Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00570 ATGGGCGTGGACATGTCGAATAATCAACCGACTTCACGAACCAAAGACTTTTTTGCCTCTCCTGCTCTCTCTCTCAGCCTTGCCGGGATTTTTCGTGATGCCGGAGGGACGGCTGCAGCGGCCAGTGTGGAGGTGGAGGAAGGAGACGAGGAGAGCGGGGGAGGAGGCCGTAGAGAAGATACGGTGGAGATTAGTAGTGAGAATTCGGGTCCCGGTAGATCAAGGTCGGAAGGTGAATTTGATCCTGAGGGAGAACATGATGACGAGGATGAAGATGGAGACAAGAATAAGAAGAAGAAAAGGAAGAAGTACCATAGGCATACAGCAGAGCAAATCCGAGAAATGGAAGCGCTATTCAAAGAGTCGCCTCATCCAGATGAGAAGCAGAGGCAGCAGCTGAGCAAGCAATTAGGCTTAGCTCCAAGACAAGTCAAATTCTGGTTCCAAAATCGAAGAACACAAATCAAAGCGATTCAAGAGCGCCACGAAAACACGTTACTGAAAACGGAGATGGAGAAGCTGAGAGACGAAAATAAATCGATGAGAGAGTCGATAAACCGATCCTCTTGTCCTAATTGCGGCACTGCAACTACTAGCAGAGACACTGCCTTGACTACTGAGGAGCAACAGCTTCGGCTCGAAAATGCGAAACTCAAAGCCGAGGTGGAAAAACTGAAGACTGCTCTCGGAAGATACCCTCCAGGGGGGACATCATCTCCGTCGTGTTCGGCCGGCAACGATCAAGAAAACCGAAGCTCCTTGGACTTCTACACTGGGATTTTCGGACTTGAGAAGTCGAGAATCATAGAAATAGTCAATCAAGCAATGGTCGAGCTAAAAAAGATGGCCACAGCCGGAGAACCACTTTGGATTCGGAGTGTCGAGACCGGGCGAGAAATACTAAATTATGACGAGTACATGAAGGAATTCTCCGTCGATAACTCCAGCAACGGTAGGCCCAAGCGATCCATCGAGGCCTCCAGAGAGACCGGAATTGTCTTCCTGGACCTATCGCGGCTAGTGCAGAGTTTCGTCGATGTGAATCAGTGGAAGGAAATGTTTCCTTTTATGATCTCAAAAGCCGCTACAGTCGACATTATCAGCCATGGCGAAGGTGCAAACAAGAATGGATCAGTTCAACTGATGTTTGCCGAGCTGCAAATGCTTACTCCGTTGGTGGGCACAAGAGAGGTCTACTTTATCAGATACTGCAAGCAGTTGAGCCCGGAACAGTGGGCAATTGTCGACGTCTCCATCGACAAAGTCGAAGATAACATTGATGCTTCGTTAGTGAAATGCCGGAAGCGTCCATCTGGTTGCATCATCGAAGATAAATCAAATGGTCACTGCAAGGTGATTTGGGTGGAGCATTTAGAGTGCCAGAAAAACACAGTTCATACCATGTACCGAACAGTCGTTAACAGCGGTTTGGCCTTTGGGGCGAGGCACTGGATGGCCACGCTCCAGCTGCAATGCGAGCGGCTCGTTTTTTTCATGGCCACCAACGTTCCCATGAAGGATTCTACAGGAGTTTCGACGCTGGCTGGGAGGAAAAGCATACTGAAGTTGGCTCAAAGAATGACATGTAGCTTTAGTCACGCCATTGGAGCCTCAAGCTTCAACACATGGAATAAGGTCTCAAGCAAGACAGGGGAAGACATAAGAATTGCTTCTAGAAAGAACTTGAACGACCCGGCTGAGCCTCTCGGGTTGATCTTATGCGCAGTTTCATCTGTCTGGCTTCCCGTCTCCCCTCTCGTTCTGTTTGATTTCTTACGAGACGAAACTCACCGGAGCGAGTGGGACATCATCTTCACCGGAGGCCAGGCACAATCCATCGCTAACTTATCCAAAGGCCAAGATCGAGGCAATGCAGTTGCTATCCAAACGATAAAATCGAAAGAGAATAGCATGTGGATACTCCAAGACAGCTGCACAAACACATTCGAATCCTTGGTGGTCTATGCTCAAGTAGACATCACAGGCATGCAGTCAGTAATGACAGGCTGCGACTCTAGCAGCATCGCAGTGTTGCCTTCCGGTTTCTCGATTCTCCCGGACGGGCTCGAATCGAGACCTCTAGTCATTACGTCGAGGAAAGAGGAGAAGAGTTCAGAAGGAGGATCTTTGCTCACAATAGCATTCCAAATCCTCACCAACACCTCTCCTACTGCGAAACTAACGATGGAGTCGGTCGAGTACGTCAACAACGTCATCTCATGTACTCTGAGAAATATCAGAACAAGCTTGCAGTGCGAAGATGGG 2265 48.92 