Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00622 ATGGGTCTTCTTCTTCTCCTTCTCCTTCGTCTCTCCCTGCTGCTCTCACTTCTGCCGTCTTCTGTGTTTGCTTCTTCTTATACCCATGGGAGAGAAACCTTCATAGTTCAAGTACACAGAGACGCCAAACCCTCTGTTTTTCTTACCCATCGGCAATGGTACGATTCTACTTTGGCGTTCCTTCCGGCATCCTCAATCTCCGTTACTTCTGCTACCTCTGTAATCCACACCTACGATGTCATCTTTCATGGCTTTTCTGCAAAGCTCACTCCTTTCGAGGTAGAAAAGCTCCGAGACCTCTCCCACGTTATCTCCGTCATCCCCGAACAGGTTCGACATCTTCACACCACTCGTTCCCCTGAATTCCTCGGCCTGAAGACCACCGACAAGGCCGGGCTGCTCAGAGAGTCTGATTTTGGATCCGACCTAATTATCGGAGTTATTGACACTGGCATTTGGCCGGAGAGGCAGAGCTTCAGCGATCGCGATCTGGGTTCTATTCCTCCGAAGTGGAAGGGTGAGTGCGTCGCCGGAAAGGACTTCCCGGCGAGCTCTTGTAACCGCAAACTGATCGGAGCCAGGTATTTCTGCGATGGGTATGAAGCCACCAACGGAAAGATGAATGAGACCGCCGAGAATCGCTCTCCTAGAGACTCCGATGGGCACGGCACCCACACAGCCTCAATCGCCGCCGGAAGATACGTTTTTCCTGCTTCGATTATGGGATATGCACGGGGTGTGGCAGCCGGGATGGCTCCAAAAGCTCGTATTGCCACTTACAAAGTCTGCTGGAACTCCGGCTGCTACGACTCCGATATTCTCGCCGCCTTTGATTCCGCAGTATCAGATGGAGTTGACGTTATATCTCTTAGTGTTGGTGGCGTTGTGGTCCCTTATCACCTCGATGCGATCGCCATTGCGTCATTCAGAGCTGCAAATTCAGGCGTTTTCGTCTCGGCATCTGCCGGAAATGGCGGCCCAGGAGAACTCACGGTAACCAACATAGCGCCTTGGGTCACAACTGTCGGCGCCGGGACCATAGACAGGGATTTCCCAGCCGATGTAAGGCTAGGAAACGGGAAAATCTTACCCGGAGTGAGTGTCTACGATGGCCCTGGCTTCGATCCGGATCGGTTGTACCCGCTTATATACGCGGGCACCGAGGGCGGCGATGGCTACTCTTCATCGTTATGCTTAGAAGGTTCATTGGATCCAAACTCCGTAGCAGGTAAGATAGTTTTGTGCGACAGAGGAATCAGTTCAAGAGCTACAAAAGGAGCGGTCGTGAAGAAAGCAGGAGGAATCGGAATGATAATAGCAAACGGAGTGTTCGACGGCGAAGGGGTAATAGCCGACTGCCACTTGCTACCCGCAACAGCCGTGGGAGCATCCACCGGCGAAGAGATTAGGAAATATGTAGCGGCGATGGGGCCAAAATCCCAGTCTATGGCCACCGCAACGATTTTGTTCAAAGGAACAAAGCTCGGAGTGAAGCCGGCTCCGGTGGTAGCATCATTTTCGGCTCGAGGTCCGAACCCAGAGTCGCCTGAAATAATGAAGCCCGATCTTATCGCACCGGGGTTGAACATTCTAGGCGCTTGGCTCGACAAAGTCGGACCATCTGGAGTTCCTTCCGACGATCGAAGAACGGAGTTTAATATACTATCGGGCACTTCAATGGCTTGCCCTCATGTTTCTGGCCTAGCTGCTCTGTTAAAAGCTGCACATCCAGAATGGAGCCCATCTGCAATAAAATCCGCATTGATGACGACCGCTTGTACAGTCGATAACAGAGGAGAAACAATAGTGGACGAATCCACCGGCAATACTTCCACCGTTTTGGATTTCGGAGCAGGGCAAGTGAACCCACAAAAGGCCATGGATCCTGGTTTAGTCTACGACATAAGTTCATACGACTATATCGATTTCCTCTGCAATTCAAATTACACAGCCATGAACATTCAGGTAATTACAACCAAGAATTCAGATTGCAGCAGAGCAACAAAGGCCGGCCACGCCGGAAACTTGAATTACCCATCCATGTCAGTTGTGTTCCAGCAATATGGGAAGAAGAACATGTCGACCCACATGATCAGAACGGTGACCAACGTCGGCGACCCAAAATCGACTTATAGAGTGAGAATTGACCCACCAAGTGGAAGCACGGTAATAGTGGAGCCAGAGAAGCTGGCGTTCAGAAGAGTCGGACAAAAACTGAGCTTCCTAGTGAGAGTGGCAGCCATGGCAGTCAAGCTTTCTCCCGGAAGCTCTAGCATAAACAGCGGCTCGATAGTCTGGCACGACGGAAAACATTCAGTTAGAAGTCCATTGGTTGTCACGATGCAACAGCCACTGGATTCCTGA 2364 51.27 