Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g00593 | ATGAAGCTGAGTCACCTGATGAAGGTGCCTTTCTCGTTGCAGCAAGAGAATTTGGTTTTGAACTTTGTAAAAGAACTCAAACAAGCTTGGTTGTCCGTGAAAGATACTTGTACTTCCAAACAAGCAGTTGAGAGGGAGTACAAAATTCTTAACCTCTTGGATTTCACCAGTACGAGGAAGCGAATGACTGTTATTGTGCGGGACGAAGATGGGCAGATTCTTCTTTTTTGCAAAGGGGCTGACAGCATCATTTTTGATCGATTAGCAAAGAACGGACGAATGTACCAAGATGTAACCACTAAGCATTTGAATGAGTATGGAGAAGCTGGGTTGAGGACACTAGCTCTAGCTTACAGAAAACTGGATGAATCAGAGTACTCTGCTTGGAACAATGAATTTCTGAAAGCCAAAACATCAATTGGTGGTGATAGGGATGCAATGCTTGAGCAGGTATCAGATATGATCGAAAGGGAGTTGATTCTAGTTGGTGCCACAGCTGTGGAGGATAAGTTGCAAAAAGGGGTCCCCCAGTGTATAGATAAACTCGCTCAAGCTGGCCTCAAGATCTGGGTTTTGACAGGGGACAAGATGGAAACTGCTATCAATATTGGCTTTGCTTGCAGTTTGCTAAGACAGGGCATGAAGCAGATACGTATAACCACTAATTCAGACATATTAGCTCAGGAGGGCAATGAGGCAGTGAAAGCAAACATTTTAAACCAAATCACCAATGCCTCACAAACGATCAAGCTGGAGAAGGATCCGCATGCTGCATTTGCTTTAATTATTGATGGGAAGACCTTAACCTATGCTTTGGAAAATGATATGAAGCATAAATTTCTGAGATTGGCCGTTGATTGTGCTTCTGTTATTTGTTGTCGTGTATCTCCTAAGCAGAAGGCGTTGGTAACTAGGTTAGTGAAAGAAGGTACAGGGAGAACCACCTTGGCGATTGGTGATGGTGCAAACGATGTTGGAATGATCCAAGAGGCTGATATTGGCGTCGGGATTAGTGGTGTAGAAGGTATGCAGGCAGTGATGGCTAGCGACTTTTCCATCGCTCAGTTCCGGTTTTTGGAGAGACTTCTTGTTGTCCATGGACATTGGTGCTACAAGAGGATTGCCCAGATGATTTGCTATTTCTTCTACAAGAATATAGCATTTGGACTTACCCTCTTCTACTTCGAGGCATTCACCGGGTTTTCTGGGCAATCAATTTACGACGACTATTATATGCTTTCGTTTAATGCGATTCTTACCTCATTGCCTGTCATCTCACTTGGAGTTTTCGAACAAGACGTTCCATCCGAGGTCTGCCTACAGTTCCCTGCACTGTATCAACAAGGACCGAAAAACTTGTTCTTCGACTGGCCTAGAATATTCGGGTGGATGGGAAACGGTCTTTATTCCTCTCTCATCACTTTCTTCCTCAACATAATCATCTTCTACTATCAAGCTTTTCGAGCTGAAGGCCAGACTGCGGACATAGCAGCCGTGGGCACGACAATGTTCACTTGCATAATCTGGGCTGTAAATTGCCAAATCGCTCTCACAATGAGCCACTTCACGTGGATCCAACACCTTCTCATCTGGGGCAGCATCGGCATGTGGTATCTCTTCATCTTGCTCTACGGCACCATGATCATCTCCGGAAATGCCTACAAAATTCTGGTTGAGGCTCTGGCTCCGGCCCCTGTCTTCTGGACCACAACTTTATTGGTAACAATCGCTTGTAATCTCCCTTACTTTGCCCACATTTCCTACCAGAGATGTTTCAACCCAATGGATCATCATATCATCCAAGAAATCAAATATTACAAGAAAGACGTGCAAGATCAGATAATGTGGACCCGTGAAAGTTCAAAAGCACGGCAAGAAACAAAGATTGGATTTACAGCACGGGTCGACGCAAAGATCCGGCAGTTGAGGGGGAGGCTGCAGAAGAAGCACTCGACTTTGAGCGTATAA | 1968 | 44.36 | MKLSHLMKVPFSLQQENLVLNFVKELKQAWLSVKDTCTSKQAVEREYKILNLLDFTSTRKRMTVIVRDEDGQILLFCKGADSIIFDRLAKNGRMYQDVTTKHLNEYGEAGLRTLALAYRKLDESEYSAWNNEFLKAKTSIGGDRDAMLEQVSDMIERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQIRITTNSDILAQEGNEAVKANILNQITNASQTIKLEKDPHAAFALIIDGKTLTYALENDMKHKFLRLAVDCASVICCRVSPKQKALVTRLVKEGTGRTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSIYDDYYMLSFNAILTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWPRIFGWMGNGLYSSLITFFLNIIIFYYQAFRAEGQTADIAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLLIWGSIGMWYLFILLYGTMIISGNAYKILVEALAPAPVFWTTTLLVTIACNLPYFAHISYQRCFNPMDHHIIQEIKYYKKDVQDQIMWTRESSKARQETKIGFTARVDAKIRQLRGRLQKKHSTLSV | 655 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 54002479 | 54005414 | + | Bda021716.1 | Bda05g00593 | 6905 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g00593 | 655 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 290 | 399 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda05g00593 | 655 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 346 | 594 | IPR032630 | - | |
Bda05g00593 | 655 | Pfam | Cation transport ATPase (P-type) | 20 | 88 | - | - | |
Bda05g00593 | 655 | Gene3D | - | 162 | 358 | IPR023214 | - | |
Bda05g00593 | 655 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 38 | 175 | IPR023299 | GO:0000166 | |
Bda05g00593 | 655 | Gene3D | - | 17 | 161 | IPR023299 | GO:0000166 | |
Bda05g00593 | 655 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 39 | 602 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Bda05g00593 | 655 | SUPERFAMILY | HAD-like | 155 | 366 | IPR036412 | - | |
Bda05g00593 | 655 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 34 | 654 | - | - | |
Bda05g00593 | 655 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 34 | 654 | - | - | |
Bda05g00593 | 655 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 367 | 586 | IPR023298 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda05g00593 | Bda-Chr5:54002479 | Bda10g01110 | Bda-Chr10:45111761 | 0 | dispersed | |
Bda11g01401 | Bda-Chr11:17881287 | Bda05g00593 | Bda-Chr5:54002479 | 1.36E-11 | dispersed | |
Bda05g00593 | Bda-Chr5:54002479 | Bda07g01516 | Bda-Chr7:28211401 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g00593 | K01530 | - | csv:101221220 | 1102.04 |