Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00671 CCTTCTGCGATCTTCATAATGGCAGAGCAAGAGACGTTCGCTTTCCAGGCTGAGATCAACCAGCTTCTGAGTTTGATCATTAACACTTTCTACAGCAACAAGGAGATATTTCTCCGTGAACTTATTAGCAATTCTTCCGATGCCCTGGACAAGATTAGGTTTGAGAGTCTGACGGATAAGAGTAAGCTGGATGCTCAAAATGAACTCTTCATTCACATTGTGCCTGACAAGACAAATAACACACTATCTATCATAGACAGTGGTATTGGTATGACAAAAGCTGATTTGGTGAACAATTTGGGTACAATTGCAAGGTCTGGTACCAAGGAATTTATGGAAGCTATTGCTGCTGGGGCTGATGTGAGTATGATCGGACAATTTGGTGTTGGTTTCTATTCAGCTTACCTGGTGGCGGAGAAGGTCATCGTTACCACAAAGCACAATGATGATGAACAGTATGTGTGGGAATCCCAAGCAGGAGGATCATTCACTGTCACCAGGGACTCTTCTGGTGAGAATCTTGGCAGGGGTACAAAGATAACCTTATATTTGAAGGAGGATCAACTTGAATATCTTGAGGAGCGCCGTGTGAAGGATTTAATTAAGAAGCACTCTGAGTTTATTAGCTACCCCATCTCTCTCTGGACGGAGAAGACCACTGAGAAAGAGATCTCTGATGATGAAGATGAGGAAGAGAAGAAGGAAGCAGAAGGTGAGGTTGAGGAGGTAGATGAAGAAAAGGAAAAGGAAGAGAAGAAAAAGAAGAAGATCAAGGAGGTATCATATGAGTGGTCTTTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAACCTGAAGAGATCACTAAAGAGGAGTATGCTGCATTCTACAAGAGCCTCACTAATGATTGGGAGGAGCACCTAGCGGTTAAGCATTTTTCAGTTGAGGGCCAACTTGAATTTAAGGCTGTCCTCTTTGTTCCCAAGAGGGCTCCTTTTGACCTGTTTGACACAAAGAAGAAGCCCAACAACATCAAACTGTATGTTCGTCGAGTGTTCATCATGGACAACTGCGAGGAATTGATTCCTGAGTATCTTAGCTTTGTAAAGGGCATAGTAGATTCTGAGGATTTGCCTTTGAACATCTCTAGAGAAATGCTGCAACAGAATAAGATTTTGAAGGTCATTCGCAAGAATTTGGTCAAAAAGTGCATTGAGCTCTTCTTTGAAATTGCAGAGAACAAGGAAGACTACAATAAGTTCTATGAAGCTTTCTCTAAAAACCTGAAGCTCGGCATCCATGAAGACTCCACCAATAAGACAAAGATTGCTGAGCTACTCCGATACCATTCCACCAAGAGCGGTGATGAAATGACCAGCCTGAAGGATTACGTAACCAGAATGAAGGAGGGCCAGAATGACATCTACTACATTACTGGTGAAAGCAAGAAGGCAGTTGAAAATTCTCCCTTCCTCGAGAAGCTGAAGAAAAAGGGATATGAAGTTCTCTACATGGTGGATGCCATTGACGAGTACGCAATTGGACAACTCAAGGAGTTCGAGGGAAAGAAGCTTGTCTCTGCAACTAAAGAGGGTCTGAAACTCGAGGAGACTGAGGATGAGAAGAAAAAGAAGGAAACCTTGAAGGAGAAGTTTCAAGGACTGTGCGGTGTGATCAAGGAAGTGTTGGGTGACAAAGTAGAGAAGGTAGTGGTCTCTGACCGAGTTGTTGACTCTCCCTGCTGTCTGGTGACGGGTGAGTATGGATGGACGGCAAACATGGAGAGGATCATGAAAGCTCAGGCATTGAGAGATAACAACATGGCTGGCTACATGTCAAGCAAGAAAACAATGGAGATAAACCCGGATAATCCGATCATGGAGGAGCTGAGGAAGAGAGCTGATGCAGACAAGAACGACAAGTCAGTGAAGGACCTGGTTCTGCTCCTCTTCGAGACCTCCCTTCTCACCTCTGGGTTTAGCCTTGAAGACCCCAACACCTTCGGAAACAGGATCCACAGGATGTTGAAGCTTGGCCTCAGCATCGACGATGATGGTGCTGATGGAGATGCCGATGCGGACATGCCACCCTTGGAGGATGCAGATGTTGATGCCGAGGGCAGCAAGATGGAAGAAGTTGACTAA 2124 44.68 PSAIFIMAEQETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQNELFIHIVPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDSSGENLGRGTKITLYLKEDQLEYLEERRVKDLIKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKEAEGEVEEVDEEKEKEEKKKKKIKEVSYEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEELIPEYLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCIELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNKTKIAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLEETEDEKKKKETLKEKFQGLCGVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNNMAGYMSSKKTMEINPDNPIMEELRKRADADKNDKSVKDLVLLLFETSLLTSGFSLEDPNTFGNRIHRMLKLGLSIDDDGADGDADADMPPLEDADVDAEGSKMEEVD 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 55026059 55028975 + Bda021803.1 Bda05g00671 6983

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00671 707 PANTHER HEAT SHOCK PROTEIN 81-2 7 705 - -