MGLLLLLLLRLSLLLSLLPSSVFASSYTHGRETFIVQVHRDAKPSVFLTHRQWYDSTLAFLPASSISVTSATSVIHTYDVIFHGFSAKLTPFEVEKLRDLSHVISVIPEQVRHLHTTRSPEFLGLKTTDKAGLLRESDFGSDLIIGVIDTGIWPERQSFSDRDLGSIPPKWKGECVAGKDFPASSCNRKLIGARYFCDGYEATNGKMNETAENRSPRDSDGHGTHTASIAAGRYVFPASIMGYARGVAAGMAPKARIATYKVCWNSGCYDSDILAAFDSAVSDGVDVISLSVGGVVVPYHLDAIAIASFRAANSGVFVSASAGNGGPGELTVTNIAPWVTTVGAGTIDRDFPADVRLGNGKILPGVSVYDGPGFDPDRLYPLIYAGTEGGDGYSSSLCLEGSLDPNSVAGKIVLCDRGISSRATKGAVVKKAGGIGMIIANGVFDGEGVIADCHLLPATAVGASTGEEIRKYVAAMGPKSQSMATATILFKGTKLGVKPAPVVASFSARGPNPESPEIMKPDLIAPGLNILGAWLDKVGPSGVPSDDRRTEFNILSGTSMACPHVSGLAALLKAAHPEWSPSAIKSALMTTACTVDNRGETIVDESTGNTSTVLDFGAGQVNPQKAMDPGLVYDISSYDYIDFLCNSNYTAMNIQVITTKNSDCSRATKAGHAGNLNYPSMSVVFQQYGKKNMSTHMIRTVTNVGDPKSTYRVRIDPPSGSTVIVEPEKLAFRRVGQKLSFLVRVAAMAVKLSPGSSSINSGSIVWHDGKHSVRSPLVVTMQQPLDS 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54285079 54287442 - Bda021747.1 Bda05g00622 6934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00622 787 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 8 785 - -
Bda05g00622 787 CDD Peptidases_S8_3 113 592 IPR034197 -
Bda05g00622 787 SUPERFAMILY PA domain 405 471 IPR046450 -
Bda05g00622 787 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 115 IPR037045 -
Bda05g00622 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Bda05g00622 787 Gene3D - 348 496 - -
Bda05g00622 787 CDD PA_subtilisin_like 354 488 - -
Bda05g00622 787 Pfam PA domain 381 469 IPR003137 -
Bda05g00622 787 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Bda05g00622 787 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Bda05g00622 787 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Bda05g00622 787 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 8 785 - -
Bda05g00622 787 Gene3D Peptidase S8/S53 domain 142 640 IPR036852 GO:0004252|GO:0006508
Bda05g00622 787 Pfam Fibronectin type-III domain 675 779 IPR041469 -
Bda05g00622 787 ProSiteProfiles Serine proteases, subtilase domain profile. 119 627 - -
Bda05g00622 787 Pfam Peptidase inhibitor I9 33 115 IPR010259 -
Bda05g00622 787 Pfam Subtilase family 140 608 IPR000209 GO:0006508|GO:0008236
Bda05g00622 787 Gene3D - 644 782 - -
Bda05g00622 787 SUPERFAMILY Subtilisin-like 114 631 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00622 Bda-Chr5:54285079 Bda11g01464 Bda-Chr11:20507518 0 dispersed
Bda10g00887 Bda-Chr10:43336039 Bda05g00622 Bda-Chr5:54285079 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00622 - - csv:101210434 1219.53