Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda05g00637 | ATGGAACAAGCAGAGCAATCGAAGAAGCCGGAGAACGGAAAGCTTACATTCGTGATGGACGACCGCGAGAGATTTGATCTGCACGATCTGCTCCGGGCGTCTGCAGAAGTTTTGGGGAGTGGGACATTTGGATCGTCTTACAAAGCCACCATACTGTGCGATGCTGTGGCGGTGAAGAGGTATAAACAGATACTGAACAGCGTCGGAAGGGAGGAGTTTTACGAGCACATGAGGAGGCTGGGCAGACTGCGGCATCCGAACTTGCTTCCCATAGTTGCCTACCATTATAGGAAAGAAGAGAAGCTCTTGATTTCTGACTTCGTGGACAATGGTAGTCTGGCCAGTCATATTCACGGAAAGCGGAATGAGGCGCAACCAGGCCTGGATTGGGTAACCCGGCTGAGGATAATCAAAGGCATAGCCAGGGGATTATCGTACCTCTACAGCAGCGCGCCGCCGAGCATAACAGTAGCGCACGGCCATCTGAAATCATCCAACGTGCTGCTAGACGACGCAATGGAACCCCTATTGACAGACTACGGTCTCCTTCCCATTGTGAACAATGAACACTCCCATCAGCCTCATGATGGCCTACAAATCGCCGGAGTTCGCCCGACAGGGCCGCATAACCAGAAAAACCGACGTGTGGTGTCTGGGAGTAGTGATACTGGAGGTATTAACGGGAAAATTTCCGGAGAACTATTTGACGGAGAGCTACGAAAGGGGGTCAGATATAGGGGAATGGGTGAATGA | 753 | 51.66 | MEQAEQSKKPENGKLTFVMDDRERFDLHDLLRASAEVLGSGTFGSSYKATILCDAVAVKRYKQILNSVGREEFYEHMRRLGRLRHPNLLPIVAYHYRKEEKLLISDFVDNGSLASHIHGKRNEAQPGLDWVTRLRIIKGIARGLSYLYSSAPPSITVAHGHLKSSNVLLDDAMEPLLTDYGLLPIVNNEHSHQPHDGLQIAGVRPTGPHNQKNRRVVSGSSDTGGINGKISGELFDGELRKGVRYRGMGE | 250 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 54546353 | 54547224 | - | Bda021760.1 | Bda05g00637 | 6949 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda05g00637 | 250 | Pfam | Protein tyrosine and serine/threonine kinase | 36 | 194 | IPR001245 | GO:0004672|GO:0006468 | |
| Bda05g00637 | 250 | PANTHER | POLLEN RECEPTOR-LIKE KINASE 5 | 5 | 193 | - | - | |
| Bda05g00637 | 250 | Gene3D | Transferase(Phosphotransferase) domain 1 | 18 | 209 | - | - | |
| Bda05g00637 | 250 | ProSiteProfiles | Protein kinase domain profile. | 32 | 250 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bda05g00637 | 250 | SMART | tyrkin_6 | 32 | 243 | IPR020635 | GO:0004713|GO:0006468 | |
| Bda05g00637 | 250 | SUPERFAMILY | Protein kinase-like (PK-like) | 36 | 192 | IPR011009 | - | |
| Bda05g00637 | 250 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 5 | 193 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda05g00637 | Bda-Chr5:54546353 | Bda14g00946 | Bda-Chr14:7599154 | 7.11E-42 | dispersed | |
| Bda05g00637 | Bda-Chr5:54546353 | Bda11g01808 | Bda-Chr11:53163949 | 2.75E-42 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 69631 | PF07714 | PK_Tyr_Ser-Thr | 8.90E-19 | CL0016 | Bda | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda05g00637 | - | - | csv:101203276 | 281.567 |