MGVDMSNNQPTSRTKDFFASPALSLSLAGIFRDAGGTAAAASVEVEEGDEESGGGGRREDTVEISSENSGPGRSRSEGEFDPEGEHDDEDEDGDKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENTLLKTEMEKLRDENKSMRESINRSSCPNCGTATTSRDTALTTEEQQLRLENAKLKAEVEKLKTALGRYPPGGTSSPSCSAGNDQENRSSLDFYTGIFGLEKSRIIEIVNQAMVELKKMATAGEPLWIRSVETGREILNYDEYMKEFSVDNSSNGRPKRSIEASRETGIVFLDLSRLVQSFVDVNQWKEMFPFMISKAATVDIISHGEGANKNGSVQLMFAELQMLTPLVGTREVYFIRYCKQLSPEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKNTVHTMYRTVVNSGLAFGARHWMATLQLQCERLVFFMATNVPMKDSTGVSTLAGRKSILKLAQRMTCSFSHAIGASSFNTWNKVSSKTGEDIRIASRKNLNDPAEPLGLILCAVSSVWLPVSPLVLFDFLRDETHRSEWDIIFTGGQAQSIANLSKGQDRGNAVAIQTIKSKENSMWILQDSCTNTFESLVVYAQVDITGMQSVMTGCDSSSIAVLPSGFSILPDGLESRPLVITSRKEEKSSEGGSLLTIAFQILTNTSPTAKLTMESVEYVNNVISCTLRNIRTSLQCEDG 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 53579833 53583110 - Bda033643 Bda05g00570 6882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00570 755 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 16 752 IPR042160 -
Bda05g00570 755 Coils Coil 157 184 - -
Bda05g00570 755 MobiDBLite consensus disorder prediction 184 202 - -
Bda05g00570 755 SUPERFAMILY Bet v1-like 263 494 - -
Bda05g00570 755 Pfam START domain 271 494 IPR002913 GO:0008289
Bda05g00570 755 SUPERFAMILY Homeodomain-like 90 159 IPR009057 -
Bda05g00570 755 MobiDBLite consensus disorder prediction 228 248 - -
Bda05g00570 755 CDD START_ArGLABRA2_like 265 493 - -
Bda05g00570 755 MobiDBLite consensus disorder prediction 234 248 - -
Bda05g00570 755 Gene3D - 86 171 - -
Bda05g00570 755 ProSitePatterns 'Homeobox' domain signature. 133 156 IPR017970 GO:0000981|GO:0006355
Bda05g00570 755 ProSiteProfiles 'Homeobox' domain profile. 98 158 IPR001356 GO:0003677
Bda05g00570 755 ProSiteProfiles START domain profile. 261 497 IPR002913 GO:0008289
Bda05g00570 755 SMART HOX_1 100 162 IPR001356 GO:0003677
Bda05g00570 755 Pfam Homeodomain 101 156 IPR001356 GO:0003677
Bda05g00570 755 SUPERFAMILY Bet v1-like 538 742 - -
Bda05g00570 755 Coils Coil 208 228 - -
Bda05g00570 755 Gene3D - 271 489 IPR023393 -
Bda05g00570 755 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 16 752 - -
Bda05g00570 755 MobiDBLite consensus disorder prediction 182 202 - -
Bda05g00570 755 MobiDBLite consensus disorder prediction 35 109 - -
Bda05g00570 755 CDD homeodomain 105 156 IPR001356 GO:0003677
Bda05g00570 755 SMART START_1 270 494 IPR002913 GO:0008289
Bda05g00570 755 MobiDBLite consensus disorder prediction 50 64 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00570 Bda10g00831 CCT
Bda05g00570 Bda10g00831 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00570 Bda-Chr5:53579833 Bda13g00333 Bda-Chr13:4230213 0 dispersed
Bda11g00826 Bda-Chr11:8184574 Bda05g00570 Bda-Chr5:53579833 1.39E-23 dispersed
Bda10g00831 Bda-Chr10:42695627 Bda05g00570 Bda-Chr5:53579833 4.33E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15886 PF01852 START 5.80E-55 CL0209 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00570 K09338 - qsu:111988083 1234.94