Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00628 ATGGCTGAAGATCTGGAGAGACCATTGCTCAATCCTGATAATTTCAACAGGGATAATATTGATTTGGAACGACTGCCCCTGGACGAAGTTTTCGAGCAACTCAGAACGTCGCCCCAGGGCCTTACCACTGCAGATGCCGAAGCTCGACAGTTAATATTTGGCATGAACAAACTCGAAGAAAAGCCGGAGAACAAATTTGTAAAATTTCTGGGATTCATGTGGAATCCACTGTCATGGGTCATGGAAGCTGCAGCAGTGATGGCCATTGCTCTTGCTAATGGTGGAGGTCAAGGTCCTGACTGGCAAGATTTTGTGGGTATCATTTGCCTGCTCTTGATCAACTCAACCATTAGTTTTATAGAAGAAAACAATGCTGGAAATGCAGCTGCAGCCCTCATGGCCCGTTTAGCTCCAAAAACAAAAGTTCTTAGAGATGGGCGGTGGCAAGAACAAGACGCGGCTGTTTTGGTACCCGGAGACATAATTAGCATCAAACTAGGAGATATCATCCCTGCAGATGCTCGTTTGCTCGAAGGAGATCCGCTGAAGATCGACCAGTCATCACTAACTGGAGAATCCTTACCGGTCACCAAGAGGACAGGTGATGAAGTATATTCTGGTTCTACTTGTAAGCATGGAGAGATTGAGGCTGTAGTTATTGCAACTGGAGTTCACTCGTTTTTCGGAAAGGCAGCTCACTTAGTTGACTCCACCATAGTTGTCGGACATTTTCAGAAGGTCCTTACCTCCATCGGAAATTTCTGCATTTGCTCTATAGCCGTGGGGATGATTCTTGAAATTATTGTCATGTTCCCTGTCCAGCACCGTACCTATCGAGACGGAATCAACAACCTCCTCGTTCTATTGATCGGCGGAATTCCCATCGCTATGCCGACAGTTTTGTCCGTGACACTTGCTATCGGCTCTCACCGGCTATCCCAACAGGGTGCCATTACAAAAAGGATGACTGCAATTGAAGAAATGGCCGGAATGGATGTCCTCTGCAGCGATAAAACAGGAACACTTACCCTGAATCGCCTCTCTGTAGACAAAAATCTCGTCGAGGTTTTTAACAAAGATATGGACAAAGACACAGTTGTCTTGTTTGCAGCTAGAGCATCAAGAATGGAGAATCAAGATGCTATTGATGCAGCCATTGTCAACATGCTTGGTGATCCAAAGGAGGCTCGAGCAAACATCAAGGAAGTGCATTTTCTGCCTTTCAATCCGGTCGATAAACGTACTGCTATTACCTACGTCGACTCAGATGGTAATTGGCATCGTACCACCAAAGGCGCCCCCGAACAGATTCTAAATCTATGCAAAGAGAGAGATGAGATTAAGGGAAAAGTGCTCTCCATCATAGACAAATTTGCTGAAAGGGGTTTGCGATCACTTGGAGTTGCATACCAGACCGTTCCGGAAAGAAGTAAGGAAAGCCTGGGAAGTGAGTGGACATTTTGCGGGTTGTTGCCTTTGTTCGATCCTCCGAGACATGATAGTGCAGAGACCATCCGCCGAGCACTTAACCTTGGAGTAGGCGTGAAGATGATTACCGGTGATCAGTTGGCCATCGCAAAGGAGACAGGCCGACGTCTTGGTATGGGAACAAATATGTATCCATCTTCTTCGTTGCTAGGTCGAGATAAAGATGAACATGAAGCTCTTCCGGTGGACGAGCTCATTGAGAAAGCAGATGGCTTCGCTGGAGTATTTCCAGAACACAAATACGAAATCGTTAGAATTTTGCAAGACAGAAAGCATGTAGTTGGAATGACGGGGGATGGTGTAAATGACGCACCTGCTTTGAAGAAAGCAGATATTGGTATAGCAGTGGCAGATGCTACAGATGCCGCAAGAAGTGCTGCAGATATAGTCTTAACTGAGCCTGGTCTAAGTGTCATTGTCAGTGCCGTCTTGACTAGCCGAGCAATTTTTCAAAGAATGAAGAATTATACAATATATGCCGTCTCAATCACCATTCGTATCGTGCTTGGTTTTGTGCTTCTAGCTTTGATATGGGAATTTGATTTCCCACCTTTCATGGTCCTGATCATCGCAATATTGAACGATGGAACCATCATGACTATTTCTAAAGATAGAGTCCGACCATCGCCAAGGCCAGATAGTTGGAAGCTCCCCGAGATCTTTGCTACAGGGATTGTCATCGGCACATATCTTGCTCTAGTTACCGTCCTATTCTACTGGTTGGTTGTGGGTACAGACTTCTTCGAGACCCGATTTCACGTAGATTCCTTGAAAAGTAACACCGAGAAAGTTGCCGCTGCTGTATATCTGCAAGTGAGCATCATCAGCCAGGCTCTCATATTCGTCACTCGTAGCCAAGGATGGTCATTTATGGAGAGGCCCGGAGTTCTCTTGATGTGTGCATTCGTGGTGGCTCAGCTGGTGGCTACCTTAATAGCAGTCTACGCAAATATAAGTTTCGCTTATATCAACGGTATCGGGTGGGGATGGGCCGGGGTCATCTGGCTCTACAGCTTCATCTTCTACTTGCCTCTCGATGTCATCAAGTTCACAATTCGCTACATCTTGAGTGGAGAAGCTTGGAATCTCTTATTTGACAGAAAGACACTGTTTACTTCGAAGAAGGACTACGGCAGTGAAGATAGGGCAGCTAAGTGGGTGCAGTCTCAAAGAAGTCTCCAAGGGTTAGGATCATCCGCAGATTTGGAGATCAATGGTCGGCGATCGACTTTAATCGCAGAACAGGCCAGGAGGCGAGCTGAAATAGCGAGGCTAGGAGAGATGCATACTCTGAAAGGACATATAGAATCTGTGGTGAGGCTTAAAAACTTGGACGTGGTAATTCAATCTGCTCATACAGTCTAA 2853 46.02 MAEDLERPLLNPDNFNRDNIDLERLPLDEVFEQLRTSPQGLTTADAEARQLIFGMNKLEEKPENKFVKFLGFMWNPLSWVMEAAAVMAIALANGGGQGPDWQDFVGIICLLLINSTISFIEENNAGNAAAALMARLAPKTKVLRDGRWQEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSSLTGESLPVTKRTGDEVYSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTIVVGHFQKVLTSIGNFCICSIAVGMILEIIVMFPVQHRTYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLSVDKNLVEVFNKDMDKDTVVLFAARASRMENQDAIDAAIVNMLGDPKEARANIKEVHFLPFNPVDKRTAITYVDSDGNWHRTTKGAPEQILNLCKERDEIKGKVLSIIDKFAERGLRSLGVAYQTVPERSKESLGSEWTFCGLLPLFDPPRHDSAETIRRALNLGVGVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRDKDEHEALPVDELIEKADGFAGVFPEHKYEIVRILQDRKHVVGMTGDGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEFDFPPFMVLIIAILNDGTIMTISKDRVRPSPRPDSWKLPEIFATGIVIGTYLALVTVLFYWLVVGTDFFETRFHVDSLKSNTEKVAAAVYLQVSIISQALIFVTRSQGWSFMERPGVLLMCAFVVAQLVATLIAVYANISFAYINGIGWGWAGVIWLYSFIFYLPLDVIKFTIRYILSGEAWNLLFDRKTLFTSKKDYGSEDRAAKWVQSQRSLQGLGSSADLEINGRRSTLIAEQARRRAEIARLGEMHTLKGHIESVVRLKNLDVVIQSAHTV 950
