Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda05g00678 ATGGCTTCCAAATCTGGCGCCAAAGATCCCTTGGAGATTAGCAAATCAAGCAAATCAGAACTAGTCGCCCAGAAAGATGGTGCATCAGAGGAAGAAGTCCCCCAGCCAAATTCCTTAGCTGATCAACTACAATCAAATTTATCCATTCCTGAGAGAACCCGTGTTCCAACCGATGTAAAGGAGACAGGAGGAGCAGAGGAAGGTGTCGATGATCAAAAGAAGGAAACGTCAGCACAAGAAACCAGAGCTGAAACGAGTGACGGACCAAAGAGTCGAGCCGAGTTTGTGGAGAGTGGGAAGAACAGTATTTGTAGGGGCAGCACAAGCAGTGACATGAGTGATGAGAGTACATGTAGTAGTTTAAGTAGCACAATTAGCAAGCCTCACAAGGCAAACGATGTTAGATGGGAAGCAATTCAGGCAGTTCGTGCCAAAGTCGGCGCATTGGGTGTAAGCCATTTCAGACCCTTGAAGAGATTGGGGTGTGGAGATATTGGATCTGTTTATCTGTCAGAATTGAGAGGGACAAAGTGCTATTTTGCCATGAAGGTTATGGACAAAGAATCTCTAGCCGGACGGAAGAAGCTACTTCGAGCTCAGACGGAAAGAGAGATACTTCAATCGTTAGACCATCCCTTCCTGCCTACTTTGTATACTCATTTTGAGACTGATAAGCTATCTTGTTTAGTAATGGAGTTTTGCCCTGGTGGTGACTTGCACACTCTTCGACAGAGACAACCCGGGAAATATTTTTCAGAACAAGCTGTCAAGTTTTATGTGGCAGAAATTCTCCTTGCTCTGGAGTATCTCCACATGCTTGGAATTATTTACCGGGACCTGAAGCCAGAAAATGTTCTTGTGAGAGAGGATGGTCATATTATGCTCTCTGACTTTGACCTCTCACTTCGTTGTGCTTTTAGCCCAACATTAGTGAGGTCGTCTGCTCCGGAGTCCGACCCCTTGAGGAGGAACCCAGCTTATTGCGTCCAACCAGCTTGCATTGCACCTTCTTGCATTCAACCTTCATGTGTAGTTCCGACAACTTGCTTTTCGCCTCGTCTCCTCTTAAGTAGATCTAAAAAGGAGCGAAAACCCAAAACTGAAGCTGGAAACCAAGTCAGCCCATTGCCGGAACTGATTGCCGAGCCTACAAATGCTCGATCGATGTCATTTGTTGGAACCCACGAGTACTTGGCACCTGAAATCATCAAAGGTGAAGGCCATGGTAGTGCTGTCGATTGGTGGACTTTTGGCATCTTTCTCTACGAGCTTTTGTTCGGTAAAACTCCGTTCAAAGGGTCGGGCAATCGAGCCACCCTTTTCAATGTTGTTGGTCAACCTTTACGCTTTCCAGATTCACCGGTGGTCAGCTTTTCAGCGAGGGATTTGATTAGAGGTTTACTTGTTAAGGAGCCTCAGCATCGATTGGCTTACAAAAGGGGTGCAACTGAAATTAAACAGCACCCATTTTTCGAAGGTGTTAATTGGGCGCTCGTTAGGTGTGCTAGCCCGCCTGAAATTCCTAAACCAGTTGAAATCGAAAGAATTCCAGTTTCAACATCGACAACCAGTGGCAAAGGTACTTCTTCTTGCCCTGGTCAAAGTAACTATTTGGAATTTGATTTCTTCTAA 1632 45.65 MASKSGAKDPLEISKSSKSELVAQKDGASEEEVPQPNSLADQLQSNLSIPERTRVPTDVKETGGAEEGVDDQKKETSAQETRAETSDGPKSRAEFVESGKNSICRGSTSSDMSDESTCSSLSSTISKPHKANDVRWEAIQAVRAKVGALGVSHFRPLKRLGCGDIGSVYLSELRGTKCYFAMKVMDKESLAGRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKLSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEILLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAFSPTLVRSSAPESDPLRRNPAYCVQPACIAPSCIQPSCVVPTTCFSPRLLLSRSKKERKPKTEAGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPDSPVVSFSARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALVRCASPPEIPKPVEIERIPVSTSTTSGKGTSSCPGQSNYLEFDFF 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 55076302 55078130 + Bda021812.1 Bda05g00678 6990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda05g00678 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Bda05g00678 543 SMART serkin_6 154 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00678 543 PANTHER FLIPPASE KINASE 1-RELATED 16 543 - -
Bda05g00678 543 MobiDBLite consensus disorder prediction 101 124 - -
Bda05g00678 543 Gene3D Phosphorylase Kinase; domain 1 153 237 - -
Bda05g00678 543 MobiDBLite consensus disorder prediction 35 52 - -
Bda05g00678 543 MobiDBLite consensus disorder prediction 54 94 - -
Bda05g00678 543 Pfam Protein kinase domain 388 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00678 543 Pfam Protein kinase domain 156 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00678 543 ProSiteProfiles Protein kinase domain profile. 154 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda05g00678 543 SUPERFAMILY Protein kinase-like (PK-like) 132 521 IPR011009 -
Bda05g00678 543 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 16 543 - -
Bda05g00678 543 Gene3D Transferase(Phosphotransferase) domain 1 238 340 - -
Bda05g00678 543 Gene3D Transferase(Phosphotransferase) domain 1 385 509 - -
Bda05g00678 543 MobiDBLite consensus disorder prediction 1 124 - -
Bda05g00678 543 CDD STKc_phototropin_like 152 514 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00716 Bda-Chr2:48004703 Bda05g00678 Bda-Chr5:55076302 0 dispersed
Bda03g00708 Bda-Chr3:6018392 Bda05g00678 Bda-Chr5:55076302 4.85E-145 dispersed
Bda05g00678 Bda-Chr5:55076302 Bda13g01631 Bda-Chr13:39798999 0 dispersed
Bda01g00048 Bda-Chr1:6834613 Bda05g00678 Bda-Chr5:55076302 0 transposed
Bda01g01862 Bda-Chr1:54733096 Bda05g00678 Bda-Chr5:55076302 1.68E-148 transposed
Bda07g00847 Bda-Chr7:9920701 Bda05g00678 Bda-Chr5:55076302 0 transposed
Bda12g00974 Bda-Chr12:40896033 Bda05g00678 Bda-Chr5:55076302 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69632 PF00069 Pkinase 3.60E-37 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda05g00678 K08286 - jre:108994691 832.787