Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00593 ATGAAGCTGAGTCACCTGATGAAGGTGCCTTTCTCGTTGCAGCAAGAGAATTTGGTTTTGAACTTTGTAAAAGAACTCAAACAAGCTTGGTTGTCCGTGAAAGATACTTGTACTTCCAAACAAGCAGTTGAGAGGGAGTACAAAATTCTTAACCTCTTGGATTTCACCAGTACGAGGAAGCGAATGACTGTTATTGTGCGGGACGAAGATGGGCAGATTCTTCTTTTTTGCAAAGGGGCTGACAGCATCATTTTTGATCGATTAGCAAAGAACGGACGAATGTACCAAGATGTAACCACTAAGCATTTGAATGAGTATGGAGAAGCTGGGTTGAGGACACTAGCTCTAGCTTACAGAAAACTGGATGAATCAGAGTACTCTGCTTGGAACAATGAATTTCTGAAAGCCAAAACATCAATTGGTGGTGATAGGGATGCAATGCTTGAGCAGGTATCAGATATGATCGAAAGGGAGTTGATTCTAGTTGGTGCCACAGCTGTGGAGGATAAGTTGCAAAAAGGGGTCCCCCAGTGTATAGATAAACTCGCTCAAGCTGGCCTCAAGATCTGGGTTTTGACAGGGGACAAGATGGAAACTGCTATCAATATTGGCTTTGCTTGCAGTTTGCTAAGACAGGGCATGAAGCAGATACGTATAACCACTAATTCAGACATATTAGCTCAGGAGGGCAATGAGGCAGTGAAAGCAAACATTTTAAACCAAATCACCAATGCCTCACAAACGATCAAGCTGGAGAAGGATCCGCATGCTGCATTTGCTTTAATTATTGATGGGAAGACCTTAACCTATGCTTTGGAAAATGATATGAAGCATAAATTTCTGAGATTGGCCGTTGATTGTGCTTCTGTTATTTGTTGTCGTGTATCTCCTAAGCAGAAGGCGTTGGTAACTAGGTTAGTGAAAGAAGGTACAGGGAGAACCACCTTGGCGATTGGTGATGGTGCAAACGATGTTGGAATGATCCAAGAGGCTGATATTGGCGTCGGGATTAGTGGTGTAGAAGGTATGCAGGCAGTGATGGCTAGCGACTTTTCCATCGCTCAGTTCCGGTTTTTGGAGAGACTTCTTGTTGTCCATGGACATTGGTGCTACAAGAGGATTGCCCAGATGATTTGCTATTTCTTCTACAAGAATATAGCATTTGGACTTACCCTCTTCTACTTCGAGGCATTCACCGGGTTTTCTGGGCAATCAATTTACGACGACTATTATATGCTTTCGTTTAATGCGATTCTTACCTCATTGCCTGTCATCTCACTTGGAGTTTTCGAACAAGACGTTCCATCCGAGGTCTGCCTACAGTTCCCTGCACTGTATCAACAAGGACCGAAAAACTTGTTCTTCGACTGGCCTAGAATATTCGGGTGGATGGGAAACGGTCTTTATTCCTCTCTCATCACTTTCTTCCTCAACATAATCATCTTCTACTATCAAGCTTTTCGAGCTGAAGGCCAGACTGCGGACATAGCAGCCGTGGGCACGACAATGTTCACTTGCATAATCTGGGCTGTAAATTGCCAAATCGCTCTCACAATGAGCCACTTCACGTGGATCCAACACCTTCTCATCTGGGGCAGCATCGGCATGTGGTATCTCTTCATCTTGCTCTACGGCACCATGATCATCTCCGGAAATGCCTACAAAATTCTGGTTGAGGCTCTGGCTCCGGCCCCTGTCTTCTGGACCACAACTTTATTGGTAACAATCGCTTGTAATCTCCCTTACTTTGCCCACATTTCCTACCAGAGATGTTTCAACCCAATGGATCATCATATCATCCAAGAAATCAAATATTACAAGAAAGACGTGCAAGATCAGATAATGTGGACCCGTGAAAGTTCAAAAGCACGGCAAGAAACAAAGATTGGATTTACAGCACGGGTCGACGCAAAGATCCGGCAGTTGAGGGGGAGGCTGCAGAAGAAGCACTCGACTTTGAGCGTATAA 1968 44.36 MKLSHLMKVPFSLQQENLVLNFVKELKQAWLSVKDTCTSKQAVEREYKILNLLDFTSTRKRMTVIVRDEDGQILLFCKGADSIIFDRLAKNGRMYQDVTTKHLNEYGEAGLRTLALAYRKLDESEYSAWNNEFLKAKTSIGGDRDAMLEQVSDMIERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIRITTNSDILAQEGNEAVKANILNQITNASQTIKLEKDPHAAFALIIDGKTLTYALENDMKHKFLRLAVDCASVICCRVSPKQKALVTRLVKEGTGRTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSIYDDYYMLSFNAILTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWPRIFGWMGNGLYSSLITFFLNIIIFYYQAFRAEGQTADIAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLLIWGSIGMWYLFILLYGTMIISGNAYKILVEALAPAPVFWTTTLLVTIACNLPYFAHISYQRCFNPMDHHIIQEIKYYKKDVQDQIMWTRESSKARQETKIGFTARVDAKIRQLRGRLQKKHSTLSV 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54002479 54005414 + Bda021716.1 Bda05g00593 6905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00593 655 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 290 399 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g00593 655 Pfam Phospholipid-translocating P-type ATPase C-terminal 346 594 IPR032630 -
Bda05g00593 655 Pfam Cation transport ATPase (P-type) 20 88 - -
Bda05g00593 655 Gene3D - 162 358 IPR023214 -
Bda05g00593 655 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 38 175 IPR023299 GO:0000166
Bda05g00593 655 Gene3D - 17 161 IPR023299 GO:0000166
Bda05g00593 655 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 39 602 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bda05g00593 655 SUPERFAMILY HAD-like 155 366 IPR036412 -
Bda05g00593 655 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 34 654 - -
Bda05g00593 655 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 34 654 - -
Bda05g00593 655 SUPERFAMILY Calcium ATPase, transmembrane domain M 367 586 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00593 Bda-Chr5:54002479 Bda10g01110 Bda-Chr10:45111761 0 dispersed
Bda11g01401 Bda-Chr11:17881287 Bda05g00593 Bda-Chr5:54002479 1.36E-11 dispersed
Bda05g00593 Bda-Chr5:54002479 Bda07g01516 Bda-Chr7:28211401 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00593 K01530 - csv:101221220 1102.04