Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda05g00678 | ATGGCTTCCAAATCTGGCGCCAAAGATCCCTTGGAGATTAGCAAATCAAGCAAATCAGAACTAGTCGCCCAGAAAGATGGTGCATCAGAGGAAGAAGTCCCCCAGCCAAATTCCTTAGCTGATCAACTACAATCAAATTTATCCATTCCTGAGAGAACCCGTGTTCCAACCGATGTAAAGGAGACAGGAGGAGCAGAGGAAGGTGTCGATGATCAAAAGAAGGAAACGTCAGCACAAGAAACCAGAGCTGAAACGAGTGACGGACCAAAGAGTCGAGCCGAGTTTGTGGAGAGTGGGAAGAACAGTATTTGTAGGGGCAGCACAAGCAGTGACATGAGTGATGAGAGTACATGTAGTAGTTTAAGTAGCACAATTAGCAAGCCTCACAAGGCAAACGATGTTAGATGGGAAGCAATTCAGGCAGTTCGTGCCAAAGTCGGCGCATTGGGTGTAAGCCATTTCAGACCCTTGAAGAGATTGGGGTGTGGAGATATTGGATCTGTTTATCTGTCAGAATTGAGAGGGACAAAGTGCTATTTTGCCATGAAGGTTATGGACAAAGAATCTCTAGCCGGACGGAAGAAGCTACTTCGAGCTCAGACGGAAAGAGAGATACTTCAATCGTTAGACCATCCCTTCCTGCCTACTTTGTATACTCATTTTGAGACTGATAAGCTATCTTGTTTAGTAATGGAGTTTTGCCCTGGTGGTGACTTGCACACTCTTCGACAGAGACAACCCGGGAAATATTTTTCAGAACAAGCTGTCAAGTTTTATGTGGCAGAAATTCTCCTTGCTCTGGAGTATCTCCACATGCTTGGAATTATTTACCGGGACCTGAAGCCAGAAAATGTTCTTGTGAGAGAGGATGGTCATATTATGCTCTCTGACTTTGACCTCTCACTTCGTTGTGCTTTTAGCCCAACATTAGTGAGGTCGTCTGCTCCGGAGTCCGACCCCTTGAGGAGGAACCCAGCTTATTGCGTCCAACCAGCTTGCATTGCACCTTCTTGCATTCAACCTTCATGTGTAGTTCCGACAACTTGCTTTTCGCCTCGTCTCCTCTTAAGTAGATCTAAAAAGGAGCGAAAACCCAAAACTGAAGCTGGAAACCAAGTCAGCCCATTGCCGGAACTGATTGCCGAGCCTACAAATGCTCGATCGATGTCATTTGTTGGAACCCACGAGTACTTGGCACCTGAAATCATCAAAGGTGAAGGCCATGGTAGTGCTGTCGATTGGTGGACTTTTGGCATCTTTCTCTACGAGCTTTTGTTCGGTAAAACTCCGTTCAAAGGGTCGGGCAATCGAGCCACCCTTTTCAATGTTGTTGGTCAACCTTTACGCTTTCCAGATTCACCGGTGGTCAGCTTTTCAGCGAGGGATTTGATTAGAGGTTTACTTGTTAAGGAGCCTCAGCATCGATTGGCTTACAAAAGGGGTGCAACTGAAATTAAACAGCACCCATTTTTCGAAGGTGTTAATTGGGCGCTCGTTAGGTGTGCTAGCCCGCCTGAAATTCCTAAACCAGTTGAAATCGAAAGAATTCCAGTTTCAACATCGACAACCAGTGGCAAAGGTACTTCTTCTTGCCCTGGTCAAAGTAACTATTTGGAATTTGATTTCTTCTAA | 1632 | 45.65 | MASKSGAKDPLEISKSSKSELVAQKDGASEEEVPQPNSLADQLQSNLSIPERTRVPTDVKETGGAEEGVDDQKKETSAQETRAETSDGPKSRAEFVESGKNSICRGSTSSDMSDESTCSSLSSTISKPHKANDVRWEAIQAVRAKVGALGVSHFRPLKRLGCGDIGSVYLSELRGTKCYFAMKVMDKESLAGRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKLSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEILLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAFSPTLVRSSAPESDPLRRNPAYCVQPACIAPSCIQPSCVVPTTCFSPRLLLSRSKKERKPKTEAGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPDSPVVSFSARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALVRCASPPEIPKPVEIERIPVSTSTTSGKGTSSCPGQSNYLEFDFF | 543 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 55076302 | 55078130 | + | Bda021812.1 | Bda05g00678 | 6990 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda05g00678 | 543 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 275 | 287 | IPR008271 | GO:0004672|GO:0006468 | |
Bda05g00678 | 543 | SMART | serkin_6 | 154 | 491 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda05g00678 | 543 | PANTHER | FLIPPASE KINASE 1-RELATED | 16 | 543 | - | - | |
Bda05g00678 | 543 | MobiDBLite | consensus disorder prediction | 101 | 124 | - | - | |
Bda05g00678 | 543 | Gene3D | Phosphorylase Kinase; domain 1 | 153 | 237 | - | - | |
Bda05g00678 | 543 | MobiDBLite | consensus disorder prediction | 35 | 52 | - | - | |
Bda05g00678 | 543 | MobiDBLite | consensus disorder prediction | 54 | 94 | - | - | |
Bda05g00678 | 543 | Pfam | Protein kinase domain | 388 | 491 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda05g00678 | 543 | Pfam | Protein kinase domain | 156 | 305 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda05g00678 | 543 | ProSiteProfiles | Protein kinase domain profile. | 154 | 491 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda05g00678 | 543 | SUPERFAMILY | Protein kinase-like (PK-like) | 132 | 521 | IPR011009 | - | |
Bda05g00678 | 543 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 16 | 543 | - | - | |
Bda05g00678 | 543 | Gene3D | Transferase(Phosphotransferase) domain 1 | 238 | 340 | - | - | |
Bda05g00678 | 543 | Gene3D | Transferase(Phosphotransferase) domain 1 | 385 | 509 | - | - | |
Bda05g00678 | 543 | MobiDBLite | consensus disorder prediction | 1 | 124 | - | - | |
Bda05g00678 | 543 | CDD | STKc_phototropin_like | 152 | 514 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00716 | Bda-Chr2:48004703 | Bda05g00678 | Bda-Chr5:55076302 | 0 | dispersed | |
Bda03g00708 | Bda-Chr3:6018392 | Bda05g00678 | Bda-Chr5:55076302 | 4.85E-145 | dispersed | |
Bda05g00678 | Bda-Chr5:55076302 | Bda13g01631 | Bda-Chr13:39798999 | 0 | dispersed | |
Bda01g00048 | Bda-Chr1:6834613 | Bda05g00678 | Bda-Chr5:55076302 | 0 | transposed | |
Bda01g01862 | Bda-Chr1:54733096 | Bda05g00678 | Bda-Chr5:55076302 | 1.68E-148 | transposed | |
Bda07g00847 | Bda-Chr7:9920701 | Bda05g00678 | Bda-Chr5:55076302 | 0 | transposed | |
Bda12g00974 | Bda-Chr12:40896033 | Bda05g00678 | Bda-Chr5:55076302 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69632 | PF00069 | Pkinase | 3.60E-37 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda05g00678 | K08286 | - | jre:108994691 | 832.787 |