Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00646 ATGCAAGGCCTTCAATGGCCGGGATTGTTCCACATCCTCGCCTCCCGATCGAAGAGGATACGGTCGGTGAGAATTACCGGCTTCGGATCGTCGGTTGAGCTACTTCAGGCAACCGGACGGAGACTTGCGGATTTTGCGAGCTCTCTACGGCTGCCATTCCAATTTCATCCATATGAGGGAAAAATCGGTAATCTAACCGATCTAAGCCAACTGGAGGTTCGGCCGAACGAGGCTACGGTGGTGCACTGGATGCAGCATTGCTTGTACGACATAACGGGGAGCGATCTTGGGACGTTGAGATTATTGACTTTGCTGAGACCGAAATTGATCACCATCGTTGAACAGGATCTCACCCACGGCGACAGCTTCTTAGGGAGGTTCGTCGAGGCGTTGCATTATTACAGCGCGTTATTCGACGCGCTCGGGGATAGTTTGAGTGCGGACAGCGTAGAGAGGCATGTGGTGGAACAGCAGCTGTTCGGGTGTGAGATTAGGAACATTGTGGCCGTGAGTGGCCCCAAGAGGACCGGAGAGGTCATGGTAGAGAGGTGGGGGAACGAGCTTCGACGGGTCGGATTTCGACCTGCTTCCCTCGCCGGAAACCCTGCTGCTCAGGCGAGTTTGCTGCTGGGGATGTTCCCTTGGAGAGGGTACACTTTGGTCGAGGAAAATGGTTGCCTGAAGTTGGGTTGGAAGGATCTTTCTCTGCTCACCGCCTCCGCTTGGCAGCCAGCCGATTGA 741 54.93 MQGLQWPGLFHILASRSKRIRSVRITGFGSSVELLQATGRRLADFASSLRLPFQFHPYEGKIGNLTDLSQLEVRPNEATVVHWMQHCLYDITGSDLGTLRLLTLLRPKLITIVEQDLTHGDSFLGRFVEALHYYSALFDALGDSLSADSVERHVVEQQLFGCEIRNIVAVSGPKRTGEVMVERWGNELRRVGFRPASLAGNPAAQASLLLGMFPWRGYTLVEENGCLKLGWKDLSLLTASAWQPAD 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 54656232 54656972 - Bda021771.2 Bda05g00646 6958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00646 246 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 243 IPR005202 -
Bda05g00646 246 Pfam GRAS domain family 1 243 IPR005202 -
Bda05g00646 246 ProSiteProfiles GRAS family profile. 1 243 IPR005202 -
Bda05g00646 246 PANTHER SCARECROW-LIKE PROTEIN 23 1 243 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00646 Bda-Chr5:54656232 Bda14g01092 Bda-Chr14:9748265 2.40E-100 dispersed
Bda05g00646 Bda-Chr5:54656232 Bda01g00083 Bda-Chr1:12339467 9.60E-106 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15896 PF03514 GRAS 3.20E-70 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00646 - - zju:107404603 429.483