTTGCAACTAATATGATTGAGATGGTGTTACATAAGAACGTATGA | 1233 | 44.12 | MKTVYRAFDEVLGMEVAWNQVKLKEVFHSPDLLQRLYSEVHLLKNLNHCSIIRFHTHWIDINSRSFNFITEMFTSGTLREYRRKYQQVDIRAVKNWARQILCGLAYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILQESQRAHSTPEFMAPELYEEEYNELVDIYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTAGNCPKHSYRIQDKELQQFVTPSGTVMGAPPLRSKDMTITGTMNSEDETVNRITLLSVDIVKDTAIDVANEMVKELEICGWEPMEISKMIEEQITSLLPGWKQFGSPQFHDQLSFNYKKKKKMLTSHPACYTQIPCARPPRLLSHLSTPRTKPRICTDWGRFLAITAGFKVLSHILLSSLFFASFNTLKSSFFFATNMIEMVLHKNV | 410 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 53426529 | 53428257 | - | Bda021677.1 | Bda05g00554 | 6866 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g00554 | 410 | Pfam | Protein kinase domain | 3 | 204 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda05g00554 | 410 | SMART | serkin_6 | 3 | 241 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda05g00554 | 410 | ProSiteProfiles | Protein kinase domain profile. | 1 | 269 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda05g00554 | 410 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 223 | IPR011009 | - | |
Bda05g00554 | 410 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 71 | - | - | |
Bda05g00554 | 410 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED | 1 | 224 | - | - | |
Bda05g00554 | 410 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED | 232 | 324 | - | - | |
Bda05g00554 | 410 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 114 | 126 | IPR008271 | GO:0004672|GO:0006468 | |
Bda05g00554 | 410 | Gene3D | Transferase(Phosphotransferase) domain 1 | 73 | 226 | - | - | |
Bda05g00554 | 410 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 1 | 224 | - | - | |
Bda05g00554 | 410 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 232 | 324 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g01439 | Bda-Chr3:51799784 | Bda05g00554 | Bda-Chr5:53426529 | 0 | dispersed | |
Bda05g00554 | Bda-Chr5:53426529 | Bda09g01550 | Bda-Chr9:47104972 | 6.55E-148 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69628 | PF00069 | Pkinase | 3.30E-39 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g00554 | K08867 | - | jre:108999446 | 467.618 |