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54373102 54378193 + Bda021752.1 Bda05g00628 6940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00628 950 CDD P-type_ATPase_H 40 846 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda05g00628 950 Gene3D - 138 222 - -
Bda05g00628 950 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 40 811 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda05g00628 950 Pfam E1-E2 ATPase 136 314 - -
Bda05g00628 950 Gene3D - 347 494 IPR023299 GO:0000166
Bda05g00628 950 PRINTS P-type cation-transporting ATPase superfamily signature 489 500 - -
Bda05g00628 950 PRINTS P-type cation-transporting ATPase superfamily signature 616 628 - -
Bda05g00628 950 PRINTS P-type cation-transporting ATPase superfamily signature 511 521 - -
Bda05g00628 950 PRINTS P-type cation-transporting ATPase superfamily signature 593 612 - -
Bda05g00628 950 PRINTS P-type cation-transporting ATPase superfamily signature 185 199 - -
Bda05g00628 950 PRINTS P-type cation-transporting ATPase superfamily signature 335 349 - -
Bda05g00628 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 368 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g00628 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 568 680 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g00628 950 SUPERFAMILY Calcium ATPase, transduction domain A 138 235 IPR008250 -
Bda05g00628 950 Gene3D - 100 820 - -
Bda05g00628 950 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 931 - -
Bda05g00628 950 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Bda05g00628 950 SFLD p-type atpase 317 645 IPR044492 -
Bda05g00628 950 SUPERFAMILY HAD-like 331 640 IPR036412 -
Bda05g00628 950 PRINTS H+-transporting ATPase (proton pump) signature 565 581 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g00628 950 PRINTS H+-transporting ATPase (proton pump) signature 451 469 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g00628 950 PRINTS H+-transporting ATPase (proton pump) signature 624 649 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g00628 950 PRINTS H+-transporting ATPase (proton pump) signature 593 609 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g00628 950 PRINTS H+-transporting ATPase (proton pump) signature 765 786 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda05g00628 950 ProSitePatterns E1-E2 ATPases phosphorylation site. 337 343 IPR018303 -
Bda05g00628 950 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 852 IPR023298 -
Bda05g00628 950 Pfam haloacid dehalogenase-like hydrolase 331 607 - -
Bda05g00628 950 Gene3D - 332 630 IPR023214 -
Bda05g00628 950 SFLD Haloacid Dehalogenase 317 645 - -
Bda05g00628 950 Pfam Cation transporter/ATPase, N-terminus 24 87 IPR004014 -
Bda05g00628 950 Gene3D - 904 950 - -
Bda05g00628 950 PANTHER CALCIUM-TRANSPORTING ATPASE 1 931 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00628 Bda12g01038 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00628 Bda-Chr5:54373102 Bda11g01685 Bda-Chr11:50986235 0 dispersed
Bda14g01332 Bda-Chr14:15046308 Bda05g00628 Bda-Chr5:54373102 7.48E-53 transposed
Bda12g01038 Bda-Chr12:42144994 Bda05g00628 Bda-Chr5:54373102 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00628 K01535 - jre:108983058 1640.94