Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00641 ATGGCTGCCTCTTCCCTCTCGCATCTATCCTTAACTACCATAGATGCCAACCTTCACAGAACCGAATCTGGATTTCTGGGTGTTTCAAAGCATTCTCATTTTCTTCACTCTACTGCTGCTTCTAGTCGGTTTTCCAGCTCTAACTCAAAATTATCTACTGTCAGATGCCAGTCAACCAGCACTGATGAGCCAAAGACAAAAAGAAATCTATTGGACAATGCAAGCAATCTTCTCACCAATTTGTTAAGTGGTGGAAATCTAGGATCTATGCCCATAGCCGAAGGTGCAGTTTCCGATTTGTTTGGTCGCCCACTCTTCTTTTCACTATTTGATTGGTTCTTAGAGCATGGCTCTGTATACAAACTTGCATTTGGGCCAAAAGCATTTGTTGTTGTGTCTGATCCAATTGTTGCAAGACATATTCTTCGAGAAAATGCATTTTCCTACGACAAGGGAGTCCTTGCTGATATTCTAGAACCAATAATGGGCAAAGGGCTTATACCAGCTGACCTTGACACCTGGAAGCAGAGAAGAAGAGTGATCGCTCCTGGATTCCATTCGTTATACTTGGAAGCTATGGTTAAAGTATTTGCTGATTGCACAGAACGGTCAATACTGAAATTTCTTAAGCTTCTAAGAGGAATTGAACTATGCGAAGGAAAGATGATCGAGTTGGATCTTGAGGCAGAGTTTTCTAATTTGGCTCTTGATATTATTGGTCTTAGTGTTTTCAACTTTGACTTTGGTTCTGTTACCAAAGAATCTCCTGTGATCAAGGCAGTGTATGGAACTCTTTTTGAAGCGGAGCATAGATCCACATTCTACATTCCATATTGGAAATTACCTCTAGCAAAGTGGATTGTCCCTCGGCAACAAAAATTTCAAAAGGACCTCAAAGTAATCAATGATTGTCTTGATGGTCTCATTAGAAATGCAAAAGAAAGCAGAGAGGAAACAGATGTTGAGAAACTACAGCAGAGGGACTACTCTAATCTCAAGGATGCTAGTCTGCTCCGTTTTTTAGTTGATATGCGAGGAGCAGACGTAGATGATCGTCAGCTTAGGGATGACTTGATGACCATGCTTATAGCTGGGCATGAAACGACAGCTGCAGTGCTTACTTGGGCCGTATTCCTTCTTTCACAAAACCCTTCAAAAATGAAAAAAGCGCAGGCAGAGGTTGATTCAGTGCTTGGACTGGGGCGCCCAACGCTTGAATCACTTAAATCATTGGAGTACATCAGGCTGATAATCGCGGAGGCTCTTCGTTTGTATCCTCAGCCACCTTTGCTAATAAGACGGTCTCTCAGATCGGATGTTTTGCCAGGAGGTCGGAAGGGTGAAAAAGATGGTTATGCAATTCCTGCTGGCACTGATATCTTCATCTCTGTTTATAATCTTCACAGATCTCCATACTTTTGGGACAATCCTCATGAATTTGAACCAGAGCGGTTTACAGTTGAAAAGAAGAGCGAAATCGAAGGATGGTCTGGTTTCGATCCAACTCGAAGCCCCGGAGCTTTGTACCCGAACGAGGTCGTATCAGACTTTTCCTTCTTACCATTTGGTGGGGGGCCAAGAAAATGCGTGGGAGACCAATTTGCACTGATGGAATCCACTGTGGCATTGGCAATGCTGTTGCAAAAGTTCAACGTCCAGCTAAAAGGGTCGGCAGACGATGTCGAGCTCGTCACTGGTGCGACCATACATACCAAAAACGGAATGTGGTGCAAGTTGAGTACGAGAGCTGACTTAGGTTGA 1761 43.44 MAASSLSHLSLTTIDANLHRTESGFLGVSKHSHFLHSTAASSRFSSSNSKLSTVRCQSTSTDEPKTKRNLLDNASNLLTNLLSGGNLGSMPIAEGAVSDLFGRPLFFSLFDWFLEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHSLYLEAMVKVFADCTERSILKFLKLLRGIELCEGKMIELDLEAEFSNLALDIIGLSVFNFDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKLPLAKWIVPRQQKFQKDLKVINDCLDGLIRNAKESREETDVEKLQQRDYSNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLSQNPSKMKKAQAEVDSVLGLGRPTLESLKSLEYIRLIIAEALRLYPQPPLLIRRSLRSDVLPGGRKGEKDGYAIPAGTDIFISVYNLHRSPYFWDNPHEFEPERFTVEKKSEIEGWSGFDPTRSPGALYPNEVVSDFSFLPFGGGPRKCVGDQFALMESTVALAMLLQKFNVQLKGSADDVELVTGATIHTKNGMWCKLSTRADLG 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54607672 54617184 + Bda021765.1 Bda05g00641 6953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00641 586 PANTHER CYTOCHROME P450 FAMILY 4 85 582 - -
Bda05g00641 586 Gene3D Cytochrome P450 90 585 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 PRINTS P450 superfamily signature 529 540 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 PRINTS P450 superfamily signature 520 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 PRINTS P450 superfamily signature 364 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 PRINTS E-class P450 group I signature 529 552 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 PRINTS E-class P450 group I signature 353 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 PRINTS E-class P450 group I signature 373 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 PRINTS E-class P450 group I signature 113 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 PRINTS E-class P450 group I signature 519 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 522 531 IPR017972 GO:0005506|GO:0016705
Bda05g00641 586 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 85 582 - -
Bda05g00641 586 Pfam Cytochrome P450 109 577 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda05g00641 586 SUPERFAMILY Cytochrome P450 101 582 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00715 Bda-Chr3:6059948 Bda05g00641 Bda-Chr5:54607672 3.08E-92 dispersed
Bda05g00641 Bda-Chr5:54607672 Bda13g01856 Bda-Chr13:42723619 2.47E-94 dispersed
Bda05g00641 Bda-Chr5:54607672 Bda01g01076 Bda-Chr1:45403356 2.16E-154 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00641 K24543 - tcc:18612266 928.317