Bda05g00671 707 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 10 219 IPR036890 -
Bda05g00671 707 Coils Coil 528 548 - -
Bda05g00671 707 MobiDBLite consensus disorder prediction 220 250 - -
Bda05g00671 707 MobiDBLite consensus disorder prediction 223 245 - -
Bda05g00671 707 PRINTS 90kDa heat shock protein signature 11 31 IPR020575 -
Bda05g00671 707 PRINTS 90kDa heat shock protein signature 176 193 IPR020575 -
Bda05g00671 707 PRINTS 90kDa heat shock protein signature 194 212 IPR020575 -
Bda05g00671 707 PRINTS 90kDa heat shock protein signature 99 116 IPR020575 -
Bda05g00671 707 PRINTS 90kDa heat shock protein signature 81 98 IPR020575 -
Bda05g00671 707 PRINTS 90kDa heat shock protein signature 124 146 IPR020575 -
Bda05g00671 707 PRINTS 90kDa heat shock protein signature 32 54 IPR020575 -
Bda05g00671 707 PIRSF HSP90_HTPG 3 707 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bda05g00671 707 Gene3D - 8 234 IPR036890 -
Bda05g00671 707 Coils Coil 217 263 - -
Bda05g00671 707 Gene3D - 268 436 - -
Bda05g00671 707 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 187 IPR003594 -
Bda05g00671 707 Gene3D - 437 523 - -
Bda05g00671 707 Hamap Chaperone protein HtpG [htpG]. 8 670 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bda05g00671 707 ProSitePatterns Heat shock hsp90 proteins family signature. 31 40 IPR019805 GO:0005524|GO:0006457|GO:0051082
Bda05g00671 707 SMART HKATPase_4 33 188 IPR003594 -
Bda05g00671 707 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 7 705 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bda05g00671 707 SUPERFAMILY Ribosomal protein S5 domain 2-like 269 524 IPR020568 -
Bda05g00671 707 SUPERFAMILY HSP90 C-terminal domain 548 669 IPR037196 -
Bda05g00671 707 MobiDBLite consensus disorder prediction 678 707 - -
Bda05g00671 707 Gene3D - 524 673 IPR037196 -
Bda05g00671 707 Pfam Hsp90 protein 190 686 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bda05g00671 707 CDD HATPase_Hsp90-like 20 208 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00671 K04079 HSP90A, htpG; molecular chaperone HtpG - sind:105170469 1181.78
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda05g00671 Bda12g00984 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00671 Bda-Chr5:55026059 Bda15g00711 Bda-Chr15:10518789 0 dispersed
Bda01g01534 Bda-Chr1:51284244 Bda05g00671 Bda-Chr5:55026059 0 transposed
Bda04g01289 Bda-Chr4:63385884 Bda05g00671 Bda-Chr5:55026059 4.72E-141 transposed
Bda12g00984 Bda-Chr12:40972661 Bda05g00671 Bda-Chr5:55026059 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g722 . . . . Bpe09g00109 Bpe08g01086 . . Cmo16g01031 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo10g00880 Bda05g00671 Bda12g00984 . Bpe03g00745 Bma07g01240 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000587 3 3 3 2 4 2 5 5 4 3 3 3 4 4 3 4 3 7 3 3 3 4 5 0 4 3 1 4 4 3 102
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda05g00671 Bda_Chr05 FPKM 1.514367 1.79187 2.08403 1.957169 2.095802 2.128354 1.731506 1.529634 2